prot_E-siliculosus-1a_F_contig1470.2760.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1470.2760.1
Unique Nameprot_E-siliculosus-1a_F_contig1470.2760.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length262
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1470.2760.1 vs. uniprot
Match: D7FGV7_ECTSI (Similar to PHD finger family protein, partial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGV7_ECTSI)

HSP 1 Score: 390 bits (1001), Expect = 2.190e-133
Identity = 246/258 (95.35%), Postives = 250/258 (96.90%), Query Frame = 0
Query:    1 MAPPQRPGSGWLQNANGNKNQPTLAPTPDQSEVTRTAPLPEELIARTEGGVSKEXXXXXXXXXXXXXXXXXXXXXXXXXXMCAICCDKLPNLERGVLSCGHVFCFACIHQWTKNSSICPGCRVQIKRITKTLSPADEAKAKGETRKPVVFQRGIKQKTRKQLKRARHRDSRAKNPAAGFVTKTVRVRPKSLKMTPAQQRAAPHPQAPGGWMYVQEXXXXXXXXXXXXXXXRRVIQPALARGALSESMTHADAADLSPQ 258
            MAPPQRPGSGWLQNANG+KNQPTLAPTPDQSEVTRTAPLPEELIARTEG VSKEXXXXXXXXXXXXXXXXXXXXXXXXXXMCAICCDKLPNLERGVLSCGHVFCFACIHQWTKNSSICPGCRVQIKRITKTLSPADEAKAKGETRKPVV QRG+K+K RKQLKRARHRDSRAKNPA+GFVTKTVRVRPKSLKMTPAQQRAAPHPQA GGWMYVQE XXXXXXXXXXXXXX RVIQPALARGALSESMT A AADLSPQ
Sbjct:   96 MAPPQRPGSGWLQNANGSKNQPTLAPTPDQSEVTRTAPLPEELIARTEG-VSKEXXXXXXXXXXXXXXXXXXXXXXXXXXMCAICCDKLPNLERGVLSCGHVFCFACIHQWTKNSSICPGCRVQIKRITKTLSPADEAKAKGETRKPVVSQRGMKKKPRKQLKRARHRDSRAKNPASGFVTKTVRVRPKSLKMTPAQQRAAPHPQARGGWMYVQEQXXXXXXXXXXXXXXARVIQPALARGALSESMTQAGAADLSPQ 352          
BLAST of mRNA_E-siliculosus-1a_F_contig1470.2760.1 vs. uniprot
Match: A0A6H5K2A7_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2A7_9PHAE)

HSP 1 Score: 365 bits (938), Expect = 1.390e-124
Identity = 238/303 (78.55%), Postives = 242/303 (79.87%), Query Frame = 0
Query:    1 MAPPQRPGSGWLQNANGNKNQPTLAPTPDQSEVTRTAPLPEELIARTEGGVSKEXXXXXXXXXXXXXXXXXXXXXXXXXXMCAICCDKLPNLERGVLSCGHVFCFACIHQWTKNSSICPGCRVQIKRITKTLSPADEAKAKGETRKPV------------------------------------VFQRGIKQKTRKQLKRARHRDSRAKNPAAGFVTKTVRVRPKSLKMTPAQQRAAPHPQAPGGWMYVQEXXXXXXXXXXXXXXXR-------RVIQPALARGALSESMTHADAADLSPQEV 260
            MAPPQRPGSGWLQNANGNKNQPTLAPTPDQSEVTRTAPLPEELIARTEG VSKE         XXXXXXXXXXXXXXXX MCAICCDKLP+LERGVLSCGHVFCFACIHQWTKNSSICPGCRVQIKRITKTLSPADEAK+KGETRKPV                                    V QRG+K+K RKQLKRAR RDSRAKNPAAGFVTKTVRVRPKSLKMTPAQQRAAPHPQAPGGWMYVQE XXXXXXXXXXXXXX        RVIQPALARGAL ESMT ADAADLSPQEV
Sbjct:    1 MAPPQRPGSGWLQNANGNKNQPTLAPTPDQSEVTRTAPLPEELIARTEG-VSKEEEARRVERAXXXXXXXXXXXXXXXX-MCAICCDKLPDLERGVLSCGHVFCFACIHQWTKNSSICPGCRVQIKRITKTLSPADEAKSKGETRKPVSLAVTRQRGWRSLFLPVERAFRLCLFARFLGPLFLVVSQRGMKKKVRKQLKRARRRDSRAKNPAAGFVTKTVRVRPKSLKMTPAQQRAAPHPQAPGGWMYVQEQXXXXXXXXXXXXXXXXXXXXXARVIQPALARGALPESMTQADAADLSPQEV 301          
BLAST of mRNA_E-siliculosus-1a_F_contig1470.2760.1 vs. uniprot
Match: D7FGW0_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGW0_ECTSI)

HSP 1 Score: 97.8 bits (242), Expect = 2.000e-19
Identity = 65/200 (32.50%), Postives = 86/200 (43.00%), Query Frame = 0
Query:   16 NGNKNQPTLAPTPDQSEVTRTAPLPE-ELIARTEGGVSKEXXXXXXXXXXXXXXXXXXXXXXXXXXMCAICCDKLPNLERGVLSCGHVFCFACIHQWTKN---SSICPGCRVQIKRITKTLSPADEAKAKGETRKPVVFQRGIKQKTRKQLKRARHRDSRAKNPAAGFVTKTVRVRPKSLKMTPAQQRAAPHPQAPGGWM 211
            N NK  P LAP   +S +T+  P P  E + RT    + +                          +C IC + LP++ERG+++CGH FCF CIH W  N   S++CP CR    +I KTLSP D  K K    +                 RA    +R K P      K VRVR  S K    ++    HP+A GG M
Sbjct:   12 NNNKRHPALAPFLPKSLITKKIPAPHPEDVERTRKAAADDAKKGE---------------------LCIICLEALPDIERGIIACGHTFCFGCIHDWASNRGDSALCPSCRFPFNKIKKTLSPKDIEKEKLRNERDXXXXXXXXXXXXXXXXRA----ARVKQPVDKIFVKDVRVRKMSKKKQAIEEARTVHPEAAGGSM 186          
BLAST of mRNA_E-siliculosus-1a_F_contig1470.2760.1 vs. uniprot
Match: D8LMP5_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMP5_ECTSI)

HSP 1 Score: 95.5 bits (236), Expect = 1.310e-18
Identity = 57/136 (41.91%), Postives = 74/136 (54.41%), Query Frame = 0
Query:   82 CAICCDKLPNLERGVLSCGHVFCFACIHQWTKNS-SICPGCRVQIKRITKTLSPADEAKAKGETRKPVVFQRGIKQKTRKQLKRARHRDSRAKN-PAAGFVTKTVRVRPKSLKMTPAQQRAAPHPQAPGGWMYVQE 215
            C IC D LP   RG++ CGHVFC  C+ QW K   + CP CR ++  I KTLS A EA  K   RKP+         T+ QLKR + + +  K  P     T+ +RV  K  +    Q   APHPQAPGG+++ QE
Sbjct:   57 CPICQDLLPEENRGIVKCGHVFCLKCVLQWVKKQQNSCPTCRAKVCHIKKTLSLA-EALEKNANRKPL---------TKAQLKRTKRKSTIGKPFPKPDITTEKIRVHKKVSREQIRQNAMAPHPQAPGGFLHAQE 182          
BLAST of mRNA_E-siliculosus-1a_F_contig1470.2760.1 vs. uniprot
Match: A0A6H5JQU9_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQU9_9PHAE)

HSP 1 Score: 91.3 bits (225), Expect = 3.710e-17
Identity = 59/149 (39.60%), Postives = 76/149 (51.01%), Query Frame = 0
Query:   82 CAICCDKLPNLERGVLSCGHVFCFACIHQWTKNS-SICPGCRVQIKRITKTLSPADEAKAKGETRKPVVFQRGIKQKTRKQLKRARHRDSRAKNPAAG--------------FVTKTVRVRPKSLKMTPAQQRAAPHPQAPGGWMYVQE 215
            C IC D LP   RG+L CGHVFC  C+ QW K   + CP CR ++  I +TLS A EA  K   RKP           + QLKRA+ + +  K P+ G                T+ +RVR K  +    Q   APHPQAPGG+++ QE
Sbjct:   81 CPICQDLLPEENRGILKCGHVFCLKCVLQWVKKQQNSCPTCRAEVCHIKRTLSSA-EALEKNADRKPP---------RKAQLKRAKRKSAVGK-PSPGDRYSESDVLQQKPDITTEKIRVRKKVSREQIRQNATAPHPQAPGGFLHAQE 218          
BLAST of mRNA_E-siliculosus-1a_F_contig1470.2760.1 vs. uniprot
Match: D8LMP4_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMP4_ECTSI)

HSP 1 Score: 85.9 bits (211), Expect = 4.230e-16
Identity = 55/134 (41.04%), Postives = 73/134 (54.48%), Query Frame = 0
Query:   82 CAICCDKLPNLERGVLSCGHVFCFACIHQWTKNSSICPGCRVQIKRITKTLSPADEAKAKGETRKPVVFQRGIKQKTRKQLKRARHRDSRAKNPAAGF---------VTKTVRVRPKS-LKMTPAQQRAAPHPQ 205
            C IC   LP+ ERG+L C HVFCF CIH+WTK  S CP CRV+++ ITKTLS  +  +    T       R     T+ Q+KRAR +  + + PA+           VTK VRV+ ++ +K        APHPQ
Sbjct:   41 CPICQGLLPDEERGILRCNHVFCFKCIHKWTKTESACPVCRVEVRSITKTLSLREIEQFNVRTPHDPSQVR-----TKAQIKRARAKRFKCRKPASVVFDDIYIPFTVTKAVRVKLRTQMKEMNRLLADAPHPQ 169          
BLAST of mRNA_E-siliculosus-1a_F_contig1470.2760.1 vs. uniprot
Match: A0A6H5L829_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L829_9PHAE)

HSP 1 Score: 87.0 bits (214), Expect = 8.610e-16
Identity = 59/198 (29.80%), Postives = 80/198 (40.40%), Query Frame = 0
Query:   18 NKNQPTLAPTPDQSEVTRTAPLPE-ELIARTEGGVSKEXXXXXXXXXXXXXXXXXXXXXXXXXXMCAICCDKLPNLERGVLSCGHVFCFACIHQWTKNSS---ICPGCRVQIKRITKTLSPADEAKAKGETRKPVVFQRGIKQKTRKQLKRARHRDSRAKNPAAGFVTKTVRVRPKSLKMTPAQQRAAPHPQAPGGWM 211
            NK  P LAP   +S +T+  P P  E + RT+   + +                          +C IC + LP++ERG+++CGH FCF CIH W+  S    +CP CRV   +I KTLSP D  K K                               +N       K +RVR  S K    ++    HP A GG M
Sbjct:   14 NKRHPALAPVLPKSLITKKIPAPHPEDVERTKKAAADDAKKGE---------------------LCIICQEALPDIERGIIACGHTFCFGCIHTWSSRSGDSVLCPSCRVPFNKIKKTLSPKDVEKEK------------------------------LRNEVDKIFVKDIRVRKMSKKKKAIEEARTLHPDAAGGSM 160          
BLAST of mRNA_E-siliculosus-1a_F_contig1470.2760.1 vs. uniprot
Match: A0A1R2BZC3_9CILI (RING-type domain-containing protein n=2 Tax=Stentor coeruleus TaxID=5963 RepID=A0A1R2BZC3_9CILI)

HSP 1 Score: 57.0 bits (136), Expect = 6.130e-7
Identity = 23/50 (46.00%), Postives = 37/50 (74.00%), Query Frame = 0
Query:   81 MCAICCDKLPNLERGVLSCGHVFCFACIHQWTKNSSICPGCRVQIKRITK 130
            +CAIC +++  L+  V SCGH+FCF+CIH+W++  + CP C+ +  +ITK
Sbjct:   11 LCAICYNQI-ELQGCVDSCGHLFCFSCIHKWSETENTCPICKARFFKITK 59          
BLAST of mRNA_E-siliculosus-1a_F_contig1470.2760.1 vs. uniprot
Match: A0A8C4VBF4_FALTI (RING-type domain-containing protein n=1 Tax=Falco tinnunculus TaxID=100819 RepID=A0A8C4VBF4_FALTI)

HSP 1 Score: 51.6 bits (122), Expect = 2.910e-5
Identity = 20/48 (41.67%), Postives = 31/48 (64.58%), Query Frame = 0
Query:   81 MCAICCDKLPNLERGVLSCGHVFCFACIHQWTKNSSICPGCRVQIKRI 128
            MC IC D + + E  +  C H+FCFACI +W++ +++CP CR   + I
Sbjct:   32 MCTICQDTITD-EASINQCSHIFCFACILEWSRRNAVCPICRCPFQYI 78          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1470.2760.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
D7FGV7_ECTSI2.190e-13395.35Similar to PHD finger family protein, partial n=1 ... [more]
A0A6H5K2A7_9PHAE1.390e-12478.55RING-type domain-containing protein n=1 Tax=Ectoca... [more]
D7FGW0_ECTSI2.000e-1932.50RING-type domain-containing protein n=1 Tax=Ectoca... [more]
D8LMP5_ECTSI1.310e-1841.91RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JQU9_9PHAE3.710e-1739.60RING-type domain-containing protein n=1 Tax=Ectoca... [more]
D8LMP4_ECTSI4.230e-1641.04RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5L829_9PHAE8.610e-1629.80RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A1R2BZC3_9CILI6.130e-746.00RING-type domain-containing protein n=2 Tax=Stento... [more]
A0A8C4VBF4_FALTI2.910e-541.67RING-type domain-containing protein n=1 Tax=Falco ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 51..81
NoneNo IPR availablePANTHERPTHR12109:SF3RING FINGER PROTEIN 141coord: 65..133
NoneNo IPR availablePANTHERPTHR12109FAMILY NOT NAMEDcoord: 65..133
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 75..130
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 82..121
e-value: 6.8E-5
score: 32.3
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 81..122
e-value: 6.9E-9
score: 35.9
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 82..122
score: 13.006
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 44..143
e-value: 3.8E-15
score: 57.4
IPR017907Zinc finger, RING-type, conserved sitePROSITEPS00518ZF_RING_1coord: 99..108

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1470contigE-siliculosus-1a_F_contig1470:26010..31409 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1470.2760.1mRNA_E-siliculosus-1a_F_contig1470.2760.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1470 26010..31409 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1470.2760.1 ID=prot_E-siliculosus-1a_F_contig1470.2760.1|Name=mRNA_E-siliculosus-1a_F_contig1470.2760.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=262bp
MAPPQRPGSGWLQNANGNKNQPTLAPTPDQSEVTRTAPLPEELIARTEGG
VSKEEEEARRVERAKKAAEESKKREREEEEMCAICCDKLPNLERGVLSCG
HVFCFACIHQWTKNSSICPGCRVQIKRITKTLSPADEAKAKGETRKPVVF
QRGIKQKTRKQLKRARHRDSRAKNPAAGFVTKTVRVRPKSLKMTPAQQRA
APHPQAPGGWMYVQEQQQRLQQQQLSSSSSRRVIQPALARGALSESMTHA
DAADLSPQEVSL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR017907Znf_RING_CS
IPR013083Znf_RING/FYVE/PHD
IPR001841Znf_RING