prot_E-siliculosus-1a_F_contig1376.2245.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1376.2245.1
Unique Nameprot_E-siliculosus-1a_F_contig1376.2245.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length747
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig1376.2245.1 vs. uniprot
Match: D8LN60_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN60_ECTSI)

HSP 1 Score: 828 bits (2138), Expect = 1.210e-286
Identity = 472/534 (88.39%), Postives = 485/534 (90.82%), Query Frame = 0 
Query:  116 MAAVCLQRHARGRPQRRVFRELVRPALHIYVARGSPQISPFGIGDRRAILLARFMAVLGAYNGLRDIVPTLSSLTCRSRKHRQRNRVAASAPLFGSDAARISTDGVVALSSSSHPAAKTEVVVQRAIASDDTERRDQGPDSREGEHGASAEAPNSGEGTPGRTAKGGTQDTRGNNNSSEAAQTAEREATIVLWALRDAAARVVQEEIRCFARRKRWLLLGTGQRQREPEEHGDEGRSKSTVGVESPTGTGVVYQPEVAGGLPWAIAAGVSPIAPSSASFSSSSAKATTERXTMAGTSSATGGSTGITMTTDTRRSPAT--MMWENKSRSAYDSWALSSPTPNRSTHTAGSTVSSARSSPATPRTTTAAGTPASGGYTGRTXXXXXXXXSSATRRTKDSSCGESQETSSFLVSPTTSRSPHTAGSAVSTPWSFQQSARTRTQGDSKGDPAPELAWTWGEEGAEGEPPDEKHTWTDARRTTSRAVRWPILPSEERKKRENEAHLRRNKSRLSVTLRGLANLECQGNFVLPEIIRMQ 647
            MAAVCLQRHARGRPQRRVFRELVRPALHIYVA+G PQISPFGIGDRRAILL+R MA+L AYNGLR +VPTLS+LTCRSRKHR+RNR AAS PLFGSDAA  STDGVVAL SSSHPAAKTEVVVQRAI SDDTER DQGPDSREGE  ASAEAPNSG+ TPGRT KGG QD R  NNSSEAAQ AEREATIVLWALRDAAARVVQEE+RCFARRKRWLL+GTGQRQREPEEHGDEGRSKSTVGVESPTGTGVVYQPEVAGGLPWAIAAGVSPIAP SASFSSSSA+ TT R TMAGT SATGGSTG TMT DTRRS  T   M ENKSRSA DSWA SSPTPNRS HTA STVSSARSSPATPRTTTAAGTPASGGYTGR XXXXXXXX SATRRTKDS+CGES ET S LVSPTTSRSPHTAGSAVSTPWSFQQSARTRTQGDS GDPAPELAWTW EE  EGEPPDEK+ WT+ARRTT RAVRWPILPSEERKKRENEAHLRRNKSRL VTLRGLANLECQGNFVLPEIIRMQ
Sbjct:    1 MAAVCLQRHARGRPQRRVFRELVRPALHIYVAQGPPQISPFGIGDRRAILLSRLMAILDAYNGLRGLVPTLSNLTCRSRKHRRRNRAAASPPLFGSDAAMTSTDGVVALPSSSHPAAKTEVVVQRAIVSDDTERPDQGPDSREGEDAASAEAPNSGKCTPGRTPKGGAQDARRGNNSSEAAQAAEREATIVLWALRDAAARVVQEEMRCFARRKRWLLVGTGQRQREPEEHGDEGRSKSTVGVESPTGTGVVYQPEVAGGLPWAIAAGVSPIAPPSASFSSSSARGTTGRTTMAGTPSATGGSTGKTMTADTRRSSVTGTTMGENKSRSADDSWASSSPTPNRSNHTACSTVSSARSSPATPRTTTAAGTPASGGYTGRXXXXXXXXXXSATRRTKDSACGESPETYSVLVSPTTSRSPHTAGSAVSTPWSFQQSARTRTQGDSTGDPAPELAWTWEEERGEGEPPDEKNAWTNARRTTGRAVRWPILPSEERKKRENEAHLRRNKSRLGVTLRGLANLECQGNFVLPEIIRMQ 534
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BLAST of mRNA_E-siliculosus-1a_F_contig1376.2245.1 vs. uniprot
Match: A0A6H5KNB2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNB2_9PHAE)

HSP 1 Score: 647 bits (1668), Expect = 7.330e-214
Identity = 390/482 (80.91%), Postives = 401/482 (83.20%), Query Frame = 0 
Query:  170 MAVLGAYNGLRDIVPTLSSLTCRSRKHRQRNRVAASAPLFGSDAARISTDGVVALSSSSHPAAKTEVVVQRAIASDDTERRDQGPDSREGEHGASAEAPNSGEGTPGRTAKGGTQDTRGNNNSSEAAQTAEREATIVLWALRDAAARVVQEEIRCFARRKRWLLLGTGQRQREPEE--HGDEGRSKSTVGVESPTGTGVVYQPEVAGGLPWAIAAGVSPIAPSSASFSSSSAKATTERXTMAGTSSATGGSTGITMTTDTRRSPATM--MWENKSRSAYDSWALSSPTPNRSTHTAGSTVSSARSSPATPRTTTAAGTPASGGYTGRTXXXXXXXXSSATRRTKDSSCGESQETSSFLVSPTTSRSPHTAGSAVSTPWSFQQSARTRTQGDSKGDPAPELAWTWGEEGAEGEPPDEKHTWTDARRTTSRAVRWPILPSEERKKRENEAHLRRNKSRLSVTLRGLANLECQGNFVLPEIIRMQ 647
            MA+L AYNGLRD+VPTLS LTCRSRK R RNR AASAPLFGSDA   STD VVAL SSSHPAAKTEVVVQRAIAS+DTER DQGPDSREGE GASA APNSGE TP RTAKGGTQDTRGNN SSEAA  AERE TIVLWALRDAAARVVQEE+RCFARRKRWLL  TGQRQREP E  HGDEGRS STVGVESPTGTGVVY+PEVAGGLPWAIAAGVSPIAPSSASFSSSSA+ TT R TMAGTSSATGGSTGITMT DTRR+PAT   M ENK +SA +SWA SSPTPNRSTHTA  TVSS RSS ATPRTTTAAGTPASGG     XXXXXXXX                           SRSPHTAGSAVSTPW+FQQS RTRTQG SKGDPAPELAWTW EE  EGEPPDE+HTWTDARRTTSRA RWP LPSEERKKRENEAHLRRNKSRL VTLRG ANLECQGNFVLPEIIRMQ
Sbjct:    1 MAILDAYNGLRDLVPTLSRLTCRSRKDRPRNRAAASAPLFGSDADMTSTDVVVALPSSSHPAAKTEVVVQRAIASEDTERPDQGPDSREGEDGASAVAPNSGECTPDRTAKGGTQDTRGNNKSSEAAHAAEREMTIVLWALRDAAARVVQEEMRCFARRKRWLLFRTGQRQREPGEGEHGDEGRSMSTVGVESPTGTGVVYRPEVAGGLPWAIAAGVSPIAPSSASFSSSSARVTTGRTTMAGTSSATGGSTGITMTADTRRNPATRTTMGENKRKSADESWASSSPTPNRSTHTACLTVSSVRSSRATPRTTTAAGTPASGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRSPHTAGSAVSTPWTFQQSTRTRTQGISKGDPAPELAWTWEEERGEGEPPDEEHTWTDARRTTSRAARWPKLPSEERKKRENEAHLRRNKSRLGVTLRGFANLECQGNFVLPEIIRMQ 482
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1376.2245.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LN60_ECTSI1.210e-28688.39Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KNB2_9PHAE7.330e-21480.91Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000048IQ motif, EF-hand binding sitePROSITEPS50096IQcoord: 114..140
score: 7.309
IPR000048IQ motif, EF-hand binding sitePROSITEPS50096IQcoord: 642..668
score: 6.742

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1376contigE-siliculosus-1a_F_contig1376:1027..6383 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1376.2245.1mRNA_E-siliculosus-1a_F_contig1376.2245.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1376 1027..6383 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1376.2245.1 ID=prot_E-siliculosus-1a_F_contig1376.2245.1|Name=mRNA_E-siliculosus-1a_F_contig1376.2245.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=747bp
DTEDRQQITAHVDEVRAVIGRMGHTLYMARVRSELRAAIKAQGQKRAAAA
LDCEQEIGDGQAIAGGLKVNAREASGPETPEGMENGEERKAALGLRCCRA
EDPEIKSPRERYLRRMAAVCLQRHARGRPQRRVFRELVRPALHIYVARGS
PQISPFGIGDRRAILLARFMAVLGAYNGLRDIVPTLSSLTCRSRKHRQRN
RVAASAPLFGSDAARISTDGVVALSSSSHPAAKTEVVVQRAIASDDTERR
DQGPDSREGEHGASAEAPNSGEGTPGRTAKGGTQDTRGNNNSSEAAQTAE
REATIVLWALRDAAARVVQEEIRCFARRKRWLLLGTGQRQREPEEHGDEG
RSKSTVGVESPTGTGVVYQPEVAGGLPWAIAAGVSPIAPSSASFSSSSAK
ATTERTTMAGTSSATGGSTGITMTTDTRRSPATMMWENKSRSAYDSWALS
SPTPNRSTHTAGSTVSSARSSPATPRTTTAAGTPASGGYTGRTTTAGTTG
SSSATRRTKDSSCGESQETSSFLVSPTTSRSPHTAGSAVSTPWSFQQSAR
TRTQGDSKGDPAPELAWTWGEEGAEGEPPDEKHTWTDARRTTSRAVRWPI
LPSEERKKRENEAHLRRNKSRLSVTLRGLANLECQGNFVLPEIIRMQRLF
RSRRTRRIYERGQAHREAHQAEWKAKTVRERQEREARWKSSMSRLKFEHP
PNQMKQLGDVAGLVARVVSGSSNEDDDGVARLAVFAELTGKASPSS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000048IQ_motif_EF-hand-BS