prot_E-siliculosus-1a_F_contig1369.2197.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1369.2197.1
Unique Nameprot_E-siliculosus-1a_F_contig1369.2197.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length548
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1369.2197.1 vs. uniprot
Match: A0A6H5L6Q5_9PHAE (SREBP regulating gene protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6Q5_9PHAE)

HSP 1 Score: 536 bits (1380), Expect = 1.740e-183
Identity = 445/559 (79.61%), Postives = 454/559 (81.22%), Query Frame = 0
Query:    1 MDATPRFRLFDNRRGSSNQMDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-AACGAGVLASARLLARASLSYYSSWPSSSSLPGYLHSSGAGSADXXXXXXXXXXXXXDRHKH---RRPAVSLGPDAIPSVLLVERGPSGLPSGPALPGGARKASSLVDAAGAVPGXXXXXXXXXXXXXXRDNRSNPYRCRNTVQGATLVADSEGRVCHRAELAVEEGDDDDVRHRPGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPLSVPTTTRTQTRRGGEGGVGVELVAL---AHGXXXXXXXXXX-----EEALSTPFSCWSCDVGEDGPSGSNGGVNDSPSFSSCCSSYEFCVSCCQNPQRGEEREAIQASAALSGHPAYRDLLGSGNNDAANRRXXXXXRQLRASAAAAEAGAVEKSEXXXAEERDARELAFAHCAFRCRTYSGSVAHENSYRSPLKHCFGRFRPPAASAAAAALPGGWGGVVEGGESRGAPPLQLDPLLFGLAEP 547
            MDATPRFRLFDNRRGSSNQMD            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX AACGAGVLASARLLARASLSY SSWPSSSSLPGYLHSSGAGS DXXXXXXXXXXXXX        RRPAVSLGPDAIPSVLLVERGPSGLPSGPALPGGARKASSLVD  GAV G              R+N SNPYRCRNTVQGATLVADSEGRVCHRAEL VEEGDD  VRHRPG XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX               P S P TTRT+TRRG EGGV VELV L   AHGXXXXXXXXXX     EEALSTPFSCWSCDVGEDGPSG+              SSYEFCVSCCQNPQRG+EREAIQASAALSGHPAYRDLLG GNNDA+NRR     RQL+AS AAAEAG VEKS+   AEERDARE+AFAHCAFRCRTYSGSV HENSYRSPLKHCFGRFRPPAASAAAAALPGG  GVVEG ESRGAPP Q+DPLLF LAEP
Sbjct:    1 MDATPRFRLFDNRRGSSNQMDEEAGQATATLPRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAACGAGVLASARLLARASLSY-SSWPSSSSLPGYLHSSGAGSTDXXXXXXXXXXXXXXXXXXXXXRRPAVSLGPDAIPSVLLVERGPSGLPSGPALPGGARKASSLVDVTGAVLGDGGGGGEIRGGEG-RENSSNPYRCRNTVQGATLVADSEGRVCHRAELIVEEGDDXXVRHRPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDKHKHPPAA------PHSGPATTRTETRRGVEGGVSVELVELGELAHGXXXXXXXXXXXXFPPEEALSTPFSCWSCDVGEDGPSGNXXXXXXXXXXXXXXSSYEFCVSCCQNPQRGKEREAIQASAALSGHPAYRDLLGPGNNDASNRRELPPPRQLQASHAAAEAG-VEKSQEE-AEERDAREMAFAHCAFRCRTYSGSVVHENSYRSPLKHCFGRFRPPAASAAAAALPGGRAGVVEGRESRGAPPHQVDPLLFDLAEP 549          
BLAST of mRNA_E-siliculosus-1a_F_contig1369.2197.1 vs. uniprot
Match: D7FXG4_ECTSI (SREBP regulating gene protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXG4_ECTSI)

HSP 1 Score: 504 bits (1299), Expect = 3.200e-171
Identity = 441/554 (79.60%), Postives = 445/554 (80.32%), Query Frame = 0
Query:    1 MDATPRFRLFDNRRGSS-NQMDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAA----CGAGVLASARLLARASLSYYSSWPSSSSLPGYLHSSGAGSADXXXXXXXXXXXXXDRHKHRRPAVSLGPDAIPSVLLVERGPSGLPSGPALPGGARKASSLVDAAGAVPGXXXXXXXXXXXXXXRDNRSNPYRCRNTVQGATLVADSEGRVCHRAELAVEEGDDDDVRHRPGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPLSVPTTTRTQTRRGGEGGVGVELVALAHGXXXXXXXXXX-EEALSTPFSCWSCDVGEDGPSGSNGGVNDSPSFSSCCSSYEFCVSCCQNPQRGEEREAIQASAALSGHPAYRDLLGSGNNDAANRRXXXXXRQLRASAAAAEAGAVEKS-EXXXAEERDARELAFAHCAFRCRTYSGSVAHENSYRSPLKHCFGRFRPPAASAAAAALPGGWGGVVEGGESRGAPPLQLDPLLFGLAEP 547
            MDATPRFRLFDNRRGSS NQMD             XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX      CGAGVLASARLLARAS S+ SSWPSSSS PGYLHSSGAG   XXXXXXXXXXXXX     RRPAVSLGPDAIPSVLLVERGPSGLPSGPALPGGARKASSLVD AGAVPG              R+N SNPYRCRNTVQGATLVADSEGRVCHRAEL VEEGD          XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                              XXXXXXXXXX EEALSTPFSCWSCDVGEDGPSGSNGG NDSPSFSSCCSSYEFCVSCCQNPQRGEEREAIQASAALSGHPAYRDLLGSGNNDAAN R  XXX          EAG VEK+ +   AEERDARELAFAHCAFRCRTYSGSVAHENSYRSPLKHCFGRFRPPAASAAAAALPGGWGGVVEGGESRGAPPLQLDPLLF LAEP
Sbjct:    1 MDATPRFRLFDNRRGSSINQMDEEAGRQTATTLPRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGAGVLASARLLARASSSH-SSWPSSSSAPGYLHSSGAGXXXXXXXXXXXXXXXXXXXXXRRPAVSLGPDAIPSVLLVERGPSGLPSGPALPGGARKASSLVDPAGAVPGGGGGETRGGRG---RENSSNPYRCRNTVQGATLVADSEGRVCHRAELVVEEGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEALSTPFSCWSCDVGEDGPSGSNGGGNDSPSFSSCCSSYEFCVSCCQNPQRGEEREAIQASAALSGHPAYRDLLGSGNNDAANGREPXXXXXXXXXXXXXEAGGVEKNGQQVEAEERDARELAFAHCAFRCRTYSGSVAHENSYRSPLKHCFGRFRPPAASAAAAALPGGWGGVVEGGESRGAPPLQLDPLLFALAEP 550          
BLAST of mRNA_E-siliculosus-1a_F_contig1369.2197.1 vs. uniprot
Match: T0QMQ3_SAPDV (SREBP regulating gene protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0QMQ3_SAPDV)

HSP 1 Score: 62.0 bits (149), Expect = 1.000e-6
Identity = 49/157 (31.21%), Postives = 57/157 (36.31%), Query Frame = 0
Query:  352 ALSTPFSCWSCDVGEDGPSGSNGGVNDSPSFSSCCSSYEFCVSCCQNPQRGE--EREAIQASAALSGHPAYRDLLGSGNNDAANRRXXXXXRQLRASAAAAEAGAVEKSEXXXAEERDARELAFAHCAFRCRTYSGSVAHENSYRSPLKHCFGRFRP 506
            A +  FSC SC+V                +   CCS YE CVSCC +P   E      + A+ A   HP Y                                GA                  F  CAFRCRT S SV H+NSYRS  KHC+G  RP
Sbjct:  207 ASTVTFSCTSCNV----------------AAPHCCSEYERCVSCCMSPDHREILRHFLLHANPA---HPVY--------------------------------GAPHHLSV------------FGFCAFRCRTSSASVQHQNSYRSTKKHCYGLHRP 300          
BLAST of mRNA_E-siliculosus-1a_F_contig1369.2197.1 vs. uniprot
Match: A0A067CTZ4_SAPPC (SREBP regulating gene protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067CTZ4_SAPPC)

HSP 1 Score: 59.7 bits (143), Expect = 5.710e-6
Identity = 47/155 (30.32%), Postives = 57/155 (36.77%), Query Frame = 0
Query:  354 STPFSCWSCDVGEDGPSGSNGGVNDSPSFSSCCSSYEFCVSCCQNPQRGEEREAIQASA--ALSGHPAYRDLLGSGNNDAANRRXXXXXRQLRASAAAAEAGAVEKSEXXXAEERDARELAFAHCAFRCRTYSGSVAHENSYRSPLKHCFGRFRP 506
            ++ FSC SC                S +   CCS+YE CVSCC  P   + RE ++     A   HP Y                                GA                  F  CAFRCR+ S SV H+NSYRS  KHC+G  RP
Sbjct:  207 ASAFSCTSC----------------SAAAPHCCSAYERCVSCCMGP---DHREMVRHFLLHATPAHPVY--------------------------------GAPHHLSV------------FGFCAFRCRSSSASVQHQNSYRSSRKHCYGLHRP 298          
BLAST of mRNA_E-siliculosus-1a_F_contig1369.2197.1 vs. uniprot
Match: A0A7S3UXD3_HETAK (SREBP regulating gene protein n=4 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UXD3_HETAK)

HSP 1 Score: 58.5 bits (140), Expect = 1.450e-5
Identity = 36/126 (28.57%), Postives = 49/126 (38.89%), Query Frame = 0
Query:  381 SFSSCCSSYEFCVSCCQNPQRGEEREAIQASAALSGHPAYRDLLGSGNNDAANRRXXXXXRQLRASAAAAEAGAVEKSEXXXAEERDARELAFAHCAFRCRTYSGSVAHENSYRSPLKHCFGRFRP 506
            S S CC  YE CVSCC +P     R+ ++   + S H  Y+                                                 L F  C ++CRT SGSV +ENSYR+P+K+C+G   P
Sbjct:  105 SGSHCCQEYEMCVSCCMDPAN---RDVLEKFKSQSTHFVYQHTP----------------------------------------------LGFEFCRYKCRTSSGSVQNENSYRNPVKYCYGELLP 181          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1369.2197.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5L6Q5_9PHAE1.740e-18379.61SREBP regulating gene protein n=1 Tax=Ectocarpus s... [more]
D7FXG4_ECTSI3.200e-17179.60SREBP regulating gene protein n=1 Tax=Ectocarpus s... [more]
T0QMQ3_SAPDV1.000e-631.21SREBP regulating gene protein n=1 Tax=Saprolegnia ... [more]
A0A067CTZ4_SAPPC5.710e-630.32SREBP regulating gene protein n=1 Tax=Saprolegnia ... [more]
A0A7S3UXD3_HETAK1.450e-528.57SREBP regulating gene protein n=4 Tax=Heterosigma ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019352Uncharacterised protein family UPF0454PFAMPF10218DUF2054coord: 220..247
e-value: 1.2E-4
score: 22.2
coord: 456..501
e-value: 5.1E-7
score: 29.8
coord: 354..411
e-value: 4.5E-7
score: 30.0
IPR019352Uncharacterised protein family UPF0454PANTHERPTHR13481UNCHARACTERIZEDcoord: 213..413
coord: 467..502
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 79..100
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..78
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 101..547
NoneNo IPR availableTMHMMTMhelixcoord: 79..101

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1369contigE-siliculosus-1a_F_contig1369:5333..6976 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1369.2197.1mRNA_E-siliculosus-1a_F_contig1369.2197.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1369 5333..7490 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1369.2197.1 ID=prot_E-siliculosus-1a_F_contig1369.2197.1|Name=mRNA_E-siliculosus-1a_F_contig1369.2197.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=548bp
MDATPRFRLFDNRRGSSNQMDEEAGQTTTLPRRRMLTSSVAVARQRRRNR
RRPGARRGLAALVPRLLASSAPRASRRRALLLLLVLAACGAGVLASARLL
ARASLSYYSSWPSSSSLPGYLHSSGAGSADRDDDDGDDDNAAADRHKHRR
PAVSLGPDAIPSVLLVERGPSGLPSGPALPGGARKASSLVDAAGAVPGGG
GGGGGETRGGGGRDNRSNPYRCRNTVQGATLVADSEGRVCHRAELAVEEG
DDDDVRHRPGCCAARPPALPQIPPRDGGDGGGGGGGGGGDLAASSPPAAD
DKHKHPPAAPLSVPTTTRTQTRRGGEGGVGVELVALAHGGGGGGGVVPPE
EALSTPFSCWSCDVGEDGPSGSNGGVNDSPSFSSCCSSYEFCVSCCQNPQ
RGEEREAIQASAALSGHPAYRDLLGSGNNDAANRRGPPPPRQLRASAAAA
EAGAVEKSEQEEAEERDARELAFAHCAFRCRTYSGSVAHENSYRSPLKHC
FGRFRPPAASAAAAALPGGWGGVVEGGESRGAPPLQLDPLLFGLAEP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019352UPF0454