prot_E-siliculosus-1a_F_contig14445.2599.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig14445.2599.1
Unique Nameprot_E-siliculosus-1a_F_contig14445.2599.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length69
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig14445.2599.1 vs. uniprot
Match: D8LMD5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMD5_ECTSI)

HSP 1 Score: 142 bits (358), Expect = 1.870e-39
Identity = 68/68 (100.00%), Postives = 68/68 (100.00%), Query Frame = 0
Query:    1 LDRLSESAPKHLKCPICSKIMSDAVILPCCAKSTCDSCVRRALNASASMSCPLCQTRGVGPDSLLPNE 68
            LDRLSESAPKHLKCPICSKIMSDAVILPCCAKSTCDSCVRRALNASASMSCPLCQTRGVGPDSLLPNE
Sbjct:  139 LDRLSESAPKHLKCPICSKIMSDAVILPCCAKSTCDSCVRRALNASASMSCPLCQTRGVGPDSLLPNE 206          
BLAST of mRNA_E-siliculosus-1a_F_contig14445.2599.1 vs. uniprot
Match: A0A6H5L225_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L225_9PHAE)

HSP 1 Score: 140 bits (354), Expect = 1.010e-38
Identity = 67/68 (98.53%), Postives = 68/68 (100.00%), Query Frame = 0
Query:    1 LDRLSESAPKHLKCPICSKIMSDAVILPCCAKSTCDSCVRRALNASASMSCPLCQTRGVGPDSLLPNE 68
            LDRLSESAPKHLKCPICSKIMSDAVILPCCAKSTCDSCVRRALNASASMSCPLCQ+RGVGPDSLLPNE
Sbjct:  149 LDRLSESAPKHLKCPICSKIMSDAVILPCCAKSTCDSCVRRALNASASMSCPLCQSRGVGPDSLLPNE 216          
BLAST of mRNA_E-siliculosus-1a_F_contig14445.2599.1 vs. uniprot
Match: A0A836CNQ4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNQ4_9STRA)

HSP 1 Score: 90.9 bits (224), Expect = 9.820e-20
Identity = 42/68 (61.76%), Postives = 51/68 (75.00%), Query Frame = 0
Query:    1 LDRLSESAPKHLKCPICSKIMSDAVILPCCAKSTCDSCVRRALNASASMSCPLCQTRGVGPDSLLPNE 68
            LD+LS +AP+HLKCP+C  I+ DAV++PCC  S CDSCVR AL A+ SM CPLC   GV PD L+PN 
Sbjct:  331 LDQLSAAAPEHLKCPLCRNIVQDAVLVPCCQGSACDSCVRDALAAN-SMQCPLCSRPGVTPDQLIPNR 397          
BLAST of mRNA_E-siliculosus-1a_F_contig14445.2599.1 vs. uniprot
Match: A0A8K1C5H0_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C5H0_PYTOL)

HSP 1 Score: 80.5 bits (197), Expect = 4.450e-16
Identity = 33/68 (48.53%), Postives = 49/68 (72.06%), Query Frame = 0
Query:    1 LDRLSESAPKHLKCPICSKIMSDAVILPCCAKSTCDSCVRRALNASASMSCPLCQTRGVGPDSLLPNE 68
            LD+L  + P HL CP+C ++M+DAV++PCC +S CD C+R AL    +++CPLC T  + P+ LLPN+
Sbjct:  334 LDQLISNPPDHLACPLCKRLMNDAVLIPCCQESACDECLRSAL-IDHNLTCPLCNTPNMSPEKLLPNK 400          
BLAST of mRNA_E-siliculosus-1a_F_contig14445.2599.1 vs. uniprot
Match: A0A484DZX4_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DZX4_BRELC)

HSP 1 Score: 79.3 bits (194), Expect = 1.130e-15
Identity = 32/68 (47.06%), Postives = 47/68 (69.12%), Query Frame = 0
Query:    1 LDRLSESAPKHLKCPICSKIMSDAVILPCCAKSTCDSCVRRALNASASMSCPLCQTRGVGPDSLLPNE 68
            LD+   + P+HL CP+C ++MSDAV++PCC +S CD C+R AL     ++CPLC    + P+ LLPN+
Sbjct:  340 LDQFISNPPEHLACPLCRRLMSDAVLIPCCQESACDECLRSAL-IDRKLTCPLCSVNNMSPEKLLPNK 406          
BLAST of mRNA_E-siliculosus-1a_F_contig14445.2599.1 vs. uniprot
Match: A0A2D4BX16_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BX16_PYTIN)

HSP 1 Score: 78.6 bits (192), Expect = 1.470e-15
Identity = 32/68 (47.06%), Postives = 47/68 (69.12%), Query Frame = 0
Query:    1 LDRLSESAPKHLKCPICSKIMSDAVILPCCAKSTCDSCVRRALNASASMSCPLCQTRGVGPDSLLPNE 68
            LDRL  + P HL CP+C ++M+DAV++PCC +S C+ C+R AL     ++CPLC    + P+ LLPN+
Sbjct:  198 LDRLISNPPDHLACPLCKRLMNDAVLIPCCQESACEECLRSAL-IDRKLTCPLCSAPNMSPEKLLPNK 264          
BLAST of mRNA_E-siliculosus-1a_F_contig14445.2599.1 vs. uniprot
Match: A0A2P4Y5F3_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A2P4Y5F3_9STRA)

HSP 1 Score: 79.0 bits (193), Expect = 1.500e-15
Identity = 32/68 (47.06%), Postives = 47/68 (69.12%), Query Frame = 0
Query:    1 LDRLSESAPKHLKCPICSKIMSDAVILPCCAKSTCDSCVRRALNASASMSCPLCQTRGVGPDSLLPNE 68
            LD+   + P+HL CP+C ++MSDAV++PCC +S CD C+R AL     ++CPLC    + P+ LLPN+
Sbjct:  339 LDQFISNPPEHLACPLCRRLMSDAVLIPCCQESACDECLRSAL-IERKLTCPLCNVSNMSPEKLLPNK 405          
BLAST of mRNA_E-siliculosus-1a_F_contig14445.2599.1 vs. uniprot
Match: K3X144_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X144_GLOUD)

HSP 1 Score: 79.0 bits (193), Expect = 1.520e-15
Identity = 32/68 (47.06%), Postives = 47/68 (69.12%), Query Frame = 0
Query:    1 LDRLSESAPKHLKCPICSKIMSDAVILPCCAKSTCDSCVRRALNASASMSCPLCQTRGVGPDSLLPNE 68
            LD+   + P HL CP+C ++M+DAV++PCC +S CD C+R AL     ++CPLC T  + P+ LLPN+
Sbjct:  336 LDQFIANPPDHLACPLCKRLMNDAVLIPCCQESACDECLRSAL-IEKKLTCPLCNTTNMSPEKLLPNK 402          
BLAST of mRNA_E-siliculosus-1a_F_contig14445.2599.1 vs. uniprot
Match: D0NE99_PHYIT (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=D0NE99_PHYIT)

HSP 1 Score: 79.0 bits (193), Expect = 1.530e-15
Identity = 32/68 (47.06%), Postives = 47/68 (69.12%), Query Frame = 0
Query:    1 LDRLSESAPKHLKCPICSKIMSDAVILPCCAKSTCDSCVRRALNASASMSCPLCQTRGVGPDSLLPNE 68
            LD+   + P+HL CP+C ++MSDAV++PCC +S CD C+R AL     ++CPLC    + P+ LLPN+
Sbjct:  332 LDQFISNPPEHLACPLCRRLMSDAVLIPCCQESACDECLRSAL-IERKLTCPLCNVSNMSPEKLLPNK 398          
BLAST of mRNA_E-siliculosus-1a_F_contig14445.2599.1 vs. uniprot
Match: A0A3R7NI29_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7NI29_9STRA)

HSP 1 Score: 79.0 bits (193), Expect = 1.530e-15
Identity = 32/68 (47.06%), Postives = 47/68 (69.12%), Query Frame = 0
Query:    1 LDRLSESAPKHLKCPICSKIMSDAVILPCCAKSTCDSCVRRALNASASMSCPLCQTRGVGPDSLLPNE 68
            LD+   + P+HL CP+C ++MSDAV++PCC +S CD C+R AL     ++CPLC    + P+ LLPN+
Sbjct:  342 LDQFISNPPEHLACPLCRRLMSDAVLIPCCQESACDECLRSAL-IERKLTCPLCNVTNMSPEKLLPNK 408          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig14445.2599.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LMD5_ECTSI1.870e-39100.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L225_9PHAE1.010e-3898.53Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836CNQ4_9STRA9.820e-2061.76Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A8K1C5H0_PYTOL4.450e-1648.53Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A484DZX4_BRELC1.130e-1547.06Uncharacterized protein n=1 Tax=Bremia lactucae Ta... [more]
A0A2D4BX16_PYTIN1.470e-1547.06Uncharacterized protein n=1 Tax=Pythium insidiosum... [more]
A0A2P4Y5F3_9STRA1.500e-1547.06Uncharacterized protein n=2 Tax=Phytophthora TaxID... [more]
K3X144_GLOUD1.520e-1547.06Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
D0NE99_PHYIT1.530e-1547.06Uncharacterized protein n=2 Tax=Phytophthora TaxID... [more]
A0A3R7NI29_9STRA1.530e-1547.06Uncharacterized protein n=3 Tax=Phytophthora kerno... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 2..68
e-value: 1.5E-16
score: 61.8
NoneNo IPR availablePFAMPF13920zf-C3HC4_3coord: 12..56
e-value: 1.0E-6
score: 28.5
NoneNo IPR availablePANTHERPTHR15439:SF0E3 UBIQUITIN-PROTEIN LIGASE RBBP6coord: 7..68
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 3..67
IPR033489E3 ubiquitin-protein ligase RBBP6 familyPANTHERPTHR15439RETINOBLASTOMA-BINDING PROTEIN 6coord: 7..68
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 14..55
score: 10.262

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig14445contigE-siliculosus-1a_F_contig14445:767..973 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig14445.2599.1mRNA_E-siliculosus-1a_F_contig14445.2599.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig14445 767..973 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig14445.2599.1 ID=prot_E-siliculosus-1a_F_contig14445.2599.1|Name=mRNA_E-siliculosus-1a_F_contig14445.2599.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=69bp
LDRLSESAPKHLKCPICSKIMSDAVILPCCAKSTCDSCVRRALNASASMS
CPLCQTRGVGPDSLLPNE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR033489RBBP6
IPR013083Znf_RING/FYVE/PHD