prot_E-siliculosus-1a_F_contig1360.2153.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1360.2153.1
Unique Nameprot_E-siliculosus-1a_F_contig1360.2153.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length145
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1360.2153.1 vs. uniprot
Match: A0A6H5K0Z2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0Z2_9PHAE)

HSP 1 Score: 271 bits (693), Expect = 8.600e-92
Identity = 136/144 (94.44%), Postives = 139/144 (96.53%), Query Frame = 0
Query:    1 MVPLEDQIFNAVGTTGGIILACALVPQIVLAHKRRSAEDISYMWQAIYITGLATLMIYYVHFGLWAVFFPVAVECSCLIYLTGLKMYFEKFASGGGPSEKLAPSSHVVGEGTGINSARGAGRSPQIGRYGAAGCASSPEITLRA 144
            MVPL+DQIFNAVGTTGGIILACALVPQIVLAHKRRSAEDISYMWQAIY+TGLATLMIYYVHFGLWAVFFPVAVECSCLIYLT LKMYFEKFASG G SEKL PSSHVVGEGTGINSAR AGRSPQIGRYGAAGCASSPEI+LRA
Sbjct:    4 MVPLDDQIFNAVGTTGGIILACALVPQIVLAHKRRSAEDISYMWQAIYVTGLATLMIYYVHFGLWAVFFPVAVECSCLIYLTALKMYFEKFASGDGISEKLTPSSHVVGEGTGINSARDAGRSPQIGRYGAAGCASSPEISLRA 147          
BLAST of mRNA_E-siliculosus-1a_F_contig1360.2153.1 vs. uniprot
Match: D8LCW9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCW9_ECTSI)

HSP 1 Score: 120 bits (302), Expect = 3.070e-31
Identity = 58/97 (59.79%), Postives = 71/97 (73.20%), Query Frame = 0
Query:    5 EDQIFNAVGTTGGIILACALVPQIVLAHKRRSAEDISYMWQAIYITGLATLMIYYVHFGLWAVFFPVAVECSCLIYLTGLKMYFEKFASGGGPSEKL 101
            ED  FN +G  GG++LA AL+PQI LAH R+S  DISY+WQA+Y  GL TLMIYY HF LWAVF+P+A E S L+YLTGLK+Y+E       P E+L
Sbjct:    5 EDP-FNIIGFVGGVVLATALLPQIYLAHSRKSTADISYLWQAVYTVGLLTLMIYYFHFRLWAVFYPMAFEFSSLMYLTGLKIYYEVCLGNVAPPEEL 100          
BLAST of mRNA_E-siliculosus-1a_F_contig1360.2153.1 vs. uniprot
Match: A0A0L0S376_ALLM3 (Uncharacterized protein n=2 Tax=Allomyces macrogynus (strain ATCC 38327) TaxID=578462 RepID=A0A0L0S376_ALLM3)

HSP 1 Score: 70.9 bits (172), Expect = 5.160e-13
Identity = 35/90 (38.89%), Postives = 51/90 (56.67%), Query Frame = 0
Query:    1 MVPLEDQIFNAVGTTGGIILACALVPQIVLAHKRRSAEDISYMWQAIYITGLATLMIYYVHFGLWAVFFPVAVECSCLIYLTGLKMYFEK 90
            M  L      A+G  GG++LA  L PQI+   + RSAEDISY WQ +Y+ GL+  + Y V  G  A +  V +E + L+ L   K +F++
Sbjct:    1 MTNLSTPEVEAIGYVGGVVLALCLAPQIIQVVRTRSAEDISYAWQGLYLVGLSINLAYLVLLGAVAGYVAVIIEIALLLVLVVCKFFFDR 90          
BLAST of mRNA_E-siliculosus-1a_F_contig1360.2153.1 vs. uniprot
Match: A0A8K1C8K9_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C8K9_PYTOL)

HSP 1 Score: 70.5 bits (171), Expect = 6.600e-13
Identity = 31/82 (37.80%), Postives = 52/82 (63.41%), Query Frame = 0
Query:    9 FNAVGTTGGIILACALVPQIVLAHKRRSAEDISYMWQAIYITGLATLMIYYVHFGLWAVFFPVAVECSCLIYLTGLKMYFEK 90
            F+ +G  G  +++ ALVPQI   ++ +SA DISY +  +Y+TGL  ++IY +   LW ++ P A+E    I L G+K +F++
Sbjct:    7 FDILGLVGSFLISAALVPQIQKVYRTKSANDISYSFMCLYVTGLTMIVIYGIGEALWPIYIPCALELLGAISLLGMKCHFDR 88          
BLAST of mRNA_E-siliculosus-1a_F_contig1360.2153.1 vs. uniprot
Match: A0A1E7FTB5_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FTB5_9STRA)

HSP 1 Score: 66.2 bits (160), Expect = 3.390e-11
Identity = 30/81 (37.04%), Postives = 49/81 (60.49%), Query Frame = 0
Query:   10 NAVGTTGGIILACALVPQIVLAHKRRSAEDISYMWQAIYITGLATLMIYYVHFGLWAVFFPVAVECSCLIYLTGLKMYFEK 90
            + +G  GG  ++ +L+PQ+      +SA DISY +QAIYI G    +IY     LW V+ P+ +E + +I LT +K+ F++
Sbjct:    7 DIIGFVGGTTISLSLIPQVYKTFHSKSAGDISYYYQAIYIVGCTLTLIYAAALRLWPVYIPITLELTLIISLTVMKVIFDR 87          
BLAST of mRNA_E-siliculosus-1a_F_contig1360.2153.1 vs. uniprot
Match: A0A7S1Y593_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1Y593_9STRA)

HSP 1 Score: 62.4 bits (150), Expect = 1.050e-8
Identity = 32/85 (37.65%), Postives = 45/85 (52.94%), Query Frame = 0
Query:    5 EDQIFNAVGTTGGIILACALVPQIVLAHKRRSAEDISYMWQAIYITGLATLMIYYVHFGLWAVFFPVAVECSCLIYLTGLKMYFE 89
            E      +G  GG++LA ALVPQ++ + K +S  DISY WQ IYI GL     Y++     A +  +  E  C   L  LK+ F+
Sbjct:    8 EVDYIEIIGYVGGVVLAVALVPQVIKSWKEKSTADISYSWQVIYIVGLWLNFAYFILVDAVAAWVTLLFEIVCAHLLVLLKLRFD 92          
BLAST of mRNA_E-siliculosus-1a_F_contig1360.2153.1 vs. uniprot
Match: A0A2D6SQC4_9ARCH (Uncharacterized protein n=1 Tax=Candidatus Woesearchaeota archaeon TaxID=2026803 RepID=A0A2D6SQC4_9ARCH)

HSP 1 Score: 57.4 bits (137), Expect = 3.280e-8
Identity = 27/81 (33.33%), Postives = 49/81 (60.49%), Query Frame = 0
Query:    9 FNAVGTTGGIILACALVPQIVLAHKRRSAEDISYMWQAIYITGLATLMIYYVHFGLWAVFFPVAVECSCLIYLTGLKMYFE 89
            F  VG T G+++A AL+PQ++ + K +S +DIS +W +I +TGLA  ++Y +   +W +     +E    + L  LK+ ++
Sbjct:    4 FELVGYTAGLLVAVALIPQLIKSWKTKSTKDISIIWTSILMTGLALWIVYGIGNLIWPIIVFATIEFLMTLSLFVLKLMYK 84          
BLAST of mRNA_E-siliculosus-1a_F_contig1360.2153.1 vs. uniprot
Match: A0A7J7PZ05_9CHLO (Uncharacterized protein n=1 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7PZ05_9CHLO)

HSP 1 Score: 60.1 bits (144), Expect = 5.440e-8
Identity = 32/91 (35.16%), Postives = 47/91 (51.65%), Query Frame = 0
Query:    4 LEDQIFNAVGTTGGIILACALVPQIVLAHKRRSAEDISYMWQAIYITGLATLMIYYVHFGLWAVFFPVAVECSCLIYLTGLKMYFEKFASG 94
            L     +A+G TGG +LA  L+PQI      RSA DISY W  +Y+ G    ++Y V     A + P+ +E +  + +  LK  FE   +G
Sbjct:   12 LSPAAMDAIGYTGGCVLAICLIPQIGKIVITRSARDISYAWSVLYLIGTCLSLVYLVLKDAMAAWIPLVIEIAGCLCVICLKTLFEHTRAG 102          
BLAST of mRNA_E-siliculosus-1a_F_contig1360.2153.1 vs. uniprot
Match: A0A383VKW1_TETOB (Uncharacterized protein n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383VKW1_TETOB)

HSP 1 Score: 60.1 bits (144), Expect = 5.520e-8
Identity = 33/91 (36.26%), Postives = 47/91 (51.65%), Query Frame = 0
Query:    4 LEDQIFNAVGTTGGIILACALVPQIVLAHKRRSAEDISYMWQAIYITGLATLMIYYVHFGLWAVFFPVAVECSCLIYLTGLKMYFEKFASG 94
            L     +A+G TGG +LA  L+PQI      RSA DISY W  +Y+ G+   + Y +     A + P+ +E +  I +  LK  FE  A G
Sbjct:   14 LSPAAMDAIGYTGGGVLAVCLIPQIGKIILTRSARDISYAWSVMYMIGMTLSLAYLIMKDAMAAWIPLVIEIAGCIAIILLKTLFEHTARG 104          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1360.2153.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
A0A6H5K0Z2_9PHAE8.600e-9294.44Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LCW9_ECTSI3.070e-3159.79Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A0L0S376_ALLM35.160e-1338.89Uncharacterized protein n=2 Tax=Allomyces macrogyn... [more]
A0A8K1C8K9_PYTOL6.600e-1337.80Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A1E7FTB5_9STRA3.390e-1137.04Uncharacterized protein n=1 Tax=Fragilariopsis cyl... [more]
A0A7S1Y593_9STRA1.050e-837.65Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
A0A2D6SQC4_9ARCH3.280e-833.33Uncharacterized protein n=1 Tax=Candidatus Woesear... [more]
A0A7J7PZ05_9CHLO5.440e-835.16Uncharacterized protein n=1 Tax=Scenedesmus sp. NR... [more]
A0A383VKW1_TETOB5.520e-836.26Uncharacterized protein n=1 Tax=Tetradesmus obliqu... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006603PQ-loop repeatPFAMPF04193PQ-loopcoord: 9..63
e-value: 2.8E-8
score: 33.4
NoneNo IPR availableGENE3D1.20.1280.290coord: 4..92
e-value: 2.9E-10
score: 42.1
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 67..88
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 31..41
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..30
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 89..144
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 62..66
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 42..61
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..11
NoneNo IPR availableTMHMMTMhelixcoord: 46..68
NoneNo IPR availableTMHMMTMhelixcoord: 9..31

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1360contigE-siliculosus-1a_F_contig1360:9402..14200 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1360.2153.1mRNA_E-siliculosus-1a_F_contig1360.2153.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1360 8452..14324 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1360.2153.1 ID=prot_E-siliculosus-1a_F_contig1360.2153.1|Name=mRNA_E-siliculosus-1a_F_contig1360.2153.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=145bp
MVPLEDQIFNAVGTTGGIILACALVPQIVLAHKRRSAEDISYMWQAIYIT
GLATLMIYYVHFGLWAVFFPVAVECSCLIYLTGLKMYFEKFASGGGPSEK
LAPSSHVVGEGTGINSARGAGRSPQIGRYGAAGCASSPEITLRA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006603PQ-loop_rpt