prot_E-siliculosus-1a_F_contig1390.2312.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1390.2312.1
Unique Nameprot_E-siliculosus-1a_F_contig1390.2312.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length268
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig1390.2312.1 vs. uniprot
Match: A0A6H5KT50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT50_9PHAE)

HSP 1 Score: 127 bits (318), Expect = 3.040e-30
Identity = 94/264 (35.61%), Postives = 120/264 (45.45%), Query Frame = 0 
Query:   38 HNWLSQGPGLANRGKLV---------EAHQKSMEGSEPRV-------REGSAKGDTRELGPRTEMCGQGRQRWQGRYQPPGGGRXXXXXXXTRTHEPIWARAGAGAREGGRREVTHEADGLGKLGA------------------------------GATCSRHDVPAGMASGTQNADVVEQKFDAIEFPLYKETAPDSIKSVSSLEPSEFEEPFRRFLEQYYNLDGGSDRARRNRSKMLSEVHVQKEKAALYLCLMYHTSPDIQ 255
            +N   QGPG ANR +              ++    +  RV       R G  +G+ RE+G   +  GQG Q  Q   +P GG R       TR + P W  AG G REGG    T +A+GLGK G                               G TC  H VPAGMA+G +NAD       AIEFPLYK+ AP  +  +  L+    + P R FLEQYYN D   +      +K+LS  H+   KAAL+L LMYHT+  IQ
Sbjct:  102 NNEFPQGPGRANRPRWAGQGGCSSTRNRGERDWGNARRRVHQDPTGERRGPGEGEAREIGSWRDKRGQGCQWRQEGNEPSGGARGGGERAETRRYTPTWGTAGDGTREGGGGGATRKAEGLGKFGVRPVQDPRRIPLTHRGLRHPRSPPSTNLDKTGTTCHSHGVPAGMAAGARNAD-------AIEFPLYKDQAPQPVSRMPWLKQHMLDGPLRGFLEQYYNNDDDEEGHEWTGAKILSNRHLHSWKAALFLFLMYHTNEQIQ 358
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BLAST of mRNA_E-siliculosus-1a_F_contig1390.2312.1 vs. uniprot
Match: D7G951_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G951_ECTSI)

HSP 1 Score: 75.5 bits (184), Expect = 2.850e-12
Identity = 42/96 (43.75%), Postives = 57/96 (59.38%), Query Frame = 0 
Query:  160 MASGTQNADVVEQKFDAIEFPLYKETAPDSIKSVSSLEPSEFEEPFRRFLEQYYNLDGGSDRARRNRSKMLSEVHVQKEKAALYLCLMYHTSPDIQ 255
            MA+G +NAD        IEFPLYK+ AP  + S+  L+    + P R FLEQYYN D   +      +K+LS+ H+ + K AL+L LMYHT+  IQ
Sbjct:    1 MAAGARNAD-------PIEFPLYKDQAPQPVSSMPWLKQHMLDGPLRGFLEQYYNHDDEEEGREWTSAKILSDRHLHRGKTALFLFLMYHTNEQIQ 89
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1390.2312.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KT50_9PHAE3.040e-3035.61Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G951_ECTSI2.850e-1243.75Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1390contigE-siliculosus-1a_F_contig1390:5893..7295 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1390.2312.1mRNA_E-siliculosus-1a_F_contig1390.2312.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1390 5877..10526 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1390.2312.1 ID=prot_E-siliculosus-1a_F_contig1390.2312.1|Name=mRNA_E-siliculosus-1a_F_contig1390.2312.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=268bp
MDNAIKGIRAQGASEKVPGDEIITACQTRLEASSIRAHNWLSQGPGLANR
GKLVEAHQKSMEGSEPRVREGSAKGDTRELGPRTEMCGQGRQRWQGRYQP
PGGGRGRGGGAGTRTHEPIWARAGAGAREGGRREVTHEADGLGKLGAGAT
CSRHDVPAGMASGTQNADVVEQKFDAIEFPLYKETAPDSIKSVSSLEPSE
FEEPFRRFLEQYYNLDGGSDRARRNRSKMLSEVHVQKEKAALYLCLMYHT
SPDIQVGQLSSFKHRSV*
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