prot_E-siliculosus-1a_F_contig1421.2485.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1421.2485.1
Unique Nameprot_E-siliculosus-1a_F_contig1421.2485.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length274
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig1421.2485.1 vs. uniprot
Match: D8LIB4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIB4_ECTSI)

HSP 1 Score: 481 bits (1237), Expect = 1.770e-170
Identity = 260/271 (95.94%), Postives = 264/271 (97.42%), Query Frame = 0 
Query:    1 MASLNASRGAASASTVYDPYKIFLAAQRCMGDPSVVAKVLVELLGDYATPDVLMASAASVLEIYYGGGGLRKESMTDFGKFAGELADELGARNSSQASHEKMREAQSVYELFEEADTDNSGTISKQEFCVFGSNIDVSSDEEALXXXXXXXXXXXXXXXFLEWLQFCVPGPGRDPNSFNCAGQHGLQSCVAPADDTTCNWCGSKWPAGSRMFSCRECDCDACLECAILHLQSCDTRIFCERAVVDPSKTSARSCAVCDREGSPASDGEDEE 271
            MASLNA+RGAASASTVYDPYKIF AAQRCMGDPSVVAKVLVELLGD ATPDVLMASAASVLEIYYGGGGLRK SMTDFGKFAGELADELGARNS+QA  EKM+EAQSVYELFEEADTDNSGTISKQEFCVFGSNIDVSSDEEALXXXXXXXXXXXXXXXFLEWLQFCVPGPGRDPNSFNCAGQHGLQSC APADDTTCNWCGSKWPAGSRMFSCRECDCDACLECAILHLQSCDTRIFCERAVVDPSKTSARSCAVC+RE SPASDGEDEE
Sbjct:    1 MASLNANRGAASASTVYDPYKIFQAAQRCMGDPSVVAKVLVELLGDCATPDVLMASAASVLEIYYGGGGLRKTSMTDFGKFAGELADELGARNSTQAE-EKMKEAQSVYELFEEADTDNSGTISKQEFCVFGSNIDVSSDEEALXXXXXXXXXXXXXXXFLEWLQFCVPGPGRDPNSFNCAGQHGLQSCAAPADDTTCNWCGSKWPAGSRMFSCRECDCDACLECAILHLQSCDTRIFCERAVVDPSKTSARSCAVCEREASPASDGEDEE 270
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BLAST of mRNA_E-siliculosus-1a_F_contig1421.2485.1 vs. uniprot
Match: D7G0S5_ECTSI (Calcium dependent protein kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0S5_ECTSI)

HSP 1 Score: 104 bits (260), Expect = 1.170e-21
Identity = 83/219 (37.90%), Postives = 116/219 (52.97%), Query Frame = 0 
Query:   14 STVYDPYKIFLAAQRCMGDPSVVAKVLVELL------GDYATPDVLMASAASVLEIYYGGGGLRKESMTDFGKFAGELADELGARNSSQASHEKMREAQSVYELFEEADTDNSGTISKQEFCVFGSNIDVSSDEEALXXXXXXXXXXXXXXXFLEWLQFCVPGPGRDPNSFNCAGQHGLQSCVAPADDTTCNWCGSKWPAGSRMFSCRECDCDACLECA 226
            S  Y  YK F A + C GD + +A++  ELL      G  A P +++ +  +V+  Y G    RK ++ +F +F+  L+ +L     +Q +   M  A+ +Y +F E D+D SG IS +E+  F S   V     A   XXXXXXXXXXXXX   W    +   GRD +SFNC G HGL   VA  +   C++CG+   AG     CR CDCDAC  C+
Sbjct:   38 SAAYWGYKAFQALRLCSGDVTALAEIAAELLDQGLCAGLVANPGMILEAVEAVVSAYGGIQSFRK-NVKNFAQFSAALSKQLNGDGKTQTNGRTMDSAEHLYTMFTECDSDGSGGISIEEYVYFCSREGVPRSV-AETTXXXXXXXXXXXXXXXXWTAMMMGRVGRDKDSFNCGGNHGLVQYVAVYNGMACDFCGTPIQAGFFAKGCRRCDCDACATCS 254
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BLAST of mRNA_E-siliculosus-1a_F_contig1421.2485.1 vs. uniprot
Match: A0A6H5K5X6_9PHAE (EF-hand domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5X6_9PHAE)

HSP 1 Score: 102 bits (253), Expect = 9.810e-21
Identity = 70/221 (31.67%), Postives = 104/221 (47.06%), Query Frame = 0 
Query:   14 STVYDPYKIFLAAQRCMGDPSVVAKVLVELL------GDYATPDVLMASAASVLEIYYGGGGLRKESMTDFGKFAGELADELGARNSSQASHEKMREAQSVYELFEEA--DTDNSGTISKQEFCVFGSNIDVSSDEEALXXXXXXXXXXXXXXXFLEWLQFCVPGPGRDPNSFNCAGQHGLQSCVAPADDTTCNWCGSKWPAGSRMFSCRECDCDACLECA 226
            S  Y  YK F A + C GD + + ++  ELL      G  A P ++  +  +V+  Y G    RK ++ +F +F+  L+ +L A   +Q +   M  A+ +Y +F +A  D+D SG IS +E+  F     +     A                F EW    +   GRD +SFNC G HGL   VA  +   C++CG+   AG     CR CDCDAC  C+
Sbjct:   43 SAAYWGYKAFQALRLCSGDVTTLVEIAAELLDQGLCAGLVANPGMIFEAVQAVVSAYGGIQSFRK-NVKNFAQFSEALSKQLNADGKTQTNGRAMDSAEHLYTMFTQACCDSDGSGGISVEEYVYFCGREGIPRSV-AETTFFQADIDGNGQISFEEWTAMMIGRVGRDEDSFNCGGHHGLVQYVAVFNGMACDFCGAPIQAGFFAKGCRRCDCDACATCS 261
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1421.2485.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LIB4_ECTSI1.770e-17095.94Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G0S5_ECTSI1.170e-2137.90Calcium dependent protein kinase n=1 Tax=Ectocarpu... [more]
A0A6H5K5X6_9PHAE9.810e-2131.67EF-hand domain-containing protein n=1 Tax=Ectocarp... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002048EF-hand domainSMARTSM00054efh_1coord: 107..135
e-value: 2.7E-4
score: 30.2
coord: 142..170
e-value: 0.66
score: 19.0
IPR002048EF-hand domainPFAMPF13499EF-hand_7coord: 108..167
e-value: 5.2E-11
score: 42.8
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 138..173
score: 12.393
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 103..137
score: 8.432
NoneNo IPR availableGENE3D1.10.238.10coord: 66..173
e-value: 7.6E-17
score: 63.5
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 151..163
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 103..170

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1421contigE-siliculosus-1a_F_contig1421:20142..23780 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1421.2485.1mRNA_E-siliculosus-1a_F_contig1421.2485.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1421 18354..25064 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1421.2485.1 ID=prot_E-siliculosus-1a_F_contig1421.2485.1|Name=mRNA_E-siliculosus-1a_F_contig1421.2485.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=274bp
MASLNASRGAASASTVYDPYKIFLAAQRCMGDPSVVAKVLVELLGDYATP
DVLMASAASVLEIYYGGGGLRKESMTDFGKFAGELADELGARNSSQASHE
KMREAQSVYELFEEADTDNSGTISKQEFCVFGSNIDVSSDEEALELFARV
DTDKNGVISFLEWLQFCVPGPGRDPNSFNCAGQHGLQSCVAPADDTTCNW
CGSKWPAGSRMFSCRECDCDACLECAILHLQSCDTRIFCERAVVDPSKTS
ARSCAVCDREGSPASDGEDEEAA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011992EF-hand-dom_pair
IPR018247EF_Hand_1_Ca_BS
IPR002048EF_hand_dom