prot_E-siliculosus-1a_F_contig1332.2011.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1332.2011.1
Unique Nameprot_E-siliculosus-1a_F_contig1332.2011.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length490
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1332.2011.1 vs. uniprot
Match: D7FVP9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVP9_ECTSI)

HSP 1 Score: 613 bits (1580), Expect = 1.360e-215
Identity = 397/424 (93.63%), Postives = 402/424 (94.81%), Query Frame = 0
Query:    1 MRGVLFVAILAFYADVDGASAAAGTGSTGPRASSRQRGGDRGGRSAVDRALTARKIAERRKRQDDAVPPDHGRSTGGVDSPTVVIGAVLGERRDGTEGQQSYGAKGGQWESDEEGEXXXXXXXXXXXXXXXXXXXXXXXXGG-AIDSLXXXXXXXXFSEEHGGAGAYDSRGRRDSGRYSSDSRRRPAPGCGPQGPKAGALAGXXXXXXXXXXXXXXXXXXXXXXXXXXXX--RRGAGASSPSSMQKTKATSGVMKSVGKATGKSMKAMVHALQPKSVGLGEILDTWKIEQVIGKPPGRVTKCAATVEFRRDGTVATSFDGRETVSDFTFRAHAWPRACTIEFEAKAFQGPWDEEPVWKVYKGSFSRKLLDPKIIMLEGTIYDVTGKMMWKRRVKSGKFTARRRPSRVTRGGGDRADPGRKKSAR 421
            MRGVLF+AILAFYADVDGASAAAGTGSTG RASSRQRGGDRGG +AVDRALTARKIAERRKR+DDAVPPDHGRSTGGVDSPTVVIGAVLGERRDGTEGQ  YGA+GGQWESDE   XXXXXXXXXXXXXXXXXXXXXXXX   AIDSL XXX      EEHGGAGAYDSRGRRDSGRYSSDSRRRPAPG GPQGPKAGALAGXXXXXXXXXXXXXXXXXXXXXXXXXXXX  R GAGASSPSSMQKTKAT GVMKSVGKATGKSMKAMVHALQPKSVGLGEILDTWKIEQV+GKPPGRVTKCAATVEFRRDGTVATSFDGRETVSDFTFRAHAWPRACTIEFEAKAFQGPWDEEPVWKVYKGSFSRKLLDPKIIMLEGTIYDVTGKMMWKRRVKSGKFTARRRPSRVTRGGGDRADPGRKKSAR
Sbjct:    1 MRGVLFIAILAFYADVDGASAAAGTGSTGLRASSRQRGGDRGGSTAVDRALTARKIAERRKRRDDAVPPDHGRSTGGVDSPTVVIGAVLGERRDGTEGQP-YGAEGGQWESDEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAIDSLDXXXFDDL--EEHGGAGAYDSRGRRDSGRYSSDSRRRPAPGRGPQGPKAGALAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRXGAGASSPSSMQKTKATGGVMKSVGKATGKSMKAMVHALQPKSVGLGEILDTWKIEQVVGKPPGRVTKCAATVEFRRDGTVATSFDGRETVSDFTFRAHAWPRACTIEFEAKAFQGPWDEEPVWKVYKGSFSRKLLDPKIIMLEGTIYDVTGKMMWKRRVKSGKFTARRRPSRVTRGGGDRADPGRKKSAR 421          
BLAST of mRNA_E-siliculosus-1a_F_contig1332.2011.1 vs. uniprot
Match: A0A4D9DH60_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DH60_9STRA)

HSP 1 Score: 146 bits (368), Expect = 2.810e-36
Identity = 73/152 (48.03%), Postives = 98/152 (64.47%), Query Frame = 0
Query:  250 VMKSVGKATGKSMKAMVHALQP-KSVGLGEILDTWKIEQVIGKPPGRVTKCAATVEFRRDGTVATSFDGRETVSDFTFRAHAWPRACTIEFEAKAFQGPWDEEPVWKVYKGSFSRKLLDPKIIMLEGTIYDVTGKMMWKRRVKSGKFTARRR 400
            + K   K T  S+  +   LQP K V L E+L  WK++Q I +P G V +C AT+E R+DGTV T F+G+E V+DF F+   WPR+C IEFEA+AFQGP+D EP  K YKG   R L++   + LEG IYDV G   W+++ + GKF A +R
Sbjct:  167 LFKGAAKITSSSVGKVAGLLQPNKYVSLREVLGVWKVKQKITEPGGEVERCEATLEIRKDGTVVTFFEGKELVTDFLFKERQWPRSCIIEFEARAFQGPYDREPQPKFYKGYVRRSLMNAGSVRLEGKIYDVQGTFFWRQKRQVGKFRAVKR 318          
BLAST of mRNA_E-siliculosus-1a_F_contig1332.2011.1 vs. uniprot
Match: A0A836CFX6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFX6_9STRA)

HSP 1 Score: 94.7 bits (234), Expect = 4.050e-20
Identity = 44/70 (62.86%), Postives = 48/70 (68.57%), Query Frame = 0
Query:  290 GKPPGRVTKCAATVEFRRDGTVATSFDGRETVSDFTFRAHAWPRACTIEFEAKAFQGPWDEEPVWKVYKG 359
            G   G V  C AT+E R DG VAT F GR+ +SDF F AHAWPRAC I FEA+AFQGP D EPV   YKG
Sbjct:   13 GHVGGHVVPCVATLELRADGAVATRFQGRDLLSDFEFTAHAWPRACAIAFEARAFQGPRDPEPVLMRYKG 82          
BLAST of mRNA_E-siliculosus-1a_F_contig1332.2011.1 vs. uniprot
Match: A0A7S2S4V2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2S4V2_9STRA)

HSP 1 Score: 97.1 bits (240), Expect = 1.880e-18
Identity = 57/152 (37.50%), Postives = 82/152 (53.95%), Query Frame = 0
Query:  256 KATGKSMKAMVHALQPKSVGLGEILDTWKIEQVIGKPPGRVTKCAATVEFRRDGTVATSFDGRETVSDFTFRAHAWPRACTIEFEAKAFQGPWDEEPVWKVYKGSFSRKLLDPKIIMLEGTIYDVT---GKMMWK----RRVKSGKFTARRR 400
            K TGK   A  +   PK V   +I+  W+++Q           CAA VE    G V  ++   E  + + F   +WPR+CTI+FEA+AFQGP DE+PV  +Y  SF RK+ D  +I + G IY +T   GK  ++    ++   G FTAR+R
Sbjct:  150 KGTGK---AAYYLASPKHVSRQDIVGVWRLDQT-----ALSASCAANVELTMRGDVLVTYQAEEFRTPYYFSERSWPRSCTIQFEARAFQGPRDEQPVNMLYVASFRRKIADRNVIKMVGKIYQITHSKGKFPFRGSKSQKTLVGTFTARKR 293          
BLAST of mRNA_E-siliculosus-1a_F_contig1332.2011.1 vs. uniprot
Match: A0A7S1D3U6_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D3U6_CYCTE)

HSP 1 Score: 87.0 bits (214), Expect = 1.260e-16
Identity = 47/103 (45.63%), Postives = 58/103 (56.31%), Query Frame = 0
Query:  299 CAATVEFRRDGTVATSFDGRETVSDFTFRAHAWPRACTIEFEAKAFQGPWDEEPVWKVYKGSFSRKLLDPKIIMLEGTIYDVTGKMMWKRRVKSGKFTARRRP 401
            CAA +E    G V   ++ +  VS F FR   WP++C IEFEA+AFQGP DEEPV   YKG F RKL D  ++ + G +Y V        R K G F  RR P
Sbjct:   14 CAANIELTPRGEVLVRYEDKVFVSTFLFRERNWPQSCWIEFEARAFQGPDDEEPVLMRYKGYFRRKLADSSVVKMIGHMYIVPNT-----RKKRGPFAQRRGP 111          
BLAST of mRNA_E-siliculosus-1a_F_contig1332.2011.1 vs. uniprot
Match: A0A7S4MEB1_9STRA (Hypothetical protein (Fragment) n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MEB1_9STRA)

HSP 1 Score: 87.8 bits (216), Expect = 4.390e-15
Identity = 61/185 (32.97%), Postives = 83/185 (44.86%), Query Frame = 0
Query:  244 TKATSGVMKSVGKATGKSM-KAMVHALQPKSVGLGEILDTWKIEQVIGK-PPGRVTKCAATVEF--RRDGTVATSFDG-----------------------------------RETVSDFTFRAHAWPRACTIEFEAKAFQGPWDEEPVWKVYKGSFSRKLLDPKIIMLEGTIYDVT--GKMMWK 387
            TK T G   +   AT K   KA  +   PK V   ++   W+++Q +G  P G    CAA VE   R D  V  S  G                                   RE  + + FR  +WPR+CT+EFEA+AFQGP D+EPV   Y+G F RK+ D  ++ + G IY  +  G+  WK
Sbjct:  216 TKKTLGAASTAAGATLKGTGKAAYYLAAPKRVSRNDVCGVWRLDQSVGPMPDGPFASCAANVELTPRGDCVVRYSPSGGSATAEASXXXXXXXXXXXXXXXXXXXEGGDSNNIREFRTPYKFRERSWPRSCTVEFEARAFQGPDDDEPVTMYYRGYFRRKIADRSVVKIVGNIYLASRGGRGFWK 400          
BLAST of mRNA_E-siliculosus-1a_F_contig1332.2011.1 vs. uniprot
Match: A0A7R9ZAC9_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9ZAC9_9STRA)

HSP 1 Score: 74.3 bits (181), Expect = 5.050e-12
Identity = 40/93 (43.01%), Postives = 55/93 (59.14%), Query Frame = 0
Query:  318 RETVSDFTFRAHAWPRACTIEFEAKAFQGPWDEEPVWKVYKGSFSRKLLDPKIIMLEGTIYDVTGKMM----WK------RRVKSGKFTARRR 400
            +E  + +TFR  AWPR+C +EFEA+AFQGP D+EPV   Y+G F RK+ D  ++ + G IY    +      W+        V+ G FTARRR
Sbjct:   19 KEFRTPYTFRERAWPRSCYVEFEARAFQGPDDDEPVVMFYRGYFRRKIADRSVVKMVGKIYVAKRQRRRPGGWRGDKGGGHGVEVGTFTARRR 111          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1332.2011.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
D7FVP9_ECTSI1.360e-21593.63Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A4D9DH60_9STRA2.810e-3648.03Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
A0A836CFX6_9STRA4.050e-2062.86Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2S4V2_9STRA1.880e-1837.50Hypothetical protein (Fragment) n=1 Tax=Eucampia a... [more]
A0A7S1D3U6_CYCTE1.260e-1645.63Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
A0A7S4MEB1_9STRA4.390e-1532.97Hypothetical protein (Fragment) n=2 Tax=Odontella ... [more]
A0A7R9ZAC9_9STRA5.050e-1243.01Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..489
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..21
score: 0.698

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1332contigE-siliculosus-1a_F_contig1332:15908..19822 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1332.2011.1mRNA_E-siliculosus-1a_F_contig1332.2011.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1332 15852..20549 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1332.2011.1 ID=prot_E-siliculosus-1a_F_contig1332.2011.1|Name=mRNA_E-siliculosus-1a_F_contig1332.2011.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=490bp
MRGVLFVAILAFYADVDGASAAAGTGSTGPRASSRQRGGDRGGRSAVDRA
LTARKIAERRKRQDDAVPPDHGRSTGGVDSPTVVIGAVLGERRDGTEGQQ
SYGAKGGQWESDEEGEDEEEEYDDDDDDDWGDEDDDGGGDGGAIDSLDDD
DEFDDFSEEHGGAGAYDSRGRRDSGRYSSDSRRRPAPGCGPQGPKAGALA
GGGARSSSNRRAYYDDGFGGGGGGGGSRSRRGAGASSPSSMQKTKATSGV
MKSVGKATGKSMKAMVHALQPKSVGLGEILDTWKIEQVIGKPPGRVTKCA
ATVEFRRDGTVATSFDGRETVSDFTFRAHAWPRACTIEFEAKAFQGPWDE
EPVWKVYKGSFSRKLLDPKIIMLEGTIYDVTGKMMWKRRVKSGKFTARRR
PSRVTRGGGDRADPGRKKSARRAYEEEEQEEGWGVSEDGGAGAGSGRRSS
GSGGGGSGGKRRKSSTRARSSSSSGGGKKSRSRSTRDEF*
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