prot_E-siliculosus-1a_F_contig1359.2137.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1359.2137.1
Unique Nameprot_E-siliculosus-1a_F_contig1359.2137.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length207
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1359.2137.1 vs. uniprot
Match: A0A6H5K275_9PHAE (Thioredoxin domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K275_9PHAE)

HSP 1 Score: 295 bits (754), Expect = 3.560e-99
Identity = 194/206 (94.17%), Postives = 198/206 (96.12%), Query Frame = 0
Query:    1 MKSAFAMIGALCCGASSAGAFVLPLGRPTGSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPAARPTAAQEPERRPNVQQAIDSNDDYVSAMAQHQDKLVVIKFYDQFCRACDEIRPRYEDLSRSQPEEDAVFFDVEFSGAKDLCKQLGIMRLPTVQIYDGTNGRVADLPAGPSRFTDVEEKFAAVISSKKSSGQAAVEFVAE 206
            MKSAFAMIGALCCGASSAGAF+LP+GRP+GS XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  AARPTAAQEPERRPNVQ AIDSNDDYVSAMAQH+DKLVVIKFYDQFCRACDEIRPRYEDLSRSQPEEDAVFFDVEFSGAKDLCKQLGIMRLPTVQIYDGTNGRVADLPAGPSRFTDVEEK AAVISSKKSS Q AVE VAE
Sbjct:    1 MKSAFAMIGALCCGASSAGAFILPVGRPSGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--AARPTAAQEPERRPNVQ-AIDSNDDYVSAMAQHEDKLVVIKFYDQFCRACDEIRPRYEDLSRSQPEEDAVFFDVEFSGAKDLCKQLGIMRLPTVQIYDGTNGRVADLPAGPSRFTDVEEKIAAVISSKKSSRQDAVEAVAE 203          
BLAST of mRNA_E-siliculosus-1a_F_contig1359.2137.1 vs. uniprot
Match: A0A835YVS6_9STRA (Thioredoxin-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVS6_9STRA)

HSP 1 Score: 102 bits (254), Expect = 3.050e-24
Identity = 51/110 (46.36%), Postives = 71/110 (64.55%), Query Frame = 0
Query:   91 YVSAMAQHQDKLVVIKFYDQFCRACDEIRPRYEDLSRSQPEEDAVFFDVEFSGAKDLCKQLGIMRLPTVQIYDGTNGRVADLPAGPSRFTDVEEKFAAVISSKKSSGQAA 200
            ++ AMA + DK VV+KFYD FCRAC  + P++E +++  P     F+ VEF   K LCK LGI  LPT+QIY G+ G++AD+P GP RF   E   A V++ + S+G  A
Sbjct:   30 FLEAMAANGDKPVVLKFYDTFCRACKAVAPKFERMAQENP--GVAFYQVEFRQDKPLCKSLGITMLPTIQIYQGSAGKIADMPVGPKRFHVAEATLAEVLN-QNSNGHGA 136          
BLAST of mRNA_E-siliculosus-1a_F_contig1359.2137.1 vs. uniprot
Match: A0A7S4A7N2_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A7N2_9STRA)

HSP 1 Score: 92.8 bits (229), Expect = 1.770e-19
Identity = 53/120 (44.17%), Postives = 75/120 (62.50%), Query Frame = 0
Query:   67 ARPTAAQEPERRPNVQQAIDSNDDYVSAMAQHQ-DKLVVIKFYDQFCRACDEIRPRYEDLSRSQPEEDAVFFDVEFSGAKDLCKQLGIMRLPTVQIYDGTNGRVADLPAGPSRFTDVEEK 185
            A+P A ++    P    AI   D +++AM++   DK+V IKFY  +CRAC  I PR+E L++   EE A F+++EFS  KDLC++L I +LP VQ + G  G VA +  GPS+F DV  K
Sbjct:  101 AKPLARKQSSHVP----AIVDEDTFLAAMSKSAGDKVVAIKFYAGWCRACKTIAPRFERLAKEFGEE-AAFYEIEFSANKDLCRRLDIKKLPCVQFFRGAEGHVATVMCGPSKFPDVRLK 215          
BLAST of mRNA_E-siliculosus-1a_F_contig1359.2137.1 vs. uniprot
Match: F0YB20_AURAN (Thioredoxin domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YB20_AURAN)

HSP 1 Score: 77.8 bits (190), Expect = 2.930e-15
Identity = 38/95 (40.00%), Postives = 62/95 (65.26%), Query Frame = 0
Query:   85 IDSNDDYVSAMAQ-HQDKLVVIKFYDQFCRACDEIRPRYEDLSRSQPEEDAVFFDVEFSGAKDLCKQLGIMRLPTVQIYDGTNGRVADLPAGPSR 178
            ID ++ +++AM     D+LV +KFY  +CRAC  I PR+E L++    ++  FF++EF+  K+LC++L I +LP VQ + G+ G V  +  GPS+
Sbjct:    4 IDGDEAFLAAMQYCTDDRLVAVKFYASWCRACKSIAPRFERLAKEFAGDEVQFFEIEFAANKELCRRLNIKKLPCVQYFRGSLGCVDTVMCGPSK 98          
BLAST of mRNA_E-siliculosus-1a_F_contig1359.2137.1 vs. uniprot
Match: K0SW29_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SW29_THAOC)

HSP 1 Score: 79.3 bits (194), Expect = 1.120e-13
Identity = 41/108 (37.96%), Postives = 62/108 (57.41%), Query Frame = 0
Query:   98 HQDKLVVIKFYDQFCRACDEIRPRYEDLSRSQPEEDA--VFFDVEFSGAKDLCKQLGIMRLPTVQIYDGTNGRVADLPAGPSRFTDVEEKFAAVISSKKSSGQAAVEF 203
            + DK++VIKF+  +CRAC  + P+Y  +SR     +   +F  +     K   K LGIM LP+VQIY G+ G V + P GPS+   ++ K   VI+SK   GQ +++ 
Sbjct:  106 NSDKIMVIKFFAPWCRACKSVEPKYVQISRDPKYANIPIIFGQLSVQNNKSYVKSLGIMALPSVQIYAGSEGLVENFPCGPSKIPLLKRKLTEVINSKVDPGQLSLKI 213          
BLAST of mRNA_E-siliculosus-1a_F_contig1359.2137.1 vs. uniprot
Match: A0A7S3VCG8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3VCG8_9STRA)

HSP 1 Score: 77.8 bits (190), Expect = 3.760e-13
Identity = 36/111 (32.43%), Postives = 69/111 (62.16%), Query Frame = 0
Query:   85 IDSNDDYVSAMAQHQDKLVVIKFYDQFCRACDEIRPRYEDLSRSQP--EEDAVFFDVEFSGAKDLCKQLGIMRLPTVQIYDGTNGRVADLPAGPSRFTDVEEKFAAVISSK 193
            ++S +++ + + Q+QDK++++KFY  +CRAC  + P++  +S+ +   +   VF  +  + AK+  K LG++ LP+V IY G  G +   P GPS+   +++K A V++ K
Sbjct:  119 LESKEEHQALLEQNQDKIILLKFYAPWCRACKGLEPKFIQISKDKKYAKLPLVFAQLSVANAKEYVKALGVLALPSVHIYGGEEGLLESFPCGPSKVPILKKKIAQVVNMK 229          
BLAST of mRNA_E-siliculosus-1a_F_contig1359.2137.1 vs. uniprot
Match: A0A7S2UII6_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UII6_9STRA)

HSP 1 Score: 71.2 bits (173), Expect = 2.900e-12
Identity = 40/107 (37.38%), Postives = 59/107 (55.14%), Query Frame = 0
Query:  100 DKLVVIKFYDQFCRACDEIRPRYEDLSRSQPEE----DAV-------FFDVEFSGAKDLCKQLGIMRLPTVQIYDGTNGRVADLPAGPSRFTDVEEKFAAVISSKKS 195
            D+L V+KF+  +C++C +   RY+ L+  + ++     AV       F +VEF+   DLCK LG+ +LP + IY G+ GRVAD   GP  F  V EK    +  K S
Sbjct:    3 DRLCVVKFHASWCKSCQKFGIRYKKLALQEGDKIDRRGAVLEKGRVRFAEVEFTANADLCKTLGVHKLPYIHIYSGSKGRVADFACGPKNFPLVIEKMNKFLDKKMS 109          
BLAST of mRNA_E-siliculosus-1a_F_contig1359.2137.1 vs. uniprot
Match: A0A7S3ATR9_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3ATR9_9EUKA)

HSP 1 Score: 71.2 bits (173), Expect = 7.110e-12
Identity = 37/103 (35.92%), Postives = 60/103 (58.25%), Query Frame = 0
Query:   85 IDSNDDYVSAM--AQHQDKLVVIKFYDQFCRACDEIRPRYEDLSRSQPEEDAVFFDVEFSGAKDLCKQLGIMRLPTVQIYDGTNGRVADLPAGPSRFTDVEEK 185
            ID  D Y + +  A  ++++VVIKF+  +CRAC  + P++  ++   P  D  F ++ F   K LCK LGI  LP ++I  G+ G+V     GPS+ + ++EK
Sbjct:   58 IDDTDAYEALIEEATRENRVVVIKFFASWCRACKAMSPKFTRIADDWP--DVEFHEIMFDNNKKLCKSLGIKILPYIEIIGGSGGKVEGFTCGPSKISRLQEK 158          
BLAST of mRNA_E-siliculosus-1a_F_contig1359.2137.1 vs. uniprot
Match: B8CB63_THAPS (Thioredoxin domain-containing protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CB63_THAPS)

HSP 1 Score: 66.2 bits (160), Expect = 5.740e-11
Identity = 34/82 (41.46%), Postives = 47/82 (57.32%), Query Frame = 0
Query:  100 DKLVVIKFYDQFCRACDEIRPRYEDLSRSQPEEDA--VFFDVEFSGAKDLCKQLGIMRLPTVQIYDGTNGRVADLPAGPSRF 179
            DKL+VIKFY  +CRAC  + P+Y  +S+         VF  +     K   K LGI+ LP++QIY G+ G V + P GPS+ 
Sbjct:    1 DKLMVIKFYAPWCRACKAVEPKYVQISKDPQYSSIPIVFGQLSVQHNKAYVKSLGILALPSMQIYAGSEGLVENFPCGPSKI 82          
BLAST of mRNA_E-siliculosus-1a_F_contig1359.2137.1 vs. uniprot
Match: A0A7S2A9P7_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A9P7_TRICV)

HSP 1 Score: 70.1 bits (170), Expect = 1.730e-10
Identity = 40/137 (29.20%), Postives = 74/137 (54.01%), Query Frame = 0
Query:   65 PAARPTAAQE------PERRPNVQQAIDSNDDYVSAMAQHQDKLVVIKFYDQFCRACDEIRPRYEDLSRSQPEEDAVFFDVEFS--GAKDLCKQLGIMRLPTVQIYDGTNGRVADLPAGPSRFTDVEEKFAAVISSK 193
            P+A  TA+ E      PE+  N    I + + + + +A H +++VV+KFY  +CRAC  + P++  + + +   +      + S    KD  K +G++ LP++  Y G+ G V + P GPS+    ++KFAA ++ +
Sbjct:  122 PSAEETASPEDTDVPMPEQDENGIYQILNGEQHGAFLAAHPNEVVVLKFYAPWCRACKGLEPKFIQIRKDEKYANLPILWAQMSVQNNKDYIKSIGVLALPSMHFYGGSEGLVENFPCGPSKIPIFKKKFAAFLNER 258          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1359.2137.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K275_9PHAE3.560e-9994.17Thioredoxin domain-containing protein n=2 Tax=Ecto... [more]
A0A835YVS6_9STRA3.050e-2446.36Thioredoxin-like protein n=1 Tax=Tribonema minus T... [more]
A0A7S4A7N2_9STRA1.770e-1944.17Hypothetical protein n=2 Tax=Pelagomonas calceolat... [more]
F0YB20_AURAN2.930e-1540.00Thioredoxin domain-containing protein (Fragment) n... [more]
K0SW29_THAOC1.120e-1337.96Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
A0A7S3VCG8_9STRA3.760e-1332.43Hypothetical protein (Fragment) n=1 Tax=Chaetocero... [more]
A0A7S2UII6_9STRA2.900e-1237.38Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A7S3ATR9_9EUKA7.110e-1235.92Hypothetical protein n=1 Tax=Haptolina ericina Tax... [more]
B8CB63_THAPS5.740e-1141.46Thioredoxin domain-containing protein (Fragment) n... [more]
A0A7S2A9P7_TRICV1.730e-1029.20Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.30.10coord: 81..194
e-value: 1.3E-15
score: 59.1
NoneNo IPR availablePANTHERPTHR43601:SF10THIOREDOXIN-LIKE 2-2, CHLOROPLASTICcoord: 39..195
NoneNo IPR availablePANTHERPTHR43601FAMILY NOT NAMEDcoord: 39..195
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..20
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 21..206
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..15
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..20
score: 0.583
IPR013766Thioredoxin domainPFAMPF00085Thioredoxincoord: 88..166
e-value: 8.3E-12
score: 45.0
IPR013766Thioredoxin domainPROSITEPS51352THIOREDOXIN_2coord: 57..191
score: 10.126
IPR036249Thioredoxin-like superfamilySUPERFAMILY52833Thioredoxin-likecoord: 87..185

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1359contigE-siliculosus-1a_F_contig1359:885..4409 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1359.2137.1mRNA_E-siliculosus-1a_F_contig1359.2137.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1359 637..4717 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1359.2137.1 ID=prot_E-siliculosus-1a_F_contig1359.2137.1|Name=mRNA_E-siliculosus-1a_F_contig1359.2137.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=207bp
MKSAFAMIGALCCGASSAGAFVLPLGRPTGSSSSSSSSSLAARRTFNRRT
PGGASMMMSSVAEPPAARPTAAQEPERRPNVQQAIDSNDDYVSAMAQHQD
KLVVIKFYDQFCRACDEIRPRYEDLSRSQPEEDAVFFDVEFSGAKDLCKQ
LGIMRLPTVQIYDGTNGRVADLPAGPSRFTDVEEKFAAVISSKKSSGQAA
VEFVAE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036249Thioredoxin-like_sf
IPR013766Thioredoxin_domain