prot_E-siliculosus-1a_F_contig1329.1989.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1329.1989.1
Unique Nameprot_E-siliculosus-1a_F_contig1329.1989.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length471
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig1329.1989.1 vs. uniprot
Match: A0A6H5JYL2_9PHAE (FYVE-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYL2_9PHAE)

HSP 1 Score: 537 bits (1383), Expect = 1.000e-168
Identity = 319/368 (86.68%), Postives = 325/368 (88.32%), Query Frame = 0 
Query:    3 DAAVSPLAAAATSAFVRNSSSKNGVEDVDAPRLGIGMPPQHANDSADAXXXXXXXXXXXXXXXXXXXXXXXXXXXYEGEEGGEQIQDGRFYEVVFETAQLGIVLLRQDGVAVVEEVSSYNGVGGRAAGPFPGDELTEVAGMPTSCLSYDGVVDRIRASPRPISVRFRRALFKSWWGREYTLDLSYWDGHRLDGILLAGGGAGDQAVVGSVDGFRPRKRRLKGVTTLRPRAGALVVSVAGIPVSHLTVSAVTSLLNDIASEPPRRSPHARGIAVGERKKVADGWTETVLANSSSATRGXXXXXXXXXXXXXXXXXRPQGQQRPRRQQHQLLPRDGSSSSRSRRGRGDVIRLVLREVEVHAWPPNWRHEV 370
            DAAVSPLAAAATS FVRNSSSKNG EDVDA RLGIGMPPQHANDSADAXXXXXXXXXXX                 + EEGGEQIQDGRFYEVVFETAQLGIVLLRQ+GVAVVEEVSSYNGVGGRAAGPFPGDELTEVAGMPTSCLSYDGVVDRIRASPRPIS+RFRRALF+SWWGREYTLDLS WDGHRLDGILL GGGAGDQAVVGSVDGFRPRKRRLKGV TLRPRAGALVVSVAGIPVSHLTVSAVTSLLNDIASEP RRSPHARG+A GERK VA GWTETVLAN       XXXXXXXXXXXXXXXXX    QQRPRRQQHQLLPRDGS S RS RG GD+IRLVLREVEVHAWPPNWRHEV
Sbjct: 3308 DAAVSPLAAAATSPFVRNSSSKNGHEDVDALRLGIGMPPQHANDSADAXXXXXXXXXXXLMGASALDLE-------DEEEGGEQIQDGRFYEVVFETAQLGIVLLRQNGVAVVEEVSSYNGVGGRAAGPFPGDELTEVAGMPTSCLSYDGVVDRIRASPRPISLRFRRALFRSWWGREYTLDLSSWDGHRLDGILLVGGGAGDQAVVGSVDGFRPRKRRLKGVPTLRPRAGALVVSVAGIPVSHLTVSAVTSLLNDIASEPSRRSPHARGVAGGERKMVAGGWTETVLANXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQRPRRQQHQLLPRDGSRS-RSNRGTGDMIRLVLREVEVHAWPPNWRHEV 3667
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BLAST of mRNA_E-siliculosus-1a_F_contig1329.1989.1 vs. uniprot
Match: D7FMF5_ECTSI (FYVE-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMF5_ECTSI)

HSP 1 Score: 300 bits (769), Expect = 1.350e-86
Identity = 192/242 (79.34%), Postives = 194/242 (80.17%), Query Frame = 0 
Query:  223 KGVTTLRPRAGALVVSVAGIPVSHLTVSAVTSLLNDIASEPPRRSPHARGIAVGERKKVADGWTETVLANSSSATRGXXXXXXXXXXXXXXXXXRPQGQQRPRRQQHQLLPRDGSSS-SRSRRGRGDVIRLVLREVEVHAWPPNWRHEVQCPGVRATVIDDLEGRDMPLLRAEVGSLDMTHESGPGMARYSAGDKRASLGKSILGTTAGGTGGAGXSSTAGGVDSALLVVPVSRTAAACDAQ 463
            KGV TLRPRAGALVVSVAGIPVSHLTVSAVTSLLNDIASEPPRR                                 XXXXXXXXXXXXXXXXX   GQQRPRRQQHQLLPRDGS S SRS RGRGDVIRLVLREVEVHAWPPNWRHEVQCPGVR TVIDDLEGRDMPLLRAEVGSLDMTHESGPGMAR+SAGDKRASLGKSIL TTAGGT    X  TAGGVD+ALLVVPVSRTAAACDAQ
Sbjct: 3943 KGVPTLRPRAGALVVSVAGIPVSHLTVSAVTSLLNDIASEPPRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-GQQRPRRQQHQLLPRDGSRSRSRSSRGRGDVIRLVLREVEVHAWPPNWRHEVQCPGVRVTVIDDLEGRDMPLLRAEVGSLDMTHESGPGMARHSAGDKRASLGKSILATTAGGTSAXXXXRTAGGVDTALLVVPVSRTAAACDAQ 4183
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BLAST of mRNA_E-siliculosus-1a_F_contig1329.1989.1 vs. uniprot
Match: D7FHV4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHV4_ECTSI)

HSP 1 Score: 224 bits (572), Expect = 1.590e-68
Identity = 150/184 (81.52%), Postives = 151/184 (82.07%), Query Frame = 0 
Query:   39 MPPQHANDSADAXXXXXXXXXXXXXXXXXXXXXXXXXXXYEGEEGGEQIQDGRFYEVVFETAQLGIVLLRQDGVAVVEEVSSYNGVGGRAAGPFPGDELTEVAGMPTSCLSYDGVVDRIRASPRPISVRFRRALFKSWWGREYTLDLSYWDGHRLDGILLAGGGAGDQAVVGSVDGFRPRKRRL 222
            MPPQHANDSADAXXXXXXXXXXXXXXXXXXXXXXXXXX YEGEEGGEQIQDGRFYEVVFETAQLGIVLLRQ                              VAGMPTSCLSYDGVVDRIRASP PIS+RFRRALFKSWWGREYTLDLSYWDGHRLDGILL GGGAGDQAVVGSVDGFRPRKRRL
Sbjct:    1 MPPQHANDSADAXXXXXXXXXXXXXXXXXXXXXXXXXX-YEGEEGGEQIQDGRFYEVVFETAQLGIVLLRQ------------------------------VAGMPTSCLSYDGVVDRIRASPCPISLRFRRALFKSWWGREYTLDLSYWDGHRLDGILLVGGGAGDQAVVGSVDGFRPRKRRL 153
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1329.1989.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JYL2_9PHAE1.000e-16886.68FYVE-type domain-containing protein n=1 Tax=Ectoca... [more]
D7FMF5_ECTSI1.350e-8679.34FYVE-type domain-containing protein n=1 Tax=Ectoca... [more]
D7FHV4_ECTSI1.590e-6881.52Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1329contigE-siliculosus-1a_F_contig1329:16065..21310 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1329.1989.1mRNA_E-siliculosus-1a_F_contig1329.1989.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1329 16065..21310 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1329.1989.1 ID=prot_E-siliculosus-1a_F_contig1329.1989.1|Name=mRNA_E-siliculosus-1a_F_contig1329.1989.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=471bp
AADAAVSPLAAAATSAFVRNSSSKNGVEDVDAPRLGIGMPPQHANDSADA
AAAAAGAAAAALIGASSALDLEDEEQEYEGEEGGEQIQDGRFYEVVFETA
QLGIVLLRQDGVAVVEEVSSYNGVGGRAAGPFPGDELTEVAGMPTSCLSY
DGVVDRIRASPRPISVRFRRALFKSWWGREYTLDLSYWDGHRLDGILLAG
GGAGDQAVVGSVDGFRPRKRRLKGVTTLRPRAGALVVSVAGIPVSHLTVS
AVTSLLNDIASEPPRRSPHARGIAVGERKKVADGWTETVLANSSSATRGS
SAAAAAAAAAAPGRGGRPQGQQRPRRQQHQLLPRDGSSSSRSRRGRGDVI
RLVLREVEVHAWPPNWRHEVQCPGVRATVIDDLEGRDMPLLRAEVGSLDM
THESGPGMARYSAGDKRASLGKSILGTTAGGTGGAGGSSTAGGVDSALLV
VPVSRTAAACDAQVSFNLFN*
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