prot_E-siliculosus-1a_F_contig1454.2660.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1454.2660.1
Unique Nameprot_E-siliculosus-1a_F_contig1454.2660.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length295
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1454.2660.1 vs. uniprot
Match: D7FP86_ECTSI (Cnd1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP86_ECTSI)

HSP 1 Score: 470 bits (1209), Expect = 5.070e-150
Identity = 271/295 (91.86%), Postives = 273/295 (92.54%), Query Frame = 0
Query:    1 AKRTLLSKVALKHLMEKVVPILTALKHVLERAHSPLLREIMFYFGELFRSHKEEVKAVLASEPGLVDEIDFDLRRFEKEEYERRQKAKEXXXXXXXXXXXXXXXXXXGPPRTPSNRXXXXXXXXXASGRRGSFAGPSLRDACTPMAAVQKSARKTPFQNLGACSAVKLKASTPGTSSVFSPARPGGGGRGSRPKTPVQLRTPRQAVAAALGNSPMDTDTSPVPIRNMLSDRKANGGSSGPSRGRGEGAGGADIELASPVNPHPAKKRRWAVSVPLPAEGEDGDSGEEEFDGGGVS 295
            AKRTLLSKVALKHLMEKVVPILTALKHVLERAHSPLLREIM YFGELFRSHKEEVKAVLASEPGLVDEIDFDLRRFEKEEYERRQK   XXXXXXXXXXXXXXXXX GPPRTPSNR         ASGRRGSFAG S+RDACTPMAAVQKSARKTPFQNLGACSAVKLKASTPG SS+FSP RPGGGGRGSRPKTPVQLRTPRQAVAAALGNSPMDTDTSPVPIRNMLSDR AN GSSGPSRGR EG GGADIELASPVNPHPAKKRRWAVSVPLP EGEDGDSGEEEFDGGGVS
Sbjct: 1361 AKRTLLSKVALKHLMEKVVPILTALKHVLERAHSPLLREIMSYFGELFRSHKEEVKAVLASEPGLVDEIDFDLRRFEKEEYERRQKVXXXXXXXXXXXXXXXXXXXMGPPRTPSNRRRSSMGGGGASGRRGSFAGQSMRDACTPMAAVQKSARKTPFQNLGACSAVKLKASTPGASSMFSPVRPGGGGRGSRPKTPVQLRTPRQAVAAALGNSPMDTDTSPVPIRNMLSDRTANDGSSGPSRGRSEGVGGADIELASPVNPHPAKKRRWAVSVPLPTEGEDGDSGEEEFDGGGVS 1655          
BLAST of mRNA_E-siliculosus-1a_F_contig1454.2660.1 vs. uniprot
Match: A0A6H5JKF8_9PHAE (Cnd1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKF8_9PHAE)

HSP 1 Score: 451 bits (1161), Expect = 1.220e-149
Identity = 267/287 (93.03%), Postives = 270/287 (94.08%), Query Frame = 0
Query:    9 VALKHLMEKVVPILTALKHVLERAHSPLLREIMFYFGELFRSHKEEVKAVLASEPGLVDEIDFDLRRFEKEEYERRQKAKEXXXXXXXXXXXXXXXXXXGPPRTPSNRXXXXXXXXXASGRRGSFAGPSLRDACTPMAAVQKSARKTPFQNLGACSAVKLKASTPGTSSVFSPARPGGGGRGSRPKTPVQLRTPRQAVAAALGNSPMDTDTSPVPIRNMLSDRKANGGSSGPSRGRGEGAGGADIELASPVNPHPAKKRRWAVSVPLPAEGEDGDSGEEEFDGGGVS 295
            VALKHLMEKVVPILTALKHVLER+HSPLLREIMFYFGELFRSHKEEVKAVLASEPGLVDEIDFDLRRFEKEEYERRQ    XXXXXXXXXXXXXXXXX GPPRTPSNR   XXXXXXASGRR SFAG SLRDACTPMAAVQKSARKTPFQNLGACSAVKLKASTPG SS+ SPARPGGGGRGSRPKTP QLRTPRQAVAAALGNSPMDTDTSPVPIRNMLSDR  NG SSGPS+GRGEGAG ADIELASPVNPHPAKKRRWAVSVPLPAEGEDGDSGEEEFDGGGVS
Sbjct:  515 VALKHLMEKVVPILTALKHVLERSHSPLLREIMFYFGELFRSHKEEVKAVLASEPGLVDEIDFDLRRFEKEEYERRQXXXXXXXXXXXXXXXXXXXXXMGPPRTPSNRRRSXXXXXXASGRRASFAGQSLRDACTPMAAVQKSARKTPFQNLGACSAVKLKASTPGASSIISPARPGGGGRGSRPKTPAQLRTPRQAVAAALGNSPMDTDTSPVPIRNMLSDRTPNGKSSGPSKGRGEGAGVADIELASPVNPHPAKKRRWAVSVPLPAEGEDGDSGEEEFDGGGVS 801          
BLAST of mRNA_E-siliculosus-1a_F_contig1454.2660.1 vs. uniprot
Match: W7TNH2_9STRA (Condensin-2 complex subunit d3 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TNH2_9STRA)

HSP 1 Score: 89.4 bits (220), Expect = 3.820e-16
Identity = 49/79 (62.03%), Postives = 59/79 (74.68%), Query Frame = 0
Query:    1 AKRTLLSKVALKHLMEKVVPILTALKHVLERAHSPLLREIMFYFGELFRSHKEEVKAVLASEPGLVDEIDFDLRRFEKE 79
            AK  LLSKV+ KHL+E VVP L +LK  LERAHSPL+R +M YF EL R  KEEVK  L++ P L  EI+FDL++FEKE
Sbjct: 1042 AKSRLLSKVSRKHLLEHVVPELVSLKACLERAHSPLIRNVMEYFLELMRHSKEEVKDALSTNPTLFHEIEFDLQQFEKE 1120          
BLAST of mRNA_E-siliculosus-1a_F_contig1454.2660.1 vs. uniprot
Match: A0A4D9D835_9STRA (Cnd1 domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D835_9STRA)

HSP 1 Score: 87.4 bits (215), Expect = 1.560e-15
Identity = 105/274 (38.32%), Postives = 131/274 (47.81%), Query Frame = 0
Query:    1 AKRTLLSKVALKHLMEKVVPILTALKHVLERAHSPLLREIMFYFGELFRSHKEEVKAVLASEPGLVDEIDFDLRRFEKEEYERRQKAKEXXXXXXXXXXXXXXXXXXGPPRTPSNRXXXXXXXXXASGRRGSFAGPSLRDACTPMAAVQKSARKTPFQNLGACSAVKLKASTPGTSSVFSPARPGGGGRGSRPKTPVQLRTPRQAVAAALGNSPMDTDTSPVPIRNMLSDRKANGGSSGPSRGRGEGAGGADIELASPVNPH-PAKKRRWAVSV 273
            AK  LLSKV+ KHL+E VVP L +LK  LERAHSPL+R +M YF EL R  KEEVK  L++   L  EI+FDL++FEKE    + +A+ XXXXXXXXXXXXXXXXX G   T SN               GS  G +   A T       S  +     L  CSA  L+ S+ G +                       RTP +A+ AAL         S  P+      R+  G  SG       G  G ++E    VN   P   + W V+V
Sbjct:  629 AKSRLLSKVSRKHLLEHVVPELVSLKACLERAHSPLIRNVMEYFLELMRHSKEEVKDALSTNITLFHEIEFDLQQFEKE---LKAQAEXXXXXXXXXXXXXXXXXXMGRQSTGSNLSRNLGDSQCRQSSLGSVMGRTPLQARTSNEFSSGSNSERAGSRLSGCSAPPLRRSSVGMN---------------------MSRTPSEAIKAALQPGSGTASQSLTPVLASAGKRRGVGSDSG-------GRAGEEMEEGMHVNVQLPTAIKEWNVTV 871          
BLAST of mRNA_E-siliculosus-1a_F_contig1454.2660.1 vs. uniprot
Match: A0A8B8D1C8_CRAVI (condensin-2 complex subunit D3-like n=1 Tax=Crassostrea virginica TaxID=6565 RepID=A0A8B8D1C8_CRAVI)

HSP 1 Score: 85.5 bits (210), Expect = 7.900e-15
Identity = 40/85 (47.06%), Postives = 67/85 (78.82%), Query Frame = 0
Query:    1 AKRTLLSKVALKHLMEKVVPILTALKHVLERAHSPLLREIMFYFGELFRSHKEEVKAVLASEPGLVDEIDFDLRRFEKEEYERRQ 85
            AK+TL+S+V  K+++E ++PI+ +LKH+LE+  SP+LR++M+Y  EL + +K EVK +L+++  L  EI+FDLR+FE+E+ E R+
Sbjct: 1249 AKKTLISQVVKKNVIENIIPIVVSLKHMLEKHRSPVLRDLMYYLRELMQDYKSEVKDILSADRQLAKEIEFDLRKFEEEQEEMRR 1333          
BLAST of mRNA_E-siliculosus-1a_F_contig1454.2660.1 vs. uniprot
Match: A0A7S0C9B1_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0C9B1_9STRA)

HSP 1 Score: 82.0 bits (201), Expect = 3.030e-14
Identity = 42/81 (51.85%), Postives = 61/81 (75.31%), Query Frame = 0
Query:    2 KRTLLSKVALKHLMEKVVPILTALKHVLERAHSPLLREIMFYFGELFRSHKEEVKAVLASEPGLVDEIDFDLRRFEKEEYE 82
            K  LLSK++ KHL+E +VPIL  LK VLE   S LL+++M Y  E+FR +K EVK +LA++P L+ E++FD+R+FEK++ E
Sbjct:  230 KGRLLSKISRKHLIETIVPILCNLKTVLESNRSALLKDLMIYLVEIFRRYKGEVKELLATDPSLLSELEFDMRQFEKKQKE 310          
BLAST of mRNA_E-siliculosus-1a_F_contig1454.2660.1 vs. uniprot
Match: A0A8B7ZLI1_ACAPL (condensin-2 complex subunit D3-like n=1 Tax=Acanthaster planci TaxID=133434 RepID=A0A8B7ZLI1_ACAPL)

HSP 1 Score: 81.6 bits (200), Expect = 1.560e-13
Identity = 39/86 (45.35%), Postives = 63/86 (73.26%), Query Frame = 0
Query:    1 AKRTLLSKVALKHLMEKVVPILTALKHVLERAHSPLLREIMFYFGELFRSHKEEVKAVLASEPGLVDEIDFDLRRFEKEEYERRQK 86
            AK  ++++V  ++++E +VP++ ALKH LE+AHSP LR +M Y  +L + ++ EVK +LA++  L  EI+FDLRRFE+E+ E  +K
Sbjct: 1256 AKTKIITQVVKRNVIENIVPVVIALKHTLEKAHSPTLRHLMLYLKQLMKDYRNEVKDILAADRQLATEIEFDLRRFEEEQAEAAKK 1341          
BLAST of mRNA_E-siliculosus-1a_F_contig1454.2660.1 vs. uniprot
Match: UPI000BA7FD6A (condensin-2 complex subunit D3-like n=1 Tax=Limulus polyphemus TaxID=6850 RepID=UPI000BA7FD6A)

HSP 1 Score: 80.9 bits (198), Expect = 1.990e-13
Identity = 38/88 (43.18%), Postives = 67/88 (76.14%), Query Frame = 0
Query:    1 AKRTLLSKVALKHLMEKVVPILTALKHVLERAHSPLLREIMFYFGELFRSHKEEVKAVLASEPGLVDEIDFDLRRFEKEEYERRQKAK 88
            AK+T++S+V  ++++E VVPI+ +LKH LE   SPLL+++M +  EL + +K EVK +++++  L +EI+FDLRRFE+++ E +Q+ +
Sbjct:  222 AKKTIISQVVKRNVIENVVPIVISLKHRLEENKSPLLKDLMLFLRELMKDYKSEVKEIMSADKQLANEIEFDLRRFEQQQEEEKQEKR 309          
BLAST of mRNA_E-siliculosus-1a_F_contig1454.2660.1 vs. uniprot
Match: A0A1S3I599_LINUN (condensin-2 complex subunit D3 n=1 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3I599_LINUN)

HSP 1 Score: 81.3 bits (199), Expect = 2.080e-13
Identity = 37/82 (45.12%), Postives = 65/82 (79.27%), Query Frame = 0
Query:    1 AKRTLLSKVALKHLMEKVVPILTALKHVLERAHSPLLREIMFYFGELFRSHKEEVKAVLASEPGLVDEIDFDLRRFEKEEYE 82
            AK+TL+S+V  K+++E +VPI+ +LKH+LE+  SP+L+++M Y  EL + +K EVK +++++  L +EI+FDLR+FE+++ E
Sbjct: 1203 AKKTLISQVVKKNVIENIVPIVISLKHMLEKHRSPVLKDLMMYLRELMKDYKTEVKEIMSADRQLANEIEFDLRKFEEQQEE 1284          
BLAST of mRNA_E-siliculosus-1a_F_contig1454.2660.1 vs. uniprot
Match: UPI001E1E1024 (condensin-2 complex subunit D3-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1E1024)

HSP 1 Score: 80.9 bits (198), Expect = 2.830e-13
Identity = 36/82 (43.90%), Postives = 64/82 (78.05%), Query Frame = 0
Query:    1 AKRTLLSKVALKHLMEKVVPILTALKHVLERAHSPLLREIMFYFGELFRSHKEEVKAVLASEPGLVDEIDFDLRRFEKEEYE 82
            AK+T++++V  K+++E +VPI+ +LKH++E+  SPLL+E++ Y  EL + +K EVK +L+++  L  EI+FDLR+FE+++ E
Sbjct: 1260 AKKTIITQVLKKNVIENIVPIVVSLKHMMEKERSPLLKELLMYLRELMKDYKSEVKEILSADRQLATEIEFDLRKFEEQQQE 1341          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1454.2660.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FP86_ECTSI5.070e-15091.86Cnd1 domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5JKF8_9PHAE1.220e-14993.03Cnd1 domain-containing protein n=1 Tax=Ectocarpus ... [more]
W7TNH2_9STRA3.820e-1662.03Condensin-2 complex subunit d3 n=1 Tax=Nannochloro... [more]
A0A4D9D835_9STRA1.560e-1538.32Cnd1 domain-containing protein n=1 Tax=Nannochloro... [more]
A0A8B8D1C8_CRAVI7.900e-1547.06condensin-2 complex subunit D3-like n=1 Tax=Crasso... [more]
A0A7S0C9B1_9STRA3.030e-1451.85Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
A0A8B7ZLI1_ACAPL1.560e-1345.35condensin-2 complex subunit D3-like n=1 Tax=Acanth... [more]
UPI000BA7FD6A1.990e-1343.18condensin-2 complex subunit D3-like n=1 Tax=Limulu... [more]
A0A1S3I599_LINUN2.080e-1345.12condensin-2 complex subunit D3 n=1 Tax=Lingula ung... [more]
UPI001E1E10242.830e-1343.90condensin-2 complex subunit D3-like n=1 Tax=Mercen... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR14222:SF1CONDENSIN-2 COMPLEX SUBUNIT D3coord: 1..174
IPR026971Condensin subunit 1/Condensin-2 complex subunit D3PANTHERPTHR14222CONDENSINcoord: 1..174

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1454contigE-siliculosus-1a_F_contig1454:21406..27384 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1454.2660.1mRNA_E-siliculosus-1a_F_contig1454.2660.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1454 21404..27384 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1454.2660.1 ID=prot_E-siliculosus-1a_F_contig1454.2660.1|Name=mRNA_E-siliculosus-1a_F_contig1454.2660.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=295bp
AKRTLLSKVALKHLMEKVVPILTALKHVLERAHSPLLREIMFYFGELFRS
HKEEVKAVLASEPGLVDEIDFDLRRFEKEEYERRQKAKEAAAIAAATVAA
SGAGSGMGPPRTPSNRRRSSMGGGGASGRRGSFAGPSLRDACTPMAAVQK
SARKTPFQNLGACSAVKLKASTPGTSSVFSPARPGGGGRGSRPKTPVQLR
TPRQAVAAALGNSPMDTDTSPVPIRNMLSDRKANGGSSGPSRGRGEGAGG
ADIELASPVNPHPAKKRRWAVSVPLPAEGEDGDSGEEEFDGGGVS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR026971CND1/NCAPD3