prot_E-siliculosus-1a_F_contig1336.2029.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1336.2029.1
Unique Nameprot_E-siliculosus-1a_F_contig1336.2029.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length505
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1336.2029.1 vs. uniprot
Match: D7FQD3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQD3_ECTSI)

HSP 1 Score: 775 bits (2000), Expect = 4.900e-279
Identity = 478/504 (94.84%), Postives = 483/504 (95.83%), Query Frame = 0
Query:    1 MEAVAGRLRVSCVRGLRWALRARRPPKPAPSYIFTTSQPGCLQAGHFSRLSSVTRPPSEHGHTDPAAAREAAEQGLRILRERSESLEQDDAVEAWRLLLKAACAETVPPDVYFALGNLHYIWGELLEFGKRAELGAEGAAKAVVAEIKDLRKQAMKKRQLAPGSFGSKGRAGKSPTKTTGMSDVSASGKDGRVLSDGAREAGGGRGTPPPEVDHPEAWEWYLKAALSGDTRAMMQLGDIALEAKTKSTANAQHAEEWYRKAALGNPPQPDACFQMARIHHEGIGVPCDPARARELYDEALQAGSSAAAYFLGQRFHVGDEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAYFHGEDGFARDPRAAFRCYSSAADDGHADASYCLGVMQYAMGDAEEAFRRYQTAAEAGNVLAWRNLAAMYALGEGVARSEQMAKSILATFGDEIERREKEEKGAAEDGEEKR 504
            M AV GRLRVSC RGL WAL ARRPP PAPSYIFTTSQPGCL AGHFSRLSSVTRPPSEH HTDPAAAREAAEQGLRILRERSESLEQDDAVEAWRLLLKAACAETVPPDVYFALGNLHYIWGELLEFGKRAELGAEGAAKAVVAEIKDLRKQAMKKRQLAPGSFGSKGRAGKSPTKTT MSDVSA G DGRVLS GAREAGGGRGT PPEVD+PEAWEWYLKAALSGDTRAMMQLGDIALEAKTKS  NAQHAEEWYRKAA+GNPPQPDACFQMARIHHEGIG PCDP RARELYDEALQAGSSAAAYFLGQRFHVGDE XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  A+FHGEDGFARDPRAAFRCYSSAADDGHADASYCLGVMQYAMGDAEEAFRRYQTAAEAGNVLAWRNLAAMYALGEGVARSEQMAK+ILATFGDEIERREKEEK AA+DGEEKR
Sbjct:    1 MAAVVGRLRVSCGRGLWWALHARRPPNPAPSYIFTTSQPGCLHAGHFSRLSSVTRPPSEHEHTDPAAAREAAEQGLRILRERSESLEQDDAVEAWRLLLKAACAETVPPDVYFALGNLHYIWGELLEFGKRAELGAEGAAKAVVAEIKDLRKQAMKKRQLAPGSFGSKGRAGKSPTKTTRMSDVSARGNDGRVLSVGAREAGGGRGTTPPEVDYPEAWEWYLKAALSGDTRAMMQLGDIALEAKTKSAGNAQHAEEWYRKAAVGNPPQPDACFQMARIHHEGIGAPCDPTRARELYDEALQAGSSAAAYFLGQRFHVGDEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSAFFHGEDGFARDPRAAFRCYSSAADDGHADASYCLGVMQYAMGDAEEAFRRYQTAAEAGNVLAWRNLAAMYALGEGVARSEQMAKNILATFGDEIERREKEEKRAAKDGEEKR 504          
BLAST of mRNA_E-siliculosus-1a_F_contig1336.2029.1 vs. uniprot
Match: A0A835YR63_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YR63_9STRA)

HSP 1 Score: 109 bits (272), Expect = 4.260e-23
Identity = 107/277 (38.63%), Postives = 130/277 (46.93%), Query Frame = 0
Query:  239 IALEAKTKSTANAQHAEEWYRKAALGNPPQPDACFQMARIHHEGIGVPC-DPARARELYDEALQAGSSAAAYFLGQRFHVGD-EXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAYFHGEDGFARDPRAAFRCYSSAADDG-----------------HADASYCLGVMQY----AMGDAEEAFRRYQTAAEAGNVLAWRNLAAMYALGEGVARSEQMAKSILATFGDEIERREKE 492
            +A++   +S AN   AE WY +AA G PP PDA FQ+AR++HEG+G    DP RA ELY  A   GSSAA + LG    VGD E                          XXXXXXXXXXXXXXXXXXXX                          +  G  G  R    A   +  A                     HA+A+YC  VM+Y       D   AF  YQTAAEAG+VLAWR +A+M+ LGEGV R E  A+ I+   G  I + E+E
Sbjct:    1 MAMQDPGESAANTPFAEHWYLRAAAGAPPLPDALFQLARVYHEGLGPAGEDPVRALELYQRAAAEGSSAALFLLGHAHSVGDAELGLPRDARAALAYLQRSADIDEHPEAXXXXXXXXXXXXXXXXXXXXEGRYVELVARAAAAGSANALFAEGDLWRRGLAGRERSEEKALHWFELAXXXXXXXXXXXXXXXXXXXXXHAEAAYCAAVMRYHGWGCDKDLRAAFELYQTAAEAGHVLAWREVASMHMLGEGVPRCEATARHIMQVMGKAIHKAEQE 277          
BLAST of mRNA_E-siliculosus-1a_F_contig1336.2029.1 vs. uniprot
Match: A0A7S3L9E1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L9E1_9STRA)

HSP 1 Score: 73.2 bits (178), Expect = 4.880e-12
Identity = 42/89 (47.19%), Postives = 55/89 (61.80%), Query Frame = 0
Query:  394 FHGEDGFARDPRAAFRCYSSAADDGHADASYCLGVMQYAMG----DAEEAFRRYQTAAEAGNVLAWRNLAAMYALGEGVARSEQMAKSI 478
            +HGE+G+ R+   A   +  AAD GHADA+   G M ++      D  +AF  YQ A E GN+  WRN+AA YA GEGVA+S +MAK I
Sbjct:   34 YHGENGYPRNLHLALGDFLKAADAGHADAAVSAGAMLHSGDGVPKDQNKAFELYQHAGELGNLEGWRNVAACYATGEGVAQSLEMAKHI 122          
BLAST of mRNA_E-siliculosus-1a_F_contig1336.2029.1 vs. uniprot
Match: A0A6S8F6I7_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A6S8F6I7_9STRA)

HSP 1 Score: 62.4 bits (150), Expect = 8.350e-7
Identity = 42/127 (33.07%), Postives = 62/127 (48.82%), Query Frame = 0
Query:  206 GTPPPEVDHPEAWEWYLKAALSGDTRAMMQLGDIAL---EAKTKSTANA------QHAEEWYRKAALGNPPQPDACFQMARIHHEGI--GVPCDPARARELYDEALQA-GSSAAAYFLGQRFHVGDE 320
            G P  E +   A  W+  AA  G T AM+QLG++ L   E + +   N       + A +WY KAA  +PP PDA + +  +++EG    +  DPAR+  L   A       +A +F+G     GDE
Sbjct:  217 GEPKLEKNEEAAIRWFSLAAKQGSTDAMVQLGNVLLHRVETEKRQFKNKDVRGKLKEALDWYEKAAAHDPPHPDALYNLGLLYYEGFHDSLEIDPARSFLLIKTAADVCNDPSALFFVGHIGLQGDE 343          
BLAST of mRNA_E-siliculosus-1a_F_contig1336.2029.1 vs. uniprot
Match: A0A7S3PNW5_9STRA (Hypothetical protein n=2 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3PNW5_9STRA)

HSP 1 Score: 62.4 bits (150), Expect = 1.150e-6
Identity = 42/127 (33.07%), Postives = 62/127 (48.82%), Query Frame = 0
Query:  206 GTPPPEVDHPEAWEWYLKAALSGDTRAMMQLGDIAL---EAKTKSTANA------QHAEEWYRKAALGNPPQPDACFQMARIHHEGI--GVPCDPARARELYDEALQA-GSSAAAYFLGQRFHVGDE 320
            G P  E +   A  W+  AA  G T AM+QLG++ L   E + +   N       + A +WY KAA  +PP PDA + +  +++EG    +  DPAR+  L   A       +A +F+G     GDE
Sbjct:  217 GEPKLEKNEEAAIRWFSLAAKQGSTDAMVQLGNVLLHRVETEKRQFKNKDVRGKLKEALDWYEKAAAHDPPHPDALYNLGLLYYEGFHDSLEIDPARSFLLIKTAADVCNDPSALFFVGHIGLQGDE 343          
BLAST of mRNA_E-siliculosus-1a_F_contig1336.2029.1 vs. uniprot
Match: A0A6S7AH26_9BURK (Uncharacterized protein n=5 Tax=Achromobacter TaxID=222 RepID=A0A6S7AH26_9BURK)

HSP 1 Score: 57.8 bits (138), Expect = 3.170e-5
Identity = 33/96 (34.38%), Postives = 53/96 (55.21%), Query Frame = 0
Query:  216 EAWEWYLKAALSGDTRAMMQLGDIALEAKTKSTANAQHAEEWYRKAALGNPPQPDACFQMARIHHEGIGVPCDPARARELYDEALQAGSSAAAYFL 311
            EA+ W+ +AA +G+ ++   LG   L+ K     +   A  W+ +AA  +    DA   +  I++ G  VP D ARAR L++EA++ GS+ A  FL
Sbjct:  225 EAFRWWQRAAEAGEPQSQNLLGLAYLQGKWGVDQDPPVAVSWFERAAAQS--DRDALVNLGEIYYLGEIVPVDYARARSLFEEAIEQGSARAPRFL 318          
BLAST of mRNA_E-siliculosus-1a_F_contig1336.2029.1 vs. uniprot
Match: A0A2S0IBB8_9BURK (Uncharacterized protein n=1 Tax=Achromobacter spanius TaxID=217203 RepID=A0A2S0IBB8_9BURK)

HSP 1 Score: 56.6 bits (135), Expect = 7.340e-5
Identity = 33/103 (32.04%), Postives = 55/103 (53.40%), Query Frame = 0
Query:  216 EAWEWYLKAALSGDTRAMMQLGDIALEAKTKSTANAQHAEEWYRKAALGNPPQPDACFQMARIHHEGIGVPCDPARARELYDEALQAGSSAAAYFLGQRFHVG 318
            EA++W+  AA +G+ ++   LG   +E K     +   A  W+ +AA  +    D    +  I++ G  VP D ARAR L++EA++ GS+ A  FL   ++ G
Sbjct:  225 EAFKWWQHAAEAGEPQSQNLLGLAYVEGKWGVDRDPAVAVSWFERAAAQS--DRDGLVNLGEIYYLGEIVPVDYARARSLFEEAIEQGSARAPRFLSWIYYNG 325          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1336.2029.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
D7FQD3_ECTSI4.900e-27994.84Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YR63_9STRA4.260e-2338.63Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S3L9E1_9STRA4.880e-1247.19Hypothetical protein (Fragment) n=1 Tax=Amphora co... [more]
A0A6S8F6I7_9STRA8.350e-733.07Hypothetical protein n=1 Tax=Aplanochytrium stocch... [more]
A0A7S3PNW5_9STRA1.150e-633.07Hypothetical protein n=2 Tax=Aplanochytrium stocch... [more]
A0A6S7AH26_9BURK3.170e-534.38Uncharacterized protein n=5 Tax=Achromobacter TaxI... [more]
A0A2S0IBB8_9BURK7.340e-532.04Uncharacterized protein n=1 Tax=Achromobacter span... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 69..89
NoneNo IPR availablePANTHERPTHR11102SEL-1-LIKE PROTEINcoord: 213..477
coord: 125..308
NoneNo IPR availablePANTHERPTHR11102:SF147SEL1L ERAD E3 LIGASE ADAPTOR SUBUNITcoord: 213..477
coord: 125..308
NoneNo IPR availableSUPERFAMILY81901HCP-likecoord: 330..477
NoneNo IPR availableSUPERFAMILY81901HCP-likecoord: 213..351
IPR006597Sel1-like repeatSMARTSM00671sel1coord: 269..304
e-value: 2.6E-6
score: 37.0
coord: 230..266
e-value: 5.0
score: 16.1
coord: 383..419
e-value: 1.4E-6
score: 37.8
coord: 452..484
e-value: 54.0
score: 7.3
coord: 420..451
e-value: 43.0
score: 8.1
coord: 305..343
e-value: 0.0021
score: 27.3
IPR006597Sel1-like repeatPFAMPF08238Sel1coord: 269..304
e-value: 0.0065
score: 17.1
coord: 232..262
e-value: 0.12
score: 13.1
coord: 204..229
e-value: 0.056
score: 14.1
coord: 383..419
e-value: 2.9E-4
score: 21.4
coord: 305..343
e-value: 8.7E-4
score: 19.9
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 196..498
e-value: 2.5E-57
score: 196.3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1336contigE-siliculosus-1a_F_contig1336:17425..20818 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1336.2029.1mRNA_E-siliculosus-1a_F_contig1336.2029.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1336 17400..20845 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1336.2029.1 ID=prot_E-siliculosus-1a_F_contig1336.2029.1|Name=mRNA_E-siliculosus-1a_F_contig1336.2029.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=505bp
MEAVAGRLRVSCVRGLRWALRARRPPKPAPSYIFTTSQPGCLQAGHFSRL
SSVTRPPSEHGHTDPAAAREAAEQGLRILRERSESLEQDDAVEAWRLLLK
AACAETVPPDVYFALGNLHYIWGELLEFGKRAELGAEGAAKAVVAEIKDL
RKQAMKKRQLAPGSFGSKGRAGKSPTKTTGMSDVSASGKDGRVLSDGARE
AGGGRGTPPPEVDHPEAWEWYLKAALSGDTRAMMQLGDIALEAKTKSTAN
AQHAEEWYRKAALGNPPQPDACFQMARIHHEGIGVPCDPARARELYDEAL
QAGSSAAAYFLGQRFHVGDEELGIAPDGVRALKFLRQASEKGHAEATFYL
AQAHRSGCPEMGLSQDLGVFGELVQQAAAAGSADALFSLGSAYFHGEDGF
ARDPRAAFRCYSSAADDGHADASYCLGVMQYAMGDAEEAFRRYQTAAEAG
NVLAWRNLAAMYALGEGVARSEQMAKSILATFGDEIERREKEEKGAAEDG
EEKR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR006597Sel1-like