prot_E-siliculosus-1a_F_contig1360.2154.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1360.2154.1
Unique Nameprot_E-siliculosus-1a_F_contig1360.2154.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length239
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1360.2154.1 vs. uniprot
Match: D8LCW9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCW9_ECTSI)

HSP 1 Score: 402 bits (1032), Expect = 1.980e-140
Identity = 225/238 (94.54%), Postives = 229/238 (96.22%), Query Frame = 0
Query:    1 MGEWEDPFNIIGFVGGVVLATALLPQIYLAHSRKSTADISYLWQAVYTVGLLTLMIYYFHFRLWAVFYPMAFEFSSLMYLTGLKIYYEVCLGNVSPPEELPSLLEASRSGPXXXXXXXXGRIGRMPSKLSLDAIDXXXXXXXXXXXLFKSSFRDASSNGVVCPQGQPSVVGTTSVDLPRPPVMGRTRSRPHSPDAVSGGGTEVGSGAVPRHEQRADEAKEAQASAVVADDSIHVLPSE 238
            MGEWEDPFNIIGFVGGVVLATALLPQIYLAHSRKSTADISYLWQAVYTVGLLTLMIYYFHFRLWAVFYPMAFEFSSLMYLTGLKIYYEVCLGNV+PPEELPSLLEA+RSGPXXXXXXXXGRIGRMPSKLSLDAIDXXXXXXXXXXX    S RDASSNGVVCPQGQPSV GTTS+DLPRPPVMGRTRSRPHSPDAVSG GTEVG GA+PRHEQRADEAKEAQASAV ADDSIHVLPSE
Sbjct:    1 MGEWEDPFNIIGFVGGVVLATALLPQIYLAHSRKSTADISYLWQAVYTVGLLTLMIYYFHFRLWAVFYPMAFEFSSLMYLTGLKIYYEVCLGNVAPPEELPSLLEANRSGPXXXXXXXXGRIGRMPSKLSLDAIDXXXXXXXXXXXXXXXSLRDASSNGVVCPQGQPSVSGTTSLDLPRPPVMGRTRSRPHSPDAVSGAGTEVGGGAIPRHEQRADEAKEAQASAVAADDSIHVLPSE 238          
BLAST of mRNA_E-siliculosus-1a_F_contig1360.2154.1 vs. uniprot
Match: A0A6H5K0Z2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0Z2_9PHAE)

HSP 1 Score: 114 bits (286), Expect = 1.360e-28
Identity = 52/84 (61.90%), Postives = 65/84 (77.38%), Query Frame = 0
Query:    5 EDPFNIIGFVGGVVLATALLPQIYLAHSRKSTADISYLWQAVYTVGLLTLMIYYFHFRLWAVFYPMAFEFSSLMYLTGLKIYYE 88
            +  FN +G  GG++LA AL+PQI LAH R+S  DISY+WQA+Y  GL TLMIYY HF LWAVF+P+A E S L+YLT LK+Y+E
Sbjct:    9 DQIFNAVGTTGGIILACALVPQIVLAHKRRSAEDISYMWQAIYVTGLATLMIYYVHFGLWAVFFPVAVECSCLIYLTALKMYFE 92          
BLAST of mRNA_E-siliculosus-1a_F_contig1360.2154.1 vs. uniprot
Match: A0A6H5JYM3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYM3_9PHAE)

HSP 1 Score: 75.5 bits (184), Expect = 1.550e-14
Identity = 39/56 (69.64%), Postives = 41/56 (73.21%), Query Frame = 0
Query:  125 MPSKLSLDAIDXXXXXXXXXXXLFKSSFRDASSNGVVCPQGQPSVVGTTSVDLPRP 180
            MPSKLSLDAID           L KSSFRDAS+N VVCPQGQPSVVGT S+DLP P
Sbjct:    1 MPSKLSLDAIDDASKSGRRRTMLSKSSFRDASNNSVVCPQGQPSVVGTASLDLPAP 56          
BLAST of mRNA_E-siliculosus-1a_F_contig1360.2154.1 vs. uniprot
Match: D7G1V2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1V2_ECTSI)

HSP 1 Score: 72.8 bits (177), Expect = 9.140e-13
Identity = 31/86 (36.05%), Postives = 54/86 (62.79%), Query Frame = 0
Query:    5 EDPFNIIGFVGGVVLATALLPQIYLAHSRKSTADISYLWQAVYTVGLLTLMIYYFHFRLWAVFYPMAFEFSSLMYLTGLKIYYEVC 90
            +  ++++GF+GG V+A +L+PQ+Y    RK  ADIS+ +Q V+  G++  +++Y ++ LW +F+P        +YL  LKI  E C
Sbjct:    3 DTVYDVMGFLGGCVMAASLVPQVYRVTVRKKAADISHTYQVVFVTGIVMFLVFYGYYELWELFFPALASMMLQIYLAVLKIRLERC 88          
BLAST of mRNA_E-siliculosus-1a_F_contig1360.2154.1 vs. uniprot
Match: G5AIC2_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G5AIC2_PHYSP)

HSP 1 Score: 68.6 bits (166), Expect = 3.550e-11
Identity = 35/88 (39.77%), Postives = 53/88 (60.23%), Query Frame = 0
Query:    1 MGEWEDPFNIIGFVGGVVLATALLPQIYLAHSRKSTADISYLWQAVYTVGLLTLMIYYFHFRLWAVFYPMAFEFSSLMYLTGLKIYYE 88
            MGE    F I+GF+G ++LA +L+PQ+   +  KS  DISY +Q  Y VGL  ++ Y F   LW V+ P   E S+ + +  +K+YY+
Sbjct:    1 MGE---AFQIVGFLGSLLLAASLVPQMMKLYKTKSAKDISYSYQISYVVGLAMIVAYGFGRWLWPVYIPATIELSAALVVFSMKLYYD 85          
BLAST of mRNA_E-siliculosus-1a_F_contig1360.2154.1 vs. uniprot
Match: A0A3R7YUP5_9STRA (Uncharacterized protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3R7YUP5_9STRA)

HSP 1 Score: 64.3 bits (155), Expect = 5.060e-10
Identity = 28/83 (33.73%), Postives = 51/83 (61.45%), Query Frame = 0
Query:    5 EDPFNIIGFVGGVVLATALLPQIYLAHSRKSTADISYLWQAVYTVGLLTLMIYYFHFRLWAVFYPMAFEFSSLMYLTGLKIYY 87
             + F I+GF+G ++L  +++PQ+   ++ KS  DIS  +Q  Y +GL  +++Y F   LW V+ P+ FE  + + +  +K+YY
Sbjct:    2 SEAFQILGFLGSLLLGLSMVPQMIKLYTTKSAKDISLTYQISYVLGLSLIVVYGFGRWLWPVYIPVTFELCAALVVLSMKLYY 84          
BLAST of mRNA_E-siliculosus-1a_F_contig1360.2154.1 vs. uniprot
Match: A0A6A3DP10_9STRA (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A3DP10_9STRA)

HSP 1 Score: 65.1 bits (157), Expect = 7.440e-10
Identity = 33/88 (37.50%), Postives = 52/88 (59.09%), Query Frame = 0
Query:    1 MGEWEDPFNIIGFVGGVVLATALLPQIYLAHSRKSTADISYLWQAVYTVGLLTLMIYYFHFRLWAVFYPMAFEFSSLMYLTGLKIYYE 88
            MGE    F I+GF+G ++LA +L+PQ+   +  KS  DIS  +Q  Y +GL  +++Y F   LW V+ P   E  + + +  +KIYY+
Sbjct:    1 MGE---AFQILGFLGSLLLAASLVPQMMKIYKTKSAKDISLSYQIAYVLGLAMIVVYGFGRWLWPVYIPTTIELCAALVVFSMKIYYD 85          
BLAST of mRNA_E-siliculosus-1a_F_contig1360.2154.1 vs. uniprot
Match: A0A7S1Y593_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1Y593_9STRA)

HSP 1 Score: 67.4 bits (163), Expect = 1.440e-9
Identity = 38/89 (42.70%), Postives = 49/89 (55.06%), Query Frame = 0
Query:    2 GEWEDPFNIIGFVGGVVLATALLPQIYLAHSRKSTADISYLWQAVYTVGLLTLMIYYFHFRLWAVFYPMAFEFSSLMYLTGLKIYYEVC 90
            G   D   IIG+VGGVVLA AL+PQ+  +   KSTADISY WQ +Y VGL     Y+      A +  + FE      L  LK+ ++ C
Sbjct:    6 GYEVDYIEIIGYVGGVVLAVALVPQVIKSWKEKSTADISYSWQVIYIVGLWLNFAYFILVDAVAAWVTLLFEIVCAHLLVLLKLRFDGC 94          
BLAST of mRNA_E-siliculosus-1a_F_contig1360.2154.1 vs. uniprot
Match: D0N1M1_PHYIT (Uncharacterized protein n=11 Tax=Phytophthora TaxID=4783 RepID=D0N1M1_PHYIT)

HSP 1 Score: 62.4 bits (150), Expect = 4.450e-9
Identity = 32/88 (36.36%), Postives = 51/88 (57.95%), Query Frame = 0
Query:    1 MGEWEDPFNIIGFVGGVVLATALLPQIYLAHSRKSTADISYLWQAVYTVGLLTLMIYYFHFRLWAVFYPMAFEFSSLMYLTGLKIYYE 88
            MGE    F I+GF+G ++LA +L+PQ    +  KS  DIS  +Q  Y +GL  +++Y F   LW V+ P   E  + + +  +K+YY+
Sbjct:    1 MGE---AFQILGFLGSLLLAASLVPQAMKLYKTKSAKDISLSYQISYVLGLAMIVVYGFGRWLWPVYIPATIELCAAIIVFSMKLYYD 85          
BLAST of mRNA_E-siliculosus-1a_F_contig1360.2154.1 vs. uniprot
Match: A0A815P5U6_9BILA (Hypothetical protein n=1 Tax=Didymodactylos carnosus TaxID=1234261 RepID=A0A815P5U6_9BILA)

HSP 1 Score: 60.5 bits (145), Expect = 3.480e-8
Identity = 27/88 (30.68%), Postives = 50/88 (56.82%), Query Frame = 0
Query:    1 MGEWEDPFNIIGFVGGVVLATALLPQIYLAHSRKSTADISYLWQAVYTVGLLTLMIYYFHFRLWAVFYPMAFEFSSLMYLTGLKIYYE 88
            M +WE   +++G++GG +LA  LLPQ+Y  +  +S  D SY+W  +Y  G++  ++Y    +  A +  +  EF+  + L  +K Y +
Sbjct:    1 MKKWE--IDLLGYLGGALLAICLLPQLYRTYKTRSAGDFSYIWNVLYMAGMIITIVYLIEVKALAGWISLVCEFAMALALFIMKAYLQ 86          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1360.2154.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 15
Match NameE-valueIdentityDescription
D8LCW9_ECTSI1.980e-14094.54Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K0Z2_9PHAE1.360e-2861.90Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JYM3_9PHAE1.550e-1469.64Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G1V2_ECTSI9.140e-1336.05Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
G5AIC2_PHYSP3.550e-1139.77Uncharacterized protein n=1 Tax=Phytophthora sojae... [more]
A0A3R7YUP5_9STRA5.060e-1033.73Uncharacterized protein n=1 Tax=Peronospora effusa... [more]
A0A6A3DP10_9STRA7.440e-1037.50Uncharacterized protein n=4 Tax=Phytophthora TaxID... [more]
A0A7S1Y593_9STRA1.440e-942.70Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
D0N1M1_PHYIT4.450e-936.36Uncharacterized protein n=11 Tax=Phytophthora TaxI... [more]
A0A815P5U6_9BILA3.480e-830.68Hypothetical protein n=1 Tax=Didymodactylos carnos... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.20.1280.290coord: 6..89
e-value: 7.4E-10
score: 40.8
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 30..40
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..6
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 41..59
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 66..87
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 60..65
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 7..29
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 88..238
NoneNo IPR availableTMHMMTMhelixcoord: 39..61
NoneNo IPR availableTMHMMTMhelixcoord: 10..32
IPR006603PQ-loop repeatPFAMPF04193PQ-loopcoord: 9..62
e-value: 7.2E-8
score: 32.1

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1360contigE-siliculosus-1a_F_contig1360:18713..21199 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1360.2154.1mRNA_E-siliculosus-1a_F_contig1360.2154.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1360 14471..23132 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1360.2154.1 ID=prot_E-siliculosus-1a_F_contig1360.2154.1|Name=mRNA_E-siliculosus-1a_F_contig1360.2154.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=239bp
MGEWEDPFNIIGFVGGVVLATALLPQIYLAHSRKSTADISYLWQAVYTVG
LLTLMIYYFHFRLWAVFYPMAFEFSSLMYLTGLKIYYEVCLGNVSPPEEL
PSLLEASRSGPSLFDASRSGRIGRMPSKLSLDAIDDASKSGRRSRMLFKS
SFRDASSNGVVCPQGQPSVVGTTSVDLPRPPVMGRTRSRPHSPDAVSGGG
TEVGSGAVPRHEQRADEAKEAQASAVVADDSIHVLPSE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006603PQ-loop_rpt