prot_E-siliculosus-1a_F_contig1430.2534.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1430.2534.1
Unique Nameprot_E-siliculosus-1a_F_contig1430.2534.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length585
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1430.2534.1 vs. uniprot
Match: A0A6H5JA29_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JA29_9PHAE)

HSP 1 Score: 473 bits (1216), Expect = 1.360e-158
Identity = 333/638 (52.19%), Postives = 343/638 (53.76%), Query Frame = 0
Query:   25 MTSGVKRATRNSGIAVDVNLWDLRDLPKTSTVKRA-------------------PKLKLKDYTVRLPRASRDQDMKLLRRAARDNEGVGESDPVYPLTGPACITRKEAAAALLALGEERDDAMVAAAKAAVSESGDCGAGSRSTIAGG--SMPLAMDINQPLLAEAEADDHMVSRGTSGNLTTEDQRSSLPHPPQLYDAQGKSDSSDDTTGAMSAAAKIAPARAGDXXXXXXXXXXXXXXXXXXXXXXXXXX-----------------------------------------------------QGPRFEPEHGVGGSTSSNKYKHVIGDGDVGGDSSMVDRLGKIACVWGSSTGHHGQRGDGGGKAGAGCYGNXXXXXGDHDESDGAHTSGSRGYSGXXXXXXXGVTTSDXXXXXXXXXXXXXXXXXXXXXXXXXSRGGHVGYSGALHHKKSGPDEGKGCDGSSSVSSPSSPSRDSCLGKQKREDSXXXXXXXXDVISKRAKTGGRYCSYSGGXXXXXXXXXXXXXXXXXXXXXXSTGGGIAWDNA----GGCDVSSSELSPPSPSRDSSSFGKRKXXXXXXXXXXXXTVDGSGCVDVNKASGDDGASERCAKRARQAAGGGQPRQLRGSRDRSGK 584
            M SGVKRATRNSGIAVDVNLWDLRDLPKTSTVK A                   PKLKLKDYTVRLPRASRDQDMKLLRRAARDNEGVG SDPVYPLTGPACITRKEAAAALLALGEERDD MVA  +AA SESGDCGAG+ STIA G  S+PLAM I+QPLLAEAEAD  + S G S NLTTEDQRSSLPHP QL  AQGK DSSDDTTGAMSAAAKIAPARAGD                                                                               QG RF+PEHGVGGSTSSNKYKHVIGDGDVGGDSSMVDRLGKIACVWGSSTGHHGQ GDGGGKAG GCY  XXXXX              RGYSG       GVTTSD                                      +  S   +G G                                                                             TGGGIAWDNA    G C+VS SELSP SP  DSSSFGKR              VDGSGCVDVN ASGDDG SERCAKRARQAAGGG+  QLRG RDRSGK
Sbjct:    1 MASGVKRATRNSGIAVDVNLWDLRDLPKTSTVKSAATMNNSPDPPSPRSTTHAAPKLKLKDYTVRLPRASRDQDMKLLRRAARDNEGVGGSDPVYPLTGPACITRKEAAAALLALGEERDDEMVAXXRAAASESGDCGAGAGSTIADGESSIPLAMGISQPLLAEAEADARLASPGVSRNLTTEDQRSSLPHPAQLDLAQGKPDSSDDTTGAMSAAAKIAPARAGDVAGLAAAAVAKVLSRGAAEGKPVLKRIFATVVAYDIGNSMEVAGGGGKGCGXXXXXXXXXXXXXXXAFDGVAGGGIGGGQGRRFQPEHGVGGSTSSNKYKHVIGDGDVGGDSSMVDRLGKIACVWGSSTGHHGQGGDGGGKAGPGCYXXXXXXXXXXXXXXXXXXXXXRGYSGGYS----GVTTSDD-------------------------------------NDSSXXXDGNG-----------------------------------------------------------------------------TGGGIAWDNATDNTGECNVSPSELSPLSPFHDSSSFGKRNRGHDDDDNDDM--VDGSGCVDVNTASGDDGVSERCAKRARQAAGGGKSLQLRGLRDRSGK 518          
BLAST of mRNA_E-siliculosus-1a_F_contig1430.2534.1 vs. uniprot
Match: D7G074_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G074_ECTSI)

HSP 1 Score: 387 bits (995), Expect = 3.860e-127
Identity = 226/326 (69.33%), Postives = 232/326 (71.17%), Query Frame = 0
Query:    1 MPGGTRSSSRRKGGESDQRTGGAAMTSGVKRATRNSGIAVDVNLWDLRDLPKTSTVKRAPKLKLKDYTVRLPRASRDQDMKLLRRAARDNEGVGESDPVYPLTGPACITRKEAAAALLALGEERDDAMVAAAKAAVSESGDCGAGSRSTIAGGSMPLAMDINQPLLAEAEADDHMVSRGTSGNLTTEDQRSSLPHPPQLYDAQGKSDSSDDTTGAMSAAAKIAPARAGDXXXXXXXXXXXXXXXXXXXXXXXXXX---------------------------------------------------QGPRFEPEHGVGGSTSSNKY 275
            MPGGTRSSSRRKGGESDQRTGG AMTSGVKRATRNSGI +DVNLWDLRDLPKTSTVKRAPKL LKDYTVRLPRASRDQDMKLLRR ARD EGVGESDPVYPLTGPACITRKEAAAALLALGEERDDAMVAAAKAAVSESGDCGAG+RSTIA GS+PLAM INQPLLAEAEAD  + S G S +LTTEDQRSSLPHP QLY AQGK DSSDD TGAMSAAAKIAPARAGD                                                                             QGPRFEPEHGVGGSTSSN+Y
Sbjct:    1 MPGGTRSSSRRKGGESDQRTGGEAMTSGVKRATRNSGIGIDVNLWDLRDLPKTSTVKRAPKLNLKDYTVRLPRASRDQDMKLLRRTARDIEGVGESDPVYPLTGPACITRKEAAAALLALGEERDDAMVAAAKAAVSESGDCGAGARSTIADGSIPLAMGINQPLLAEAEADARLASPGVSRSLTTEDQRSSLPHPAQLYHAQGKPDSSDDATGAMSAAAKIAPARAGDVAELAAAAAAKVFSRGAAEGEPVLKRSLATAVANDIANSMEVAGGGGKRCDGGSSSXXXXXXXXXXXXXXXXXXXXXQGPRFEPEHGVGGSTSSNRY 326          
BLAST of mRNA_E-siliculosus-1a_F_contig1430.2534.1 vs. uniprot
Match: D8LE40_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE40_ECTSI)

HSP 1 Score: 279 bits (714), Expect = 3.950e-86
Identity = 153/173 (88.44%), Postives = 158/173 (91.33%), Query Frame = 0
Query:   57 KRAPKLKLKDYTVRLPRASRDQDMKLLRRAARDNEGVGESDPVYPLTGPACITRKEAAAALLALGEERDDAMVAAAKAAVSESGDCGAGSRSTIAGGSMPLAMDINQPLLAEAEADDHMVSRGTSGNLTTEDQRSSLPHPPQLYDAQGKSDSSDDTTGAMSAAAKIAPARAGD 229
            ++ PKLKLKDYTVRLPRASRDQDMKLLRRAARD EGVGESDPVYPLTGPACITRKEAAAALLALGEERDDAMVAAAKAAVSESGDCG G+RSTIA GS+PLAM INQPLLAEAEAD  + S G S NLTTEDQRSSLPHP QLY AQGK DSSDD TGAMSAAAKIAPARAGD
Sbjct:   28 RQPPKLKLKDYTVRLPRASRDQDMKLLRRAARDIEGVGESDPVYPLTGPACITRKEAAAALLALGEERDDAMVAAAKAAVSESGDCGEGARSTIADGSIPLAMGINQPLLAEAEADARLASPGVSRNLTTEDQRSSLPHPAQLYHAQGKPDSSDDATGAMSAAAKIAPARAGD 200          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1430.2534.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JA29_9PHAE1.360e-15852.19Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G074_ECTSI3.860e-12769.33Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LE40_ECTSI3.950e-8688.44Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1430contigE-siliculosus-1a_F_contig1430:15275..19107 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1430.2534.1mRNA_E-siliculosus-1a_F_contig1430.2534.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1430 15275..19107 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1430.2534.1 ID=prot_E-siliculosus-1a_F_contig1430.2534.1|Name=mRNA_E-siliculosus-1a_F_contig1430.2534.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=585bp
MPGGTRSSSRRKGGESDQRTGGAAMTSGVKRATRNSGIAVDVNLWDLRDL
PKTSTVKRAPKLKLKDYTVRLPRASRDQDMKLLRRAARDNEGVGESDPVY
PLTGPACITRKEAAAALLALGEERDDAMVAAAKAAVSESGDCGAGSRSTI
AGGSMPLAMDINQPLLAEAEADDHMVSRGTSGNLTTEDQRSSLPHPPQLY
DAQGKSDSSDDTTGAMSAAAKIAPARAGDMAGSSGGSGGGGGAFDGVAGG
GVGGGQGPRFEPEHGVGGSTSSNKYKHVIGDGDVGGDSSMVDRLGKIACV
WGSSTGHHGQRGDGGGKAGAGCYGNGGGASGDHDESDGAHTSGSRGYSGG
YSGGYSGVTTSDDNDSSSGGDGNGFIMTSSSSSTSSSSRGGHVGYSGALH
HKKSGPDEGKGCDGSSSVSSPSSPSRDSCLGKQKREDSNDDGGGGGDVIS
KRAKTGGRYCSYSGGSGGSGGSGGGVFSASSNSSNSSSTGGGIAWDNAGG
CDVSSSELSPPSPSRDSSSFGKRKRGHDDDDDDDDDTVDGSGCVDVNKAS
GDDGASERCAKRARQAAGGGQPRQLRGSRDRSGK*
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