prot_E-siliculosus-1a_F_contig1361.2160.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1361.2160.1
Unique Nameprot_E-siliculosus-1a_F_contig1361.2160.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length718
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig1361.2160.1 vs. uniprot
Match: A0A6H5JPW3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPW3_9PHAE)

HSP 1 Score: 176 bits (445), Expect = 8.700e-48
Identity = 87/90 (96.67%), Postives = 89/90 (98.89%), Query Frame = 0 
Query:    1 MRRQELEELFAVWQAKLLHPLDRSRWTHVLNTTVASLLSAQPLQCLTKSGRLAVVMCIVGSGRAGLFSPAVLAVLACDWVDDYGSFKLLQ 90
            MRRQELEELF VWQAKLLHPLDRSRWT+VLNTTVASLLSAQPLQCLTKSGRLAV+MCIVGSGRAGLFSPAVLAVLACDWVDDYGSFKLLQ
Sbjct:   72 MRRQELEELFTVWQAKLLHPLDRSRWTNVLNTTVASLLSAQPLQCLTKSGRLAVMMCIVGSGRAGLFSPAVLAVLACDWVDDYGSFKLLQ 161
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1361.2160.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JPW3_9PHAE8.700e-4896.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.30.30.140coord: 289..350
e-value: 9.8E-7
score: 30.4

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1361contigE-siliculosus-1a_F_contig1361:14878..19620 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1361.2160.1mRNA_E-siliculosus-1a_F_contig1361.2160.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1361 14637..19620 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1361.2160.1 ID=prot_E-siliculosus-1a_F_contig1361.2160.1|Name=mRNA_E-siliculosus-1a_F_contig1361.2160.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=718bp
MRRQELEELFAVWQAKLLHPLDRSRWTHVLNTTVASLLSAQPLQCLTKSG
RLAVVMCIVGSGRAGLFSPAVLAVLACDWVDDYGSFKLLQNTARQASLSR
LRSECISGKPPHQWSQEHIADFLEEGLQSTISGPWRALGIKGSARESVDK
TSREIRGLAARCREACDRSAARKLLCCYLDSNRLEDFIDSLVSWGQEQLG
ASKPSIFEEAFPFLEGRQIEASRSRADQMVQAGVQVSKETSESRNAQHPS
SPNSPAMCFPSDAEEDDQESAERQHEGRSSRKRRRLGILHLDESVCVKRK
GIPGPAGKLWRPAVITKCRGDGTYDVAYEDGEADHLVRRADIFEAEGNAA
PTEVPEPQEADHSHLQGGRSPSQAAVGDTSRLPPSSKASSVSEEEEFWSV
TDVDDDFDASRQGRTSGSHLIKRRNNKRRILEDDDDECEEPPSAEGIENM
TSVGALESQSSRFPHAAEKKRTSPFCTDQENPKGAADTRQATQQEEERGQ
KQWDREDLLLRDSCTHRKAEPASPFTPRHEQGGGAEGEDEDEVETDEELT
EKCEEARTEKHENTGKVLEKRGQGGGDGIEQQSEEPVGDGVANRMQPLAE
HSSEARQNAPNGEKLGNERCTNGMTLLAEGDRASASGALTASFQHDKEIS
HSQEPNDTSPRDEQTPNALVDHDVVGSPVGKIPDPTSLMRAYGSAGLTRV
RKSFGQWFSQRRSTCES*
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