prot_E-siliculosus-1a_F_contig1363.2170.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1363.2170.1
Unique Nameprot_E-siliculosus-1a_F_contig1363.2170.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length718
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig1363.2170.1 vs. uniprot
Match: D8LGT4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGT4_ECTSI)

HSP 1 Score: 670 bits (1728), Expect = 9.170e-223
Identity = 474/671 (70.64%), Postives = 479/671 (71.39%), Query Frame = 0 
Query:   44 MMRAVNSCRSVAVSDAILAAQSAFEGGEFQPEAFPRCVCLLLEAFEGGDNAIKLSAARLLERCRPYFGGNILAVEVAQRVSQVLGYHDDPTTRELCLDVLSAVTFGTGGLPRGILLDIGRSLRSPFLTERRAAARAYASCMCAHRSXXXXXXXXXXXXXXXXXXXXXPGLTPRTLEEMSALSSALLPLLSCEGGDARVSGWRGGGGGREGGRFPPRGVEELLEAVLWKVSGDLPSTELWESLKVFLLDEDTSSSSPP----ETQLNVTALVDLVLHRLRRNNSASGQASXXXXXA--PGASNPAMRAIAVDFFVSLIHVEAVERSKFAMAAAEAAVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------KAAPRATPPTPGRSSVWRLLDAVSVASEAHGEKAELLSVLGAPALAVAVLEAEAVAGAKSAGKMAAAHGFGDAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXACASSLVSYSVAAFRETPFYPADGGISDSAARRDKALAALAEFAADGVLSSLPVLRLLSSRGIGGGXXXXXXAGARLLLPQLRALAAVHAWPRQRVALAVARSLRRVPPTSALAVELAVLVSHVVRAGEGHDKGGXXXXXXXXXXGERLGDLERVLWELLFGRRFCDDNPKA 702
            MMRAVNSCRSVAVSDAILAAQS FEGGEFQPEAFPRCVCLLLEAFEGGDNAIKLSAARLLERCRPYFGGN+LAVEVAQRVSQVLGYHDDPTTRELCLDVLSAVTFGTGGLPRGILLDIGRSLRSPFL                                                                                                     VSGDLPSTELWESLKVFLLDEDTS         ETQLNVTALVDLVLHRLR N        XXXXX   PGASNPA+RA+AVDFFVSLIHVEAVERSKFAMAAAEAAVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX      KAAPRATPPTPGRSSVWRLLDAVS ASEAHGEKAELLSVLGAPA+AVAVLEAEAVAGAKSAGKMA+                                                    ACASSLVSYS AAFRETPFYPADGGISDSAARRDKALAALAEFAADGVLSSLPVLRLLSSRGI GG      AGARLLLPQLRALAAVHAWPRQRVALAVARSLRRVPPTSALAVELAVLVSHVVRAGEG DKG XXXXXXXXXXGERLGDLERVLWELLFGRRFCDDNPKA
Sbjct:    1 MMRAVNSCRSVAVSDAILAAQSTFEGGEFQPEAFPRCVCLLLEAFEGGDNAIKLSAARLLERCRPYFGGNVLAVEVAQRVSQVLGYHDDPTTRELCLDVLSAVTFGTGGLPRGILLDIGRSLRSPFLA----------------------------------------------------------------------------------------------------VSGDLPSTELWESLKVFLLDEDTSXXXXXXXXXETQLNVTALVDLVLHRLRSNXXXXXXXXXXXXXXXXPGASNPALRAMAVDFFVSLIHVEAVERSKFAMAAAEAAVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKAAPRATPPTPGRSSVWRLLDAVSAASEAHGEKAELLSVLGAPAVAVAVLEAEAVAGAKSAGKMAST------------------------------------------LSSSSVLLLACASSLVSYSGAAFRETPFYPADGGISDSAARRDKALAALAEFAADGVLSSLPVLRLLSSRGISGGGPAAA-AGARLLLPQLRALAAVHAWPRQRVALAVARSLRRVPPTSALAVELAVLVSHVVRAGEGDDKGSXXXXXXXXXXGERLGDLERVLWELLFGRRFCDDNPKA 528
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BLAST of mRNA_E-siliculosus-1a_F_contig1363.2170.1 vs. uniprot
Match: A0A6H5KB40_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB40_9PHAE)

HSP 1 Score: 661 bits (1705), Expect = 1.120e-218
Identity = 469/638 (73.51%), Postives = 478/638 (74.92%), Query Frame = 0 
Query:   74 PEAFPRCVCLLLEAFEGGDNAIKLSAARLLERCRPYFGGNILAVEVAQRVSQVLGYHDDPTTRELCLDVLSAVTFGTGGLPRGILLDIGRSLRSPFLTERRAAARAYASCMCAHRSXXXXXXXXXXXXXXXXXXXXX-PGLTPRTLEEMSALSSALLPLLSCEGGDARVSGWRGGGGGREGGRFPPRGVEELLEAVLWKVSGDLPSTELWESLKVFLLDEDTSSSSPPETQLNVTALVDLVLHRLRRNNSASGQASXXXXXAPGASNPAMRAIAVDFFVSLIHVEAVERSKFAMAAAEAAVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKAAPRATPPTPGRSSVWRLLDAVSVASEAHGEKAELLSVLGAPALAVAVLEAEAVAGAKSAGKMAAAHGFGDAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------------------------ACASSLVSYSVAAFRETPFYPADGGISDSAARRDKALAALAEFAADGVLSSLPVLRLLSSRGIGGGXXXXXXAGARLLLPQLRALAAVHAWPRQRVALAVARSLRRVPPTSALAVELAVLVSHVVRAGEGHDKGGXXXXXXXXXXGERLGDLERV 685
            PEAFPRCVCLLLEAFEGGDNAIKLSAARLLERCRPYFGGNILAVEVAQRVSQVLGYHDDPTTRELCLDVLSAVTFGTGGLPRGILLDIGRSLRSPFL ERRAAARAYASCMCAHRSXXXXXXXXXXXXXXXXXXXXX P LTPRTLEEMSALSSALLPLLSCEGGDARVSGWRGGGGGREGG F PR VEELLEAVLWKVS                                                     A     X       A+RA+AVDFFVSLIH+EAVERSKFAMAAAEAAV+XXXXXXXXXXXXXXXXXXXXXXXXXX            KAAPRATPPTPGRSSVWRLLDA SVASEAHGEKAELLSVLGAPALAVAVLEAEAVAGAKSAGKMAAAHGFGDAA   XXXXXXXXXXXX                                                      ACASSLVSYSVAAFRETPFYPADGG+SDSAARR+KALAALAEFAA+GVLSSLPVLRLLSSRGIGGG      AGARLLLPQLRALAAVHAWPRQRVALAVARSLRRVPPTSALAVELAVLVSHVVRAGE  DKGG          GE+LGDLE+ 
Sbjct:    3 PEAFPRCVCLLLEAFEGGDNAIKLSAARLLERCRPYFGGNILAVEVAQRVSQVLGYHDDPTTRELCLDVLSAVTFGTGGLPRGILLDIGRSLRSPFLAERRAAARAYASCMCAHRSXXXXXXXXXXXXXXXXXXXXXXPALTPRTLEEMSALSSALLPLLSCEGGDARVSGWRGGGGGREGGGFFPRDVEELLEAVLWKVSA----------------------------------------------------APAPAAXXXXXXXXALRAMAVDFFVSLIHMEAVERSKFAMAAAEAAVKXXXXXXXXXXXXXXXXXXXXXXXXXXTSGGASASTA--KAAPRATPPTPGRSSVWRLLDAFSVASEAHGEKAELLSVLGAPALAVAVLEAEAVAGAKSAGKMAAAHGFGDAAGGGXXXXXXXXXXXXGRVGEEAHALARIRFPLATAAVEAFRRLCTSPXXXXXXXXXXXXXXXXXXXXXXACASSLVSYSVAAFRETPFYPADGGVSDSAARREKALAALAEFAAEGVLSSLPVLRLLSSRGIGGGGPAAVAAGARLLLPQLRALAAVHAWPRQRVALAVARSLRRVPPTSALAVELAVLVSHVVRAGEVDDKGGGGEGAGTG--GEKLGDLEKA 584
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1363.2170.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LGT4_ECTSI9.170e-22370.64Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KB40_9PHAE1.120e-21873.51Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 373..393
NoneNo IPR availablePANTHERPTHR23202:SF27VERPROLIN 1, ISOFORM Gcoord: 17..463
NoneNo IPR availablePANTHERPTHR23202WASP INTERACTING PROTEIN-RELATEDcoord: 17..463
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 82..335

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1363contigE-siliculosus-1a_F_contig1363:19742..24900 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1363.2170.1mRNA_E-siliculosus-1a_F_contig1363.2170.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1363 19742..25268 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1363.2170.1 ID=prot_E-siliculosus-1a_F_contig1363.2170.1|Name=mRNA_E-siliculosus-1a_F_contig1363.2170.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=718bp
MALPLPPGRNDSRRQGVAVQQHQRGGGGAGNANNGNRKRGSVAMMRAVNS
CRSVAVSDAILAAQSAFEGGEFQPEAFPRCVCLLLEAFEGGDNAIKLSAA
RLLERCRPYFGGNILAVEVAQRVSQVLGYHDDPTTRELCLDVLSAVTFGT
GGLPRGILLDIGRSLRSPFLTERRAAARAYASCMCAHRSSPSPPPPPSSS
PGSGGPSPSPPGLTPRTLEEMSALSSALLPLLSCEGGDARVSGWRGGGGG
REGGRFPPRGVEELLEAVLWKVSGDLPSTELWESLKVFLLDEDTSSSSPP
ETQLNVTALVDLVLHRLRRNNSASGQASAAAAAAPGASNPAMRAIAVDFF
VSLIHVEAVERSKFAMAAAEAAVEAAAVAEREEQARKQEAQDEPRKKEDA
SGGGGGAAASAAKAAPRATPPTPGRSSVWRLLDAVSVASEAHGEKAELLS
VLGAPALAVAVLEAEAVAGAKSAGKMAAAHGFGDAAAGGGGGGGGGNGAF
RRLCTSPPPSTTASPSSSSSTLSSSSVLLLACASSLVSYSVAAFRETPFY
PADGGISDSAARRDKALAALAEFAADGVLSSLPVLRLLSSRGIGGGGPAA
AAAGARLLLPQLRALAAVHAWPRQRVALAVARSLRRVPPTSALAVELAVL
VSHVVRAGEGHDKGGGGGGAGAGAGGERLGDLERVLWELLFGRRFCDDNP
KARKRERERERSGGCST*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016024ARM-type_fold