prot_E-siliculosus-1a_F_contig1458.2678.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1458.2678.1
Unique Nameprot_E-siliculosus-1a_F_contig1458.2678.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length230
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1458.2678.1 vs. uniprot
Match: D8LLI7_ECTSI (RING-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LLI7_ECTSI)

HSP 1 Score: 386 bits (992), Expect = 9.240e-133
Identity = 190/198 (95.96%), Postives = 193/198 (97.47%), Query Frame = 0
Query:   33 AMAASSGGAAGSGPARGGGGAPDRAAVSVCDLCNMRRADLRGPCGHKYHARCIYAMPITRCPVCDQAFPNSNDGGLLILPVEPFSNAGGATGESEDDSRKGAREGAETQTRTGRWHSFETMYAQRIVADFDAGTLPLCEGTKLGNLLCNILNCSPSRLSKKLKIGKKCFQQREDRPMTPEHIARHREAQKRLSDLEEV 230
            AMAA SGG AGSG ARGGGGAPDRA VSVCDLCNMRRADLRGPCGHKYHARCIYAMPITRCPVCDQAFPN+NDGGLLILPVEPFS+AGGATGESEDDSR GAREGAETQTRTGRWHSFETMYAQRIVADFDAGTLPLCEGTKLGNLLCNILNCSPSRLSKKLKIGKKCFQQREDRPMTPEHIARHREAQKRLSDLEE+
Sbjct:    6 AMAAPSGGVAGSGQARGGGGAPDRAVVSVCDLCNMRRADLRGPCGHKYHARCIYAMPITRCPVCDQAFPNTNDGGLLILPVEPFSDAGGATGESEDDSRTGAREGAETQTRTGRWHSFETMYAQRIVADFDAGTLPLCEGTKLGNLLCNILNCSPSRLSKKLKIGKKCFQQREDRPMTPEHIARHREAQKRLSDLEEM 203          
BLAST of mRNA_E-siliculosus-1a_F_contig1458.2678.1 vs. uniprot
Match: A0A6H5KFM7_9PHAE (RING-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFM7_9PHAE)

HSP 1 Score: 259 bits (662), Expect = 3.420e-80
Identity = 130/171 (76.02%), Postives = 141/171 (82.46%), Query Frame = 0
Query:   60 SVCDLCNMRRADLRGPCGHKYHARCIYAMPITRCPVCDQAFPNSNDGGLLILPVEPFSNAGGATGESEDDSRKGAREGAETQTRTGRWHSFETMYAQRIVADFDAGTLPLCEGTKLGNLLCNILNCSPSRLSKKLKIGKKCFQQREDRPMTPEHIARHREAQKRLSDLEEV 230
            +VCDLCN+RRADLRGPCGHKYHARCIY+MPI RCPVCD  F   ND GL ILPVEP+S    AT   E+D RKG     E Q+RTGRWHS+ETMYAQRIVADFDAGT+PL EGTKLGN LCNILNCSPSRLSKKLKIGKK FQ+   RPM  EHIA+HREAQKRLSDLEE+
Sbjct:   78 AVCDLCNVRRADLRGPCGHKYHARCIYSMPIVRCPVCDMDF--GNDDGLFILPVEPYS----ATNFFEEDERKGGDR--EHQSRTGRWHSYETMYAQRIVADFDAGTMPLSEGTKLGNFLCNILNCSPSRLSKKLKIGKKYFQRCPGRPMGEEHIAKHREAQKRLSDLEEM 240          
BLAST of mRNA_E-siliculosus-1a_F_contig1458.2678.1 vs. uniprot
Match: D8LER0_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LER0_ECTSI)

HSP 1 Score: 261 bits (666), Expect = 9.710e-79
Identity = 131/171 (76.61%), Postives = 142/171 (83.04%), Query Frame = 0
Query:   60 SVCDLCNMRRADLRGPCGHKYHARCIYAMPITRCPVCDQAFPNSNDGGLLILPVEPFSNAGGATGESEDDSRKGAREGAETQTRTGRWHSFETMYAQRIVADFDAGTLPLCEGTKLGNLLCNILNCSPSRLSKKLKIGKKCFQQREDRPMTPEHIARHREAQKRLSDLEEV 230
            +VCDLCN+RRADLRGPCGHKYHARCIY+MPI RCPVCD  F   ND GL ILPVEP+S    AT   E+D RKG    AE Q+RTGRWHS+ETMYAQRIVADFDAGT+PL EGTKLGN LCNILNCSPSRLSKKLKIGKK FQ+   RPM  EHIA+HREAQKRLSDLEE+
Sbjct:   78 AVCDLCNVRRADLRGPCGHKYHARCIYSMPIVRCPVCDMDF--GNDDGLFILPVEPYS----ATNLFEEDERKGRD--AEHQSRTGRWHSYETMYAQRIVADFDAGTMPLSEGTKLGNFLCNILNCSPSRLSKKLKIGKKYFQRCPGRPMGEEHIAKHREAQKRLSDLEEM 240          
BLAST of mRNA_E-siliculosus-1a_F_contig1458.2678.1 vs. uniprot
Match: A0A836CDJ8_9STRA (RING-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDJ8_9STRA)

HSP 1 Score: 180 bits (457), Expect = 8.100e-53
Identity = 89/170 (52.35%), Postives = 113/170 (66.47%), Query Frame = 0
Query:   61 VCDLCNMRRADLRGPCGHKYHARCIYAMPITRCPVCDQAFPNSNDGGLLILPVEPFSNAGGATGESEDDSRKGAREGAETQTRTGRWHSFETMYAQRIVADFDAGTLPLCEGTKLGNLLCNILNCSPSRLSKKLKIGKKCFQQREDRPMTPEHIARHREAQKRLSDLEEV 230
            VCDLC++RRAD+R PCGH  HARCIY +P++ CPVC      S   GL +LPVEP +N                 E A+T+ RTGRWH +ET YAQ ++ DF+AGTLP+ EGTKL  LLC +LNC+ +RLSKKLKIGK+ +     R  TPE IA H   Q+R+S+LEE+
Sbjct:   17 VCDLCSIRRADVRTPCGHALHARCIYQLPLSECPVCRADMTQSE--GLQVLPVEPHNNE--------------PAENADTELRTGRWHHYETQYAQHLMEDFEAGTLPIGEGTKLATLLCRLLNCNQTRLSKKLKIGKRFYAHGPTRIRTPEAIAAHSVRQRRISELEEM 170          
BLAST of mRNA_E-siliculosus-1a_F_contig1458.2678.1 vs. uniprot
Match: A0A835ZCD8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCD8_9STRA)

HSP 1 Score: 112 bits (279), Expect = 9.520e-25
Identity = 55/98 (56.12%), Postives = 73/98 (74.49%), Query Frame = 0
Query:  133 GAREGAETQTRTGRWHSFETMYAQRIVADFDAGTLPLCEGTKLGNLLCNILNCSPSRLSKKLKIGKKCFQQREDRPMTPEHIARHREAQKRLSDLEEV 230
            G R   + + RTGRWHS+ET+YAQ ++ DF+AGTLP+ EGTKL +LLC +LNC+ +RLSKKLKIGK+ +     R  T E IA HR  Q+R+S+LEE+
Sbjct:   58 GERVVCDPELRTGRWHSYETLYAQHVIDDFEAGTLPIGEGTKLASLLCRLLNCNQTRLSKKLKIGKRFYAHAPAREPTLEAIAAHRVRQRRVSELEEM 155          
BLAST of mRNA_E-siliculosus-1a_F_contig1458.2678.1 vs. uniprot
Match: A0A662WLN8_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WLN8_9STRA)

HSP 1 Score: 69.7 bits (169), Expect = 2.970e-10
Identity = 43/144 (29.86%), Postives = 61/144 (42.36%), Query Frame = 0
Query:   62 CDLCNMRRADLR-GPCGHKYHARCIYAMPITRCPVCDQAFPNSNDGGLLILPVEPFSNAGGATGESEDDSRKGAREGAETQTRTGRWHSFETMYAQRIVADFDAGTLPLCEGTKLGNLLCNILNCSPSRLSKKLK---IGKKCF 201
            CD C    A L    CGH++H RCI++ P TRC +C            +    +   N+G                      R G+W + E  YA  ++  F  G LPL +G  L   + N+L C P R++KK     IGK+ F
Sbjct:   19 CDGCKSCGAILELDGCGHRFHPRCIFSWPATRCELCAAPVTTLR----VFREFKNLQNSG---------------------VRKGKWSADEHKYANMMMKQFQLGALPLADGLHLRGFIANLLQCDPLRVTKKYAGQAIGKQNF 137          
BLAST of mRNA_E-siliculosus-1a_F_contig1458.2678.1 vs. uniprot
Match: A0A7S3M8Z7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M8Z7_9STRA)

HSP 1 Score: 58.9 bits (141), Expect = 1.870e-6
Identity = 28/63 (44.44%), Postives = 39/63 (61.90%), Query Frame = 0
Query:  143 RTGRWHSFETMYAQRIVADFDAGTLPLCEGTKLGNLLCNILNCSPSRLSKKL----KIGKKCF 201
            R G+W + E  Y ++I+ DF+ GTL + EGT L  LL  +LNC P R++KK      IGK+ F
Sbjct:   18 RRGKWTAEEERYTEKIICDFEHGTLDVPEGTTLRTLLAKVLNCDPMRITKKYTGNSSIGKRTF 80          
BLAST of mRNA_E-siliculosus-1a_F_contig1458.2678.1 vs. uniprot
Match: A0A1E7FSB3_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FSB3_9STRA)

HSP 1 Score: 58.5 bits (140), Expect = 2.560e-6
Identity = 29/67 (43.28%), Postives = 39/67 (58.21%), Query Frame = 0
Query:  141 QTRTGRWHSFETMYAQRIVADFDAGTLPLCEGTKLGNLLCNILNCSPSRLSKKLK---IGKKCFQQR 204
            Q R G W   E  YA R++ +F+AG LPL  GT L   L  +LNC P R+SKK     +G + F++R
Sbjct:  208 QLRRGNWTPEEEAYANRVIQEFEAGLLPLTNGTTLRTYLSKLLNCDPMRISKKFVGSCLGNQVFRKR 274          
BLAST of mRNA_E-siliculosus-1a_F_contig1458.2678.1 vs. uniprot
Match: A0A7S3JS85_9STRA (Hypothetical protein (Fragment) n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JS85_9STRA)

HSP 1 Score: 52.8 bits (125), Expect = 9.690e-5
Identity = 31/76 (40.79%), Postives = 44/76 (57.89%), Query Frame = 0
Query:  143 RTGRWHSFETMYAQRIVADFDAGTLPLCE-GTKLGNLLCNILNCSPSRLSKKL---KIGKKCFQQREDRPMTPEHI 214
            R G+W + E +YA++++ DF AGT+P CE G  L   L   L+C   R+SKK     IGK  F++R      PEH+
Sbjct:   70 RRGKWTAEEEVYAEQLIIDFQAGTVPNCEEGVTLRAFLAKELSCDRMRISKKYAGASIGKLIFRRR----APPEHM 141          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1458.2678.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
D8LLI7_ECTSI9.240e-13395.96RING-type domain-containing protein n=2 Tax=Ectoca... [more]
A0A6H5KFM7_9PHAE3.420e-8076.02RING-type domain-containing protein (Fragment) n=1... [more]
D8LER0_ECTSI9.710e-7976.61RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A836CDJ8_9STRA8.100e-5352.35RING-type domain-containing protein n=1 Tax=Tribon... [more]
A0A835ZCD8_9STRA9.520e-2556.12Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A662WLN8_9STRA2.970e-1029.86Uncharacterized protein n=1 Tax=Nothophytophthora ... [more]
A0A7S3M8Z7_9STRA1.870e-644.44Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
A0A1E7FSB3_9STRA2.560e-643.28Uncharacterized protein n=1 Tax=Fragilariopsis cyl... [more]
A0A7S3JS85_9STRA9.690e-540.79Hypothetical protein (Fragment) n=1 Tax=Aureoumbra... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 217..230
NoneNo IPR availablePANTHERPTHR35213FAMILY NOT NAMEDcoord: 126..198
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 61..102
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 62..96
e-value: 0.0064
score: 25.7
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 62..97
score: 9.922

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1458contigE-siliculosus-1a_F_contig1458:530..3191 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1458.2678.1mRNA_E-siliculosus-1a_F_contig1458.2678.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1458 530..3191 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1458.2678.1 ID=prot_E-siliculosus-1a_F_contig1458.2678.1|Name=mRNA_E-siliculosus-1a_F_contig1458.2678.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=230bp
MSSGHAGGGPILPNVDGSGAAGGAAEHMNIDGAMAASSGGAAGSGPARGG
GGAPDRAAVSVCDLCNMRRADLRGPCGHKYHARCIYAMPITRCPVCDQAF
PNSNDGGLLILPVEPFSNAGGATGESEDDSRKGAREGAETQTRTGRWHSF
ETMYAQRIVADFDAGTLPLCEGTKLGNLLCNILNCSPSRLSKKLKIGKKC
FQQREDRPMTPEHIARHREAQKRLSDLEEV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING