prot_E-siliculosus-1a_F_contig1362.2166.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1362.2166.1
Unique Nameprot_E-siliculosus-1a_F_contig1362.2166.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length140
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1362.2166.1 vs. uniprot
Match: D7FPR8_ECTSI (Soluble NSF Attachment Protein (SNAP) Receptor (SNARE) n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPR8_ECTSI)

HSP 1 Score: 258 bits (658), Expect = 8.310e-87
Identity = 127/129 (98.45%), Postives = 129/129 (100.00%), Query Frame = 0
Query:   11 MHNAFGSQGRGGSNTGGGYYSAPTDRIRETNHNIMEMQNNAHIDDLSDQVSRLKHLTIDIGQEVRSQNDLISGMEGQMFDARGLLGGTLRRINTMMAQGGSRHMCYLVAFIVFTFMAIWYILKQTRGGR 139
            MHNAFGSQGRGGS+TGGGYYSAPTDRI+ETNHNIMEMQNNAHIDDLSDQVSRLKHLTIDIGQEVRSQNDLISGMEGQMFDARGLLGGTLRRINTMMAQGGSRHMCYLVAFIVFTFMAIWYILKQTRGGR
Sbjct:    1 MHNAFGSQGRGGSSTGGGYYSAPTDRIKETNHNIMEMQNNAHIDDLSDQVSRLKHLTIDIGQEVRSQNDLISGMEGQMFDARGLLGGTLRRINTMMAQGGSRHMCYLVAFIVFTFMAIWYILKQTRGGR 129          
BLAST of mRNA_E-siliculosus-1a_F_contig1362.2166.1 vs. uniprot
Match: A0A835YRV7_9STRA (Soluble NSF attachment protein receptor n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRV7_9STRA)

HSP 1 Score: 134 bits (336), Expect = 7.790e-38
Identity = 63/105 (60.00%), Postives = 83/105 (79.05%), Query Frame = 0
Query:   30 YSAPTDRIRETNHNIMEMQNNAHIDDLSDQVSRLKHLTIDIGQEVRSQNDLISGMEGQMFDARGLLGGTLRRINTMMAQGGSRHMCYLVAFIVFTFMAIWYILKQ 134
            Y++ + R RET  N++EM+N+ HI +LS+QVS LK LTIDIG EV SQN L+ GM   MFDA GLLGGT+++I TMM +GGS+HMCYLVAFIV TF+ IW+++ +
Sbjct:   19 YNSNSARARETARNMLEMENDRHISNLSEQVSMLKGLTIDIGNEVNSQNTLLDGMSNSMFDANGLLGGTMKKIGTMMKRGGSKHMCYLVAFIVLTFLVIWWLMGK 123          
BLAST of mRNA_E-siliculosus-1a_F_contig1362.2166.1 vs. uniprot
Match: A0A4D9D9V6_9STRA (t-SNARE coiled-coil homology domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D9V6_9STRA)

HSP 1 Score: 117 bits (293), Expect = 5.090e-31
Identity = 67/145 (46.21%), Postives = 88/145 (60.69%), Query Frame = 0
Query:    1 MRRRPENG-------EEMHNAFGSQGRGGSNTGGG----YYSAPTDRIRETNHNIMEMQNNAHIDDLSDQVSRLKHLTIDIGQEVRSQNDLISGMEGQMFDARGLLGGTLRRINTMMAQGGSRHMCYLVAFIVFTFMAIWYILKQ 134
            MRRRPE+            N+ G+ G G    G G    YYS P DR+RE++ N+ E +NN  I DL+ QVS LK LTIDIG EVRSQN L+  M        GL+G T+RR+N M+    SRHM +LVAF+VF F+ ++YI++ 
Sbjct:    1 MRRRPEDNFSSSSYMPSNSNSRGAYGGGMPQAGPGRQSNYYSTPEDRVRESSRNMFEEENNRRIGDLAGQVSMLKELTIDIGTEVRSQNHLLDDMGSGFLRTDGLMGSTMRRLNKMLTTSSSRHMLWLVAFVVFVFIFVYYIIRH 145          
BLAST of mRNA_E-siliculosus-1a_F_contig1362.2166.1 vs. uniprot
Match: B8C544_THAPS (t-SNARE coiled-coil homology domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C544_THAPS)

HSP 1 Score: 112 bits (279), Expect = 4.610e-29
Identity = 64/128 (50.00%), Postives = 85/128 (66.41%), Query Frame = 0
Query:    7 NGEEMHNAFGS-QGRGGSNTGGGYYSAPTDRIRETNHNIMEMQNNAHIDDLSDQVSRLKHLTIDIGQEVRSQNDLISGMEGQMFDARGLLGGTLRRINTMMAQGGSRHMCYLVAFIVFTFMAIWYILK 133
            NGE+M+N   S +GRGG    GG  S       ETN NIME QNN  I++LSDQV+RLK LTIDIG EVR QN L+  M     +   +L G+L RI TM+  GG++HMCYLVAF+VF  + ++++++
Sbjct:   13 NGEDMYNNLESGRGRGGXXXRGGMSS------HETNANIMENQNNDRINELSDQVARLKGLTIDIGNEVREQNSLLDNMGEGFSNVGDMLTGSLARIGTMLESGGAKHMCYLVAFVVFVMVFLYWLVR 134          
BLAST of mRNA_E-siliculosus-1a_F_contig1362.2166.1 vs. uniprot
Match: A0A7S0CDW0_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CDW0_9STRA)

HSP 1 Score: 109 bits (272), Expect = 7.010e-28
Identity = 61/121 (50.41%), Postives = 77/121 (63.64%), Query Frame = 0
Query:   15 FGSQGRGGSNTGGGYYSAPTDRIR--ETNHNIMEMQNNAHIDDLSDQVSRLKHLTIDIGQEVRSQNDLISGMEGQMFDARGLLGGTLRRINTMMAQGGSRHMCYLVAFIVFTFMAIWYILK 133
            +G   RGG    GGY      R+   ETN NI+E QNN  I +LSDQV+RLK LTIDIG EVR QN L+  M       R LL G+LRRI  M+ QGGS+HMCY+V+FIVF    +++++ 
Sbjct:   20 YGGSTRGGR---GGYDPERGGRMSATETNQNILEQQNNDRISELSDQVARLKGLTIDIGNEVREQNSLLDDMGDGFNSTRDLLAGSLRRIGNMLEQGGSKHMCYMVSFIVFVMFFLYWVMS 137          
BLAST of mRNA_E-siliculosus-1a_F_contig1362.2166.1 vs. uniprot
Match: A0A7S2UA83_9STRA (Hypothetical protein n=2 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UA83_9STRA)

HSP 1 Score: 110 bits (275), Expect = 8.380e-28
Identity = 63/132 (47.73%), Postives = 86/132 (65.15%), Query Frame = 0
Query:   16 GSQGRGGSNTGGGYYSA--PTD-----RIRETNHNIMEMQNNAHIDDLSDQVSRLKHLTIDIGQEVRSQNDLISGMEGQMFDARGLLGGTLRRINTMMAQGGSRHMCYLVAFIVFTFMAIWYIL--KQTRGG 138
            G++ RGG   GGGY +   P++        ETN NIME QNN  ID+LS+QV+RLK LTIDIG EV+ QN L+  M     + R LL G+LRRI TM+  GG++HMCY+V F+VF  + +++++  K T G 
Sbjct:   61 GNRSRGG---GGGYSNGYNPSNLESGMSASETNANIMEQQNNDRIDELSEQVARLKGLTIDIGNEVKEQNSLLDDMGDGFANTRDLLAGSLRRIGTMLESGGAKHMCYMVGFVVFVMVFLYWVMTHKGTNGA 189          
BLAST of mRNA_E-siliculosus-1a_F_contig1362.2166.1 vs. uniprot
Match: A0A6T5SWN9_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A6T5SWN9_9STRA)

HSP 1 Score: 105 bits (263), Expect = 1.080e-26
Identity = 61/136 (44.85%), Postives = 87/136 (63.97%), Query Frame = 0
Query:    1 MRRRP-ENGEEMHNAF--GSQGRGGSNTGGGYYSAPTDRIRETNHNIMEMQNNAHIDDLSDQVSRLKHLTIDIGQEVRSQNDLISGMEGQMFDARGLLGGTLRRINTMMAQGGSRHMCYLVAFIVFTFMAIWYILK 133
            MR+RP  + ++M+N    G  GRGG   G G  S       E N NIME QNN  I +LSDQV+RLK LT+DIG EV  QN+L+ GM     +   +L G+L R+  M+ +GG++HMCYLVAF+VF  + ++++++
Sbjct:    1 MRQRPPRSNDDMYNNLESGRGGRGGXXXGNGMSS------HEANANIMESQNNDRISELSDQVARLKGLTLDIGNEVSEQNNLLDGMGDSFGNVGDMLTGSLARMGIMLERGGAKHMCYLVAFVVFVMVFLYWLVR 130          
BLAST of mRNA_E-siliculosus-1a_F_contig1362.2166.1 vs. uniprot
Match: A0A7S2G7S7_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G7S7_9STRA)

HSP 1 Score: 104 bits (260), Expect = 2.750e-26
Identity = 49/108 (45.37%), Postives = 75/108 (69.44%), Query Frame = 0
Query:   27 GGYYSAPTDRIRETNHNIMEMQNNAHIDDLSDQVSRLKHLTIDIGQEVRSQNDLISGMEGQMFDARGLLGGTLRRINTMMAQGGSRHMCYLVAFIVFTFMAIWYILKQ 134
            G  + + +DR+ ETN  ++E QN++ I+ L+DQ+ RLK L+IDI +EV  QN ++ GM  QM  A GLL  TL ++ TM+  GGS+HM YL+ F+VF+F+ I++I+  
Sbjct:   14 GNRWGSASDRVAETNRRLLEQQNDSSINTLADQLGRLKELSIDINEEVADQNRMLDGMGNQMNSASGLLNETLGKLGTMLKSGGSKHMVYLIGFVVFSFIMIYWIMTH 121          
BLAST of mRNA_E-siliculosus-1a_F_contig1362.2166.1 vs. uniprot
Match: A0A7S2S2C5_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S2C5_9STRA)

HSP 1 Score: 104 bits (260), Expect = 2.910e-26
Identity = 53/112 (47.32%), Postives = 69/112 (61.61%), Query Frame = 0
Query:   26 GGGYYSAPTDRIRETNHNIMEMQNNAHIDDLSDQVSRLKHLTIDIGQEVRSQNDLISGMEGQMFDARGLLGGTLRRINTMMAQGGSRHMCYLVAFIVFTFMAIWYILKQTRG 137
            G G + +   R+ +TN  +ME QNN  I  L DQVSRLK LTIDI  EV  QN L+  M G+M  A  LL  TL ++  M+  GGS HM YL+ FIVF+F+ I++I+   R 
Sbjct:   14 GSGLFGSADQRVADTNRRLMEQQNNGKISALEDQVSRLKELTIDINAEVEEQNRLLGDMGGEMSSASDLLQQTLGKLGVMLNSGGSSHMVYLIGFIVFSFLVIYFIMTHKRA 125          
BLAST of mRNA_E-siliculosus-1a_F_contig1362.2166.1 vs. uniprot
Match: A0A7S2NWZ0_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2NWZ0_9STRA)

HSP 1 Score: 100 bits (250), Expect = 1.090e-24
Identity = 50/96 (52.08%), Postives = 67/96 (69.79%), Query Frame = 0
Query:   39 ETNHNIMEMQNNAHIDDLSDQVSRLKHLTIDIGQEVRSQNDLISGMEGQMFDARGLLGGTLRRINTMMAQGGSRHMCYLVAFIVFTFMAIWYILKQ 134
            ETN NIME QNN  I DLS+QV+RLK LTIDIG EVR QN L+  M     +   LL GT+RRI T++ +GG++HM YLV F+V   + +++++K 
Sbjct:   36 ETNSNIMEQQNNERIADLSEQVARLKGLTIDIGNEVREQNSLLDNMGDNFGNVGDLLNGTMRRIGTLLDRGGAKHMFYLVGFVVAVMVFLYWVMKH 131          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1362.2166.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FPR8_ECTSI8.310e-8798.45Soluble NSF Attachment Protein (SNAP) Receptor (SN... [more]
A0A835YRV7_9STRA7.790e-3860.00Soluble NSF attachment protein receptor n=1 Tax=Tr... [more]
A0A4D9D9V6_9STRA5.090e-3146.21t-SNARE coiled-coil homology domain-containing pro... [more]
B8C544_THAPS4.610e-2950.00t-SNARE coiled-coil homology domain-containing pro... [more]
A0A7S0CDW0_9STRA7.010e-2850.41Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
A0A7S2UA83_9STRA8.380e-2847.73Hypothetical protein n=2 Tax=Attheya septentrional... [more]
A0A6T5SWN9_9STRA1.080e-2644.85Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
A0A7S2G7S7_9STRA2.750e-2645.37Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S2S2C5_9STRA2.910e-2647.32Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2NWZ0_9STRA1.090e-2452.08Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000727Target SNARE coiled-coil homology domainSMARTSM00397tSNARE_6coord: 38..105
e-value: 0.0022
score: 27.3
IPR000727Target SNARE coiled-coil homology domainPROSITEPS50192T_SNAREcoord: 43..105
score: 12.338
NoneNo IPR availableGENE3D1.20.5.110coord: 45..106
e-value: 2.2E-11
score: 45.5
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..113
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 133..139
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 114..132
NoneNo IPR availableSUPERFAMILY58038SNARE fusion complexcoord: 39..105
NoneNo IPR availableTMHMMTMhelixcoord: 110..132
IPR039897BET1-like proteinPANTHERPTHR12791GOLGI SNARE BET1-RELATEDcoord: 31..133

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1362contigE-siliculosus-1a_F_contig1362:29088..31131 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1362.2166.1mRNA_E-siliculosus-1a_F_contig1362.2166.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1362 28530..31261 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1362.2166.1 ID=prot_E-siliculosus-1a_F_contig1362.2166.1|Name=mRNA_E-siliculosus-1a_F_contig1362.2166.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=140bp
MRRRPENGEEMHNAFGSQGRGGSNTGGGYYSAPTDRIRETNHNIMEMQNN
AHIDDLSDQVSRLKHLTIDIGQEVRSQNDLISGMEGQMFDARGLLGGTLR
RINTMMAQGGSRHMCYLVAFIVFTFMAIWYILKQTRGGR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039897BET1
IPR000727T_SNARE_dom