prot_E-siliculosus-1a_F_contig1385.2289.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1385.2289.1
Unique Nameprot_E-siliculosus-1a_F_contig1385.2289.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length502
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1385.2289.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 34..357
e-value: 2.3E-11
score: 44.7
IPR008615FNIPPFAMPF05725FNIPcoord: 402..443
e-value: 3.9E-7
score: 30.1
coord: 39..77
e-value: 3.1E-7
score: 30.4
coord: 270..310
e-value: 1.7E-6
score: 28.1
coord: 226..268
e-value: 2.4E-7
score: 30.8
coord: 94..137
e-value: 3.7E-6
score: 27.0
coord: 336..378
e-value: 9.3E-8
score: 32.1
NoneNo IPR availablePANTHERPTHR32134UNCHARACTERIZEDcoord: 192..405
NoneNo IPR availablePANTHERPTHR32134:SF91FNIP REPEAT-CONTAINING PROTEIN-RELATEDcoord: 388..493
coord: 26..251
coord: 192..405
NoneNo IPR availablePANTHERPTHR32134UNCHARACTERIZEDcoord: 388..493
coord: 26..251
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..19
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 20..501
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..19
score: 0.694
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 69..374
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 325..467

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1385contigE-siliculosus-1a_F_contig1385:13777..22189 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1385.2289.1mRNA_E-siliculosus-1a_F_contig1385.2289.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1385 13727..22594 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1385.2289.1 ID=prot_E-siliculosus-1a_F_contig1385.2289.1|Name=mRNA_E-siliculosus-1a_F_contig1385.2289.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=502bp
MILKVWLSPLFLLVQEGMGAEDPVREMTLGASYRSEIDQPLSGVKLPESL
QKLTFGKYFNQPLGGILWPDSLKEIRFDNVDLVHFISEGKDSGFNRPIAD
VTWPASLEILVFGHRFNKPVVDVTWPASLRQLSFGYSFNGRIDEVVWPVS
LQELSLGSSFTQPIAEVVWPAALQQLEFGQKFNLPVAGVVWPASLQQLSF
GHHFNQSMAEVVWPASLRNLSFKFDFNQPVAEVVWPESLQQLEFGQNFNQ
PIAGVVWPASLRQLSFGRDFNQSIAKVVWPASLQRLMLGTNFNQPIVEVA
WPASLKQLSFAIDFNQPIIGAEWPASLQQLSLGKRFNQPITGVNWPASLE
KLHIPQHFNQPIEEVVWPASLQELSFGSQFDQPIAGVMWPASLQQLSLGH
SFNQPIAGVAWPASLEKLVFSHRFNQPIADVVWPTSLQTLTFGFEFSQPI
SEVEWPASLQELHFGNYFDLPLGEVVWPDSLVSLTRGTHAQPIVRAGTSI
K*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008615FNIP
IPR032675LRR_dom_sf