prot_E-siliculosus-1a_F_contig1380.2265.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1380.2265.1
Unique Nameprot_E-siliculosus-1a_F_contig1380.2265.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length368
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig1380.2265.1 vs. uniprot
Match: D8LFA4_ECTSI (PX domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFA4_ECTSI)

HSP 1 Score: 561 bits (1445), Expect = 4.100e-199
Identity = 318/367 (86.65%), Postives = 324/367 (88.28%), Query Frame = 0 
Query:    1 MSSYGGEESLRSTRKGSGAKRGSEDEGLIGTASLEVLLCAAASTNNSRVAVNGGAGPTMYEVVYTRGGWIWRTSHRYSDWLSLKERLRADFGKRNLPDDELFPQKEDVGAIIVKVLSSCQGCREGGSRAVGHLEERRRGLQAYFSQVLDEQRELWDSSADIKAFFSPGPPTSYSAALSRRRSEQLKEEKLKAKEAXXXXXXXXXXXXXXXGSLFETSPATTPSXXXXXXXKPSFSTYPFSASSSARSTSASSSMFSPRRPEDQWSASXXXXXXXXXXXXXXXSSGSVINRLAAMKKQMPSLRDFLFDDAPPPPTAGSVNGSVNGSRASSRHNKIPSSTNKPPSESGVTDPDGGISEAGGSKHSIICE 367
            MSSYGGEESLRS RKGSGAKRGSEDEG+IGTASLEVL  A  +TN          GPTMY+V YTRGGWIWRTSHRYSDWLSLKERL+ADFGKRNLPDDELFPQKEDVGAIIVKVLSSCQGCREGG RAVGHLEERRRGLQAYFSQVLDEQRELWDSSADIKAFFSPGPPTSYSAALSRRRSEQLKEEKLKAKEA               GSLFETSPATTPS       KPSFSTYPFS SSSARSTS SSSMFSPRRPEDQWSASXXXXXXXXXXXXXXXSSGSVINRLAAMKKQMPSLRD LFDDAPPPPTAGSVNGSVNGSRASSRHNKIP+STNKPPSESGVTDPDGGISEAGGSKHSII +
Sbjct:    1 MSSYGGEESLRSPRKGSGAKRGSEDEGIIGTASLEVLCAAKPNTNT---------GPTMYDVAYTRGGWIWRTSHRYSDWLSLKERLQADFGKRNLPDDELFPQKEDVGAIIVKVLSSCQGCREGGGRAVGHLEERRRGLQAYFSQVLDEQRELWDSSADIKAFFSPGPPTSYSAALSRRRSEQLKEEKLKAKEASSAASMMACSLKSTLGSLFETSPATTPSAAAAAA-KPSFSTYPFSTSSSARSTSVSSSMFSPRRPEDQWSASXXXXXXXXXXXXXXXSSGSVINRLAAMKKQMPSLRDILFDDAPPPPTAGSVNGSVNGSRASSRHNKIPASTNKPPSESGVTDPDGGISEAGGSKHSIISD 357
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BLAST of mRNA_E-siliculosus-1a_F_contig1380.2265.1 vs. uniprot
Match: A0A6H5KH88_9PHAE (PX domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KH88_9PHAE)

HSP 1 Score: 555 bits (1429), Expect = 1.080e-196
Identity = 318/367 (86.65%), Postives = 326/367 (88.83%), Query Frame = 0 
Query:    1 MSSYGGEESLRSTRKGSGAKRGSEDEGLIGTASLEVLLCAAASTNNSRVAVNGGAGPTMYEVVYTRGGWIWRTSHRYSDWLSLKERLRADFGKRNLPDDELFPQKEDVGAIIVKVLSSCQGCREGGSRAVGHLEERRRGLQAYFSQVLDEQRELWDSSADIKAFFSPGPPTSYSAALSRRRSEQLKEEKLKAKEAXXXXXXXXXXXXXXXGSLFETSPATTPSXXXXXXXKPSFSTYPFSASSSARSTSASSSMFSPRRPEDQWSASXXXXXXXXXXXXXXXSSGSVINRLAAMKKQMPSLRDFLFDDAPPPPTAGSVNGSVNGSRASSRHNKIPSSTNKPPSESGVTDPDGGISEAGGSKHSIICE 367
            MSSYGGE  LRS RKGSGAKRGSEDEG I TASL+VL  AA     + +A +  AGPTMYE VYTRGGWIWRTSHRYSDWLSLKERLRADFGKRNLPDDELFPQKEDVGAII KVLSSCQGCREGGSRAVGH+EERRRGLQAYFSQVLDEQRELWDSSADI+AFFSPGPPTSYSAALSRRRSEQLKEEKLKAKEA  XXXXXXXXXXXXXGSLFETSPATTPS       KPSFSTYPFSASSSARSTSASSSMFSPR PEDQWSAS  XXXXX        SSGSVI+RLAAMKKQMPSLRD LFDDAPPPPT GSVNGS+NGSRASSRHNKIPSSTNKPPSESG TDPDGGISEAGGSKHSIICE
Sbjct:    1 MSSYGGENRLRSPRKGSGAKRGSEDEGAIATASLQVLCAAATEPRPNLLATS--AGPTMYEAVYTRGGWIWRTSHRYSDWLSLKERLRADFGKRNLPDDELFPQKEDVGAIIGKVLSSCQGCREGGSRAVGHIEERRRGLQAYFSQVLDEQRELWDSSADIEAFFSPGPPTSYSAALSRRRSEQLKEEKLKAKEASSXXXXXXXXXXXXXGSLFETSPATTPSAAAAGA-KPSFSTYPFSASSSARSTSASSSMFSPRLPEDQWSASASXXXXXPGVGAGGRSSGSVISRLAAMKKQMPSLRDLLFDDAPPPPTPGSVNGSINGSRASSRHNKIPSSTNKPPSESGATDPDGGISEAGGSKHSIICE 364
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1380.2265.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LFA4_ECTSI4.100e-19986.65PX domain-containing protein n=1 Tax=Ectocarpus si... [more]
A0A6H5KH88_9PHAE1.080e-19686.65PX domain-containing protein n=1 Tax=Ectocarpus sp... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001683Phox homologous domainPFAMPF00787PXcoord: 57..153
e-value: 3.6E-6
score: 27.0
IPR001683Phox homologous domainPROSITEPS50195PXcoord: 38..172
score: 9.13
IPR036871PX domain superfamilyGENE3D3.30.1520.10coord: 34..169
e-value: 7.8E-11
score: 43.6
IPR036871PX domain superfamilySUPERFAMILY64268PX domaincoord: 52..168

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1380contigE-siliculosus-1a_F_contig1380:14791..20448 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1380.2265.1mRNA_E-siliculosus-1a_F_contig1380.2265.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1380 14687..20771 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1380.2265.1 ID=prot_E-siliculosus-1a_F_contig1380.2265.1|Name=mRNA_E-siliculosus-1a_F_contig1380.2265.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=368bp
MSSYGGEESLRSTRKGSGAKRGSEDEGLIGTASLEVLLCAAASTNNSRVA
VNGGAGPTMYEVVYTRGGWIWRTSHRYSDWLSLKERLRADFGKRNLPDDE
LFPQKEDVGAIIVKVLSSCQGCREGGSRAVGHLEERRRGLQAYFSQVLDE
QRELWDSSADIKAFFSPGPPTSYSAALSRRRSEQLKEEKLKAKEASSAAS
MMASSLKSTLGSLFETSPATTPSAAAAAAAKPSFSTYPFSASSSARSTSA
SSSMFSPRRPEDQWSASASSAAAGPGVGAGGGSSGSVINRLAAMKKQMPS
LRDFLFDDAPPPPTAGSVNGSVNGSRASSRHNKIPSSTNKPPSESGVTDP
DGGISEAGGSKHSIICE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036871PX_dom_sf
IPR001683Phox