prot_E-siliculosus-1a_F_contig137.2211.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig137.2211.1
Unique Nameprot_E-siliculosus-1a_F_contig137.2211.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length163
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig137.2211.1 vs. uniprot
Match: D7FWG4_ECTSI (Aminoacyl-tRNA hydrolase n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWG4_ECTSI)

HSP 1 Score: 328 bits (841), Expect = 8.080e-114
Identity = 158/162 (97.53%), Postives = 161/162 (99.38%), Query Frame = 0
Query:    1 VHWLSSRRRRREPVSRGDAEFEEEFEEEERALQSNGGARAWSLDDGPFKLVLIVNMQLKMGKGKAMAQCCHATLGNYRISERHCPSALRGWEHMGQAKICVKCPTETELYDIQAKAQAAGLVNYLVMDAGHTQIAAGSRTVLALGPAPVWAFEGISSHLKLM 162
            +HWLSSRRRRREPVSRGDAEFEEEFEEEERALQSNGGARAWSLDDGPFKLVLIVNMQLKMGKGK +AQCCHATLGNYRISERHCPSALRGWEHMGQAKICVKCPTETELYDIQAKAQ+AGLVNYLVMDAGHTQIAAGSRTVLALGPAPVWAFEGISSHLKLM
Sbjct:    1 MHWLSSRRRRREPVSRGDAEFEEEFEEEERALQSNGGARAWSLDDGPFKLVLIVNMQLKMGKGKVVAQCCHATLGNYRISERHCPSALRGWEHMGQAKICVKCPTETELYDIQAKAQSAGLVNYLVMDAGHTQIAAGSRTVLALGPAPVWAFEGISSHLKLM 162          
BLAST of mRNA_E-siliculosus-1a_F_contig137.2211.1 vs. uniprot
Match: A0A836C8I9_9STRA (Aminoacyl-tRNA hydrolase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8I9_9STRA)

HSP 1 Score: 182 bits (462), Expect = 1.450e-55
Identity = 81/124 (65.32%), Postives = 101/124 (81.45%), Query Frame = 0
Query:   39 RAWSLDDGPFKLVLIVNMQLKMGKGKAMAQCCHATLGNYRISERHCPSALRGWEHMGQAKICVKCPTETELYDIQAKAQAAGLVNYLVMDAGHTQIAAGSRTVLALGPAPVWAFEGISSHLKLM 162
            R W++DDGPFKLVL+VN +LKMGKGK  AQCCHATLG Y+ + RH P+ ++ WE++ QAKICVKCP E+E++ I+ KA+AAGLV Y+V DAG TQI +GSRTVL +GPAP  AF GI+ HLKLM
Sbjct:   77 RDWTIDDGPFKLVLVVNSELKMGKGKVAAQCCHATLGCYKTARRHAPNCVKSWEYLAQAKICVKCPEESEMWQIREKAEAAGLVTYMVADAGRTQIPSGSRTVLGIGPAPETAFLGITDHLKLM 200          
BLAST of mRNA_E-siliculosus-1a_F_contig137.2211.1 vs. uniprot
Match: A0A7S3MCE7_9STRA (Aminoacyl-tRNA hydrolase n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MCE7_9STRA)

HSP 1 Score: 167 bits (424), Expect = 5.600e-50
Identity = 77/123 (62.60%), Postives = 97/123 (78.86%), Query Frame = 0
Query:   40 AWSLDDGPFKLVLIVNMQLKMGKGKAMAQCCHATLGNYRISERHCPSALRGWEHMGQAKICVKCPTETELYDIQAKAQAAGLVNYLVMDAGHTQIAAGSRTVLALGPAPVWAFEGISSHLKLM 162
            +++ +DGPFKL+L VN  L MGKGK  AQCCHATLG Y+I+ ++C +A+  WE  GQAK+ VK  TE E+ D+QAKA AAGLV Y V D G TQIAAGSRTVLA+GPAP +AF+G++SHLKL+
Sbjct:   65 SYTEEDGPFKLILCVNNSLSMGKGKVAAQCCHATLGAYKIAIKYCQTAVENWEDDGQAKVAVKVDTEAEMADLQAKAMAAGLVTYFVQDEGRTQIAAGSRTVLAIGPAPAYAFQGLTSHLKLL 187          
BLAST of mRNA_E-siliculosus-1a_F_contig137.2211.1 vs. uniprot
Match: A0A7S0XWF5_HEMAN (Aminoacyl-tRNA hydrolase n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0XWF5_HEMAN)

HSP 1 Score: 158 bits (399), Expect = 6.110e-47
Identity = 75/129 (58.14%), Postives = 96/129 (74.42%), Query Frame = 0
Query:   34 SNGGARAWSLDDGPFKLVLIVNMQLKMGKGKAMAQCCHATLGNYRISERHCPSALRGWEHMGQAKICVKCPTETELYDIQAKAQAAGLVNYLVMDAGHTQIAAGSRTVLALGPAPVWAFEGISSHLKLM 162
            + G   +WS+ DGP K+VL+VN +LKMGKGK  AQC HATLG Y+ +    P  LR WE +GQAKICV+CPTE E++++  KA+A GL+ Y V DAG TQI AGSRTVLA+GPAP  AF+G++ H KL+
Sbjct:    6 AGGTQGSWSVVDGPGKMVLVVNQELKMGKGKIAAQCGHATLGAYKKAS---PQVLRMWEGLGQAKICVQCPTEAEMHEVADKARAKGLITYQVTDAGRTQIPAGSRTVLAIGPAPESAFKGVTDHFKLL 131          
BLAST of mRNA_E-siliculosus-1a_F_contig137.2211.1 vs. uniprot
Match: K0SKQ3_THAOC (Aminoacyl-tRNA hydrolase n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SKQ3_THAOC)

HSP 1 Score: 157 bits (397), Expect = 6.710e-46
Identity = 75/130 (57.69%), Postives = 94/130 (72.31%), Query Frame = 0
Query:   33 QSNGGARAWSLDDGPFKLVLIVNMQLKMGKGKAMAQCCHATLGNYRISERHCPSALRGWEHMGQAKICVKCPTETELYDIQAKAQAAGLVNYLVMDAGHTQIAAGSRTVLALGPAPVWAFEGISSHLKLM 162
            ++N  + AW + D P+K+VL VN  L MGKGK  AQC HA +G Y+ ++RHC + L  WE  G AKI VKCP+E E+ +I AKA + G+  YLV DAG TQIAAGSRTVL LGPAPV  F+G+S+HLKLM
Sbjct:   57 EANCPSSAWGISDAPYKMVLCVNTSLSMGKGKIAAQCGHAAVGCYKRAKRHCQAGLSAWERTGCAKIAVKCPSEDEMDEIAAKALSRGIPIYLVEDAGRTQIAAGSRTVLGLGPAPVREFDGVSNHLKLM 186          
BLAST of mRNA_E-siliculosus-1a_F_contig137.2211.1 vs. uniprot
Match: A0A7S4K0G8_9STRA (Aminoacyl-tRNA hydrolase n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4K0G8_9STRA)

HSP 1 Score: 157 bits (396), Expect = 1.250e-45
Identity = 74/125 (59.20%), Postives = 89/125 (71.20%), Query Frame = 0
Query:   38 ARAWSLDDGPFKLVLIVNMQLKMGKGKAMAQCCHATLGNYRISERHCPSALRGWEHMGQAKICVKCPTETELYDIQAKAQAAGLVNYLVMDAGHTQIAAGSRTVLALGPAPVWAFEGISSHLKLM 162
            AR W +++ P+K+VL VN  LKMGKGK  AQCCHA +G Y+ + + CP  +R WE  G AKI VKCP + E+  I   A   G+  YLV DAG TQIAAGSRTVL LGPAPV AFEG++SHLKLM
Sbjct:   71 ARLWGMNNAPYKMVLCVNQDLKMGKGKIAAQCCHAAVGCYKRARKVCPDGVRAWEQTGCAKIAVKCPNQDEIEVILVAAHKRGIPLYLVADAGRTQIAAGSRTVLGLGPAPVSAFEGVTSHLKLM 195          
BLAST of mRNA_E-siliculosus-1a_F_contig137.2211.1 vs. uniprot
Match: A0A7S4VM04_9STRA (Aminoacyl-tRNA hydrolase n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4VM04_9STRA)

HSP 1 Score: 158 bits (400), Expect = 2.060e-45
Identity = 77/129 (59.69%), Postives = 91/129 (70.54%), Query Frame = 0
Query:   34 SNGGARAWSLDDGPFKLVLIVNMQLKMGKGKAMAQCCHATLGNYRISERHCPSALRGWEHMGQAKICVKCPTETELYDIQAKAQAAGLVNYLVMDAGHTQIAAGSRTVLALGPAPVWAFEGISSHLKLM 162
            +N  A  W +   P+K+VL VN +LKMG GK MAQC HA +G Y+ S + CP+AL+ WE  G AKI VKCP ETEL  I  KA + G+  YLV DAG TQIAAGSRTVL LGPAPV  FEG++ HLKLM
Sbjct:  133 ANVAASQWGIMHAPYKMVLCVNQELKMGPGKKMAQCSHAAVGCYKRSLKQCPAALKAWERTGCAKIAVKCPNETELISILEKAHSKGIPCYLVEDAGRTQIAAGSRTVLGLGPAPVDVFEGVTDHLKLM 261          
BLAST of mRNA_E-siliculosus-1a_F_contig137.2211.1 vs. uniprot
Match: L1JZ89_GUITC (Aminoacyl-tRNA hydrolase (Fragment) n=2 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JZ89_GUITC)

HSP 1 Score: 152 bits (385), Expect = 4.530e-45
Identity = 71/112 (63.39%), Postives = 88/112 (78.57%), Query Frame = 0
Query:   51 VLIVNMQLKMGKGKAMAQCCHATLGNYRISERHCPSALRGWEHMGQAKICVKCPTETELYDIQAKAQAAGLVNYLVMDAGHTQIAAGSRTVLALGPAPVWAFEGISSHLKLM 162
            VL+VN +LKMGKGK  AQC HA LG Y+  +++ PSAL  WE  GQAKICV+CPTE E+++I  KA A GL+ Y+VMDAG TQIAAGSRTVLA+GPAP   F+G++ HLKL+
Sbjct:    1 VLVVNQELKMGKGKIAAQCGHAVLGAYKRGKKYAPSALTWWEKFGQAKICVQCPTEDEMWEIAKKAGAKGLITYIVMDAGRTQIAAGSRTVLAIGPAPEQQFKGLTDHLKLL 112          
BLAST of mRNA_E-siliculosus-1a_F_contig137.2211.1 vs. uniprot
Match: A0A7S2MVX1_9STRA (Aminoacyl-tRNA hydrolase n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2MVX1_9STRA)

HSP 1 Score: 155 bits (392), Expect = 8.790e-45
Identity = 80/145 (55.17%), Postives = 97/145 (66.90%), Query Frame = 0
Query:   18 DAEFEEEFEEEERALQSNGGARAWSLDDGPFKLVLIVNMQLKMGKGKAMAQCCHATLGNYRISERHCPSALRGWEHMGQAKICVKCPTETELYDIQAKAQAAGLVNYLVMDAGHTQIAAGSRTVLALGPAPVWAFEGISSHLKLM 162
            D+E ++E+E    A   N  ++ W +  GP+K+VL VN +L MGKGK  AQCCHA +G Y+ S + CP+ L+ WE  G AKI +KCP E EL  I  KA   G+  YLV DAG TQI AGSRTVL LGPAPV  FEGIS HLKLM
Sbjct:   73 DSESDDEYEVGGGA---NVSSKEWGMMHGPYKMVLCVNQELGMGKGKIAAQCCHAAVGCYKRSLKQCPNGLKAWERTGCAKIALKCPNEQELTSILEKAYNKGIPCYLVEDAGRTQIKAGSRTVLGLGPAPVDVFEGISDHLKLM 214          
BLAST of mRNA_E-siliculosus-1a_F_contig137.2211.1 vs. uniprot
Match: A0A7S2YD90_9STRA (Aminoacyl-tRNA hydrolase n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YD90_9STRA)

HSP 1 Score: 150 bits (378), Expect = 4.900e-43
Identity = 73/130 (56.15%), Postives = 91/130 (70.00%), Query Frame = 0
Query:   33 QSNGGARAWSLDDGPFKLVLIVNMQLKMGKGKAMAQCCHATLGNYRISERHCPSALRGWEHMGQAKICVKCPTETELYDIQAKAQAAGLVNYLVMDAGHTQIAAGSRTVLALGPAPVWAFEGISSHLKLM 162
            + +  A  W + + P+K+VL VN  L MGKGK  AQCCHA +G Y+ + +  P+A++ WE  G AKI VKCP+E E+  I AKA + G+  YLV DAG TQIAAGSRTVL LGPAPV  FEG+S HLKLM
Sbjct:   56 EPSADASKWGMFNSPYKMVLCVNTSLSMGKGKIAAQCCHAAVGCYKRANKTIPNAVKAWECTGCAKIAVKCPSEEEMDLICAKAMSKGIPVYLVEDAGRTQIAAGSRTVLGLGPAPVSVFEGVSDHLKLM 185          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig137.2211.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FWG4_ECTSI8.080e-11497.53Aminoacyl-tRNA hydrolase n=2 Tax=Ectocarpus silicu... [more]
A0A836C8I9_9STRA1.450e-5565.32Aminoacyl-tRNA hydrolase n=1 Tax=Tribonema minus T... [more]
A0A7S3MCE7_9STRA5.600e-5062.60Aminoacyl-tRNA hydrolase n=1 Tax=Spumella elongata... [more]
A0A7S0XWF5_HEMAN6.110e-4758.14Aminoacyl-tRNA hydrolase n=2 Tax=Hemiselmis anders... [more]
K0SKQ3_THAOC6.710e-4657.69Aminoacyl-tRNA hydrolase n=1 Tax=Thalassiosira oce... [more]
A0A7S4K0G8_9STRA1.250e-4559.20Aminoacyl-tRNA hydrolase n=1 Tax=Odontella aurita ... [more]
A0A7S4VM04_9STRA2.060e-4559.69Aminoacyl-tRNA hydrolase n=3 Tax=Ditylum brightwel... [more]
L1JZ89_GUITC4.530e-4563.39Aminoacyl-tRNA hydrolase (Fragment) n=2 Tax=Guilla... [more]
A0A7S2MVX1_9STRA8.790e-4555.17Aminoacyl-tRNA hydrolase n=1 Tax=Helicotheca tames... [more]
A0A7S2YD90_9STRA4.900e-4356.15Aminoacyl-tRNA hydrolase n=1 Tax=Amphiprora paludo... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002833Peptidyl-tRNA hydrolase, PTH2PFAMPF01981PTH2coord: 49..162
e-value: 3.1E-38
score: 130.7
IPR002833Peptidyl-tRNA hydrolase, PTH2TIGRFAMTIGR00283TIGR00283coord: 49..162
e-value: 6.2E-35
score: 117.9
IPR002833Peptidyl-tRNA hydrolase, PTH2PANTHERPTHR12649PEPTIDYL-TRNA HYDROLASE 2coord: 21..162
IPR023476Peptidyl-tRNA hydrolase II domain superfamilyGENE3D3.40.1490.10coord: 47..162
e-value: 3.8E-41
score: 141.7
IPR023476Peptidyl-tRNA hydrolase II domain superfamilySUPERFAMILY102462Peptidyl-tRNA hydrolase IIcoord: 47..162

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig137contigE-siliculosus-1a_F_contig137:41586..45070 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig137.2211.1mRNA_E-siliculosus-1a_F_contig137.2211.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig137 41586..45070 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig137.2211.1 ID=prot_E-siliculosus-1a_F_contig137.2211.1|Name=mRNA_E-siliculosus-1a_F_contig137.2211.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=163bp
VHWLSSRRRRREPVSRGDAEFEEEFEEEERALQSNGGARAWSLDDGPFKL
VLIVNMQLKMGKGKAMAQCCHATLGNYRISERHCPSALRGWEHMGQAKIC
VKCPTETELYDIQAKAQAAGLVNYLVMDAGHTQIAAGSRTVLALGPAPVW
AFEGISSHLKLM*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023476Pep_tRNA_hydro_II_dom_sf
IPR002833PTH2