prot_E-siliculosus-1a_F_contig1325.1977.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1325.1977.1
Unique Nameprot_E-siliculosus-1a_F_contig1325.1977.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length106
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1325.1977.1 vs. uniprot
Match: D7FLF7_ECTSI (Probable Spc3 homolog, subunit of Signal Peptidase Complex n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLF7_ECTSI)

HSP 1 Score: 203 bits (517), Expect = 3.020e-66
Identity = 103/105 (98.10%), Postives = 104/105 (99.05%), Query Frame = 0
Query:    1 MHTAWVRVNAVVFFGLTVLLVLSVLTALSTYLHQGFPDVRKLGVSKFRTFRKSEGTDRLLLNIDVDADLAPAFNWNVKQLFAFVVAEYETPTNPVNQVSQSIRFA 105
            MHTAWVRVNAVVFFGLTVLLVLSVLTALSTYLHQGFPDVRKLGVSKFRTFRKSEGTDRLLLNIDVDADLAPAFNWNVKQLFAFVVAEYETPTNPVNQ SQS+RFA
Sbjct:    1 MHTAWVRVNAVVFFGLTVLLVLSVLTALSTYLHQGFPDVRKLGVSKFRTFRKSEGTDRLLLNIDVDADLAPAFNWNVKQLFAFVVAEYETPTNPVNQASQSVRFA 105          
BLAST of mRNA_E-siliculosus-1a_F_contig1325.1977.1 vs. uniprot
Match: A0A6V1NT77_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1NT77_HETAK)

HSP 1 Score: 132 bits (332), Expect = 4.240e-37
Identity = 63/98 (64.29%), Postives = 79/98 (80.61%), Query Frame = 0
Query:    1 MHTAWVRVNAVVFFGLTVLLVLSVLTALSTYLHQGFPDVRKLGVSKFRTFRKSEGTDRLLLNIDVDADLAPAFNWNVKQLFAFVVAEYETPTNPVNQV 98
            M+T WVRVNAVVFFGLTVLLVL+++ A STYLH+G P+++ LGV+  R+ +   G DR L++ D+DADL PAFNWN+KQLF FVVAEY T  NP+NQV
Sbjct:    4 MNTVWVRVNAVVFFGLTVLLVLAIICAFSTYLHKGEPNIKYLGVNTIRSLKSHGGVDRALISFDLDADLTPAFNWNIKQLFVFVVAEYATEKNPLNQV 101          
BLAST of mRNA_E-siliculosus-1a_F_contig1325.1977.1 vs. uniprot
Match: A0A835YJ42_9STRA (Signal peptidase 22kDa subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJ42_9STRA)

HSP 1 Score: 130 bits (326), Expect = 3.070e-36
Identity = 60/98 (61.22%), Postives = 80/98 (81.63%), Query Frame = 0
Query:    1 MHTAWVRVNAVVFFGLTVLLVLSVLTALSTYLHQGFPDVRKLGVSKFRTFRKSEGTDRLLLNIDVDADLAPAFNWNVKQLFAFVVAEYETPTNPVNQV 98
            M+T WVR+NAVVFFGLTVLL L+++TA STYLH+G P V+ L ++K ++FR     DR ++N D++ADLAPAFNWN+KQ+F FVVAE+ T TNP+NQ+
Sbjct:    1 MNTVWVRLNAVVFFGLTVLLGLALMTATSTYLHEGHPTVKTLRLNKIKSFRSQSKVDRAIINFDLEADLAPAFNWNIKQIFVFVVAEFATKTNPLNQI 98          
BLAST of mRNA_E-siliculosus-1a_F_contig1325.1977.1 vs. uniprot
Match: A0A7S2XZ74_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZ74_9STRA)

HSP 1 Score: 122 bits (307), Expect = 2.250e-33
Identity = 58/98 (59.18%), Postives = 77/98 (78.57%), Query Frame = 0
Query:    1 MHTAWVRVNAVVFFGLTVLLVLSVLTALSTYLHQGFPDVRKLGVSKFRTFRKSEGTDRLLLNIDVDADLAPAFNWNVKQLFAFVVAEYETPTNPVNQV 98
            M+T WVR+NAVVFFG TVLL L+ + + ST+LH+G P ++ LG++  R+ R  +G DR+L++ D+DADL+ AFNWN+KQLF FVVAEY T TNP NQV
Sbjct:    1 MNTIWVRLNAVVFFGFTVLLCLACMCSFSTFLHKGEPHIKYLGLNTIRSMRAQKGGDRVLISFDIDADLSGAFNWNIKQLFVFVVAEYATKTNPFNQV 98          
BLAST of mRNA_E-siliculosus-1a_F_contig1325.1977.1 vs. uniprot
Match: A0A7S2SN40_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SN40_9STRA)

HSP 1 Score: 118 bits (296), Expect = 1.610e-31
Identity = 59/98 (60.20%), Postives = 73/98 (74.49%), Query Frame = 0
Query:    1 MHTAWVRVNAVVFFGLTVLLVLSVLTALSTYLHQGFPDVRKLGVSKFRTFRKSEGTDRLLLNIDVDADLAPAFNWNVKQLFAFVVAEYETPTNPVNQV 98
            MHT WVR+NAVVFFGLTV++VL+VLT  ST  H+G+P V  L ++   T R     D  +L+ D+ ADL+PAFNWN+KQLF FVVAEY T TNP+NQV
Sbjct:    1 MHTVWVRLNAVVFFGLTVIVVLAVLTWFSTVTHRGYPTVDTLQLNSIGTLRNHGERDIAILSFDLHADLSPAFNWNIKQLFVFVVAEYRTKTNPLNQV 98          
BLAST of mRNA_E-siliculosus-1a_F_contig1325.1977.1 vs. uniprot
Match: A0A7R9UGA1_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UGA1_9STRA)

HSP 1 Score: 114 bits (285), Expect = 7.590e-30
Identity = 61/99 (61.62%), Postives = 69/99 (69.70%), Query Frame = 0
Query:    1 MHTAWVRVNAVVFFGLTVLLVLSVLTALSTYL-HQGFPDVRKLGVSKFRTFRKSEGTDRLLLNIDVDADLAPAFNWNVKQLFAFVVAEYETPTNPVNQV 98
            MHT WVR+NAVVFF  TVLL LS L A+ T L H G P V  L + + R+ RK    DR +L  D+DADL  AFNWNVKQLF FVVAEY T TNP+NQV
Sbjct:   18 MHTIWVRLNAVVFFSFTVLLALSTLAAVQTMLFHDGQPVVHTLRLRELRSLRKHANIDRAMLTFDIDADLRGAFNWNVKQLFVFVVAEYATQTNPLNQV 116          
BLAST of mRNA_E-siliculosus-1a_F_contig1325.1977.1 vs. uniprot
Match: A0A7S4J3F9_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4J3F9_9STRA)

HSP 1 Score: 113 bits (283), Expect = 1.050e-29
Identity = 58/100 (58.00%), Postives = 72/100 (72.00%), Query Frame = 0
Query:    1 MHTAWVRVNAVVFFGLTVLLVLSVLTALSTYLHQGF--PDVRKLGVSKFRTFRKSEGTDRLLLNIDVDADLAPAFNWNVKQLFAFVVAEYETPTNPVNQV 98
            MHT WVR+NAVVFFGLTVLL LS+L ALS   H     PDV++L +   R+ +   G DR LL+ D+D DL PAF+WN+KQLF +VVA YE+ TNP NQ+
Sbjct:    1 MHTVWVRLNAVVFFGLTVLLGLSILAALSKSGHSNRYRPDVKRLELKTLRSLKSHGGVDRALLSFDIDVDLRPAFHWNIKQLFVYVVASYESDTNPNNQI 100          
BLAST of mRNA_E-siliculosus-1a_F_contig1325.1977.1 vs. uniprot
Match: A0A7S2XM83_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XM83_9STRA)

HSP 1 Score: 110 bits (276), Expect = 1.440e-28
Identity = 58/100 (58.00%), Postives = 73/100 (73.00%), Query Frame = 0
Query:    1 MHTAWVRVNAVVFFGLTVLLVLSVLTALSTYLH--QGFPDVRKLGVSKFRTFRKSEGTDRLLLNIDVDADLAPAFNWNVKQLFAFVVAEYETPTNPVNQV 98
            MHT WVR+NAVVFFGLTVLL LSVL A+S   H  +  P V KL +++ R+ +   G DR LL+ D+ AD+ PAF+WN+KQLF +VVA YET TNP NQ+
Sbjct:    5 MHTVWVRLNAVVFFGLTVLLGLSVLAAISAIGHSTRHKPVVSKLSLNQLRSLKSHGGVDRALLSFDLHADMRPAFHWNIKQLFVYVVASYETDTNPNNQI 104          
BLAST of mRNA_E-siliculosus-1a_F_contig1325.1977.1 vs. uniprot
Match: B8CCG8_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CCG8_THAPS)

HSP 1 Score: 108 bits (271), Expect = 6.790e-28
Identity = 56/100 (56.00%), Postives = 72/100 (72.00%), Query Frame = 0
Query:    1 MHTAWVRVNAVVFFGLTVLLVLSVLTALSTYLH--QGFPDVRKLGVSKFRTFRKSEGTDRLLLNIDVDADLAPAFNWNVKQLFAFVVAEYETPTNPVNQV 98
            MHT WVR+NAVVFFGLTVLL LS+L ALS   H  +  P + KL ++  R+ +   G DR LL+ D+ AD+ PAF+WN+KQ+F +VVA Y+T TNP NQV
Sbjct:    1 MHTVWVRLNAVVFFGLTVLLCLSILAALSKIGHTRRYQPKIHKLALNNLRSVKNHGGVDRALLSFDLHADMNPAFHWNIKQIFVYVVATYKTDTNPKNQV 100          
BLAST of mRNA_E-siliculosus-1a_F_contig1325.1977.1 vs. uniprot
Match: A0A7R9WMP4_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WMP4_9STRA)

HSP 1 Score: 108 bits (270), Expect = 4.630e-27
Identity = 55/100 (55.00%), Postives = 70/100 (70.00%), Query Frame = 0
Query:    1 MHTAWVRVNAVVFFGLTVLLVLSVLTALSTYLHQGF--PDVRKLGVSKFRTFRKSEGTDRLLLNIDVDADLAPAFNWNVKQLFAFVVAEYETPTNPVNQV 98
            MHT WVR+NAVVFFGLTVLL LS L A+S   H  +  P +  L + K R+ +   G DR LL+ D+ AD+APAF+WN+KQLF +VVA YETP   +NQ+
Sbjct:   67 MHTLWVRLNAVVFFGLTVLLGLSCLAAVSKIGHSLYYKPVIHNLEIRKLRSLKSHGGVDRALLSFDIHADMAPAFHWNIKQLFVYVVASYETPNKKINQI 166          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1325.1977.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FLF7_ECTSI3.020e-6698.10Probable Spc3 homolog, subunit of Signal Peptidase... [more]
A0A6V1NT77_HETAK4.240e-3764.29Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A835YJ42_9STRA3.070e-3661.22Signal peptidase 22kDa subunit n=1 Tax=Tribonema m... [more]
A0A7S2XZ74_9STRA2.250e-3359.18Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S2SN40_9STRA1.610e-3160.20Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7R9UGA1_9STRA7.590e-3061.62Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7S4J3F9_9STRA1.050e-2958.00Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A7S2XM83_9STRA1.440e-2858.00Hypothetical protein (Fragment) n=1 Tax=Attheya se... [more]
B8CCG8_THAPS6.790e-2856.00Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]
A0A7R9WMP4_9STRA4.630e-2755.00Hypothetical protein n=1 Tax=Craspedostauros austr... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007653Signal peptidase complex subunit 3PFAMPF04573SPC22coord: 5..99
e-value: 1.2E-25
score: 90.0
IPR007653Signal peptidase complex subunit 3PIRSFPIRSF016089SPC3coord: 1..104
e-value: 3.6E-19
score: 66.8
IPR007653Signal peptidase complex subunit 3PANTHERPTHR12804MICROSOMAL SIGNAL PEPTIDASE 23 KD SUBUNIT SPC22/23coord: 1..99
NoneNo IPR availablePANTHERPTHR12804:SF0SIGNAL PEPTIDASE COMPLEX SUBUNIT 3coord: 1..99
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 33..105
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..32
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..11
NoneNo IPR availableTMHMMTMhelixcoord: 10..32

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1325contigE-siliculosus-1a_F_contig1325:13793..16794 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1325.1977.1mRNA_E-siliculosus-1a_F_contig1325.1977.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1325 13793..16794 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1325.1977.1 ID=prot_E-siliculosus-1a_F_contig1325.1977.1|Name=mRNA_E-siliculosus-1a_F_contig1325.1977.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=106bp
MHTAWVRVNAVVFFGLTVLLVLSVLTALSTYLHQGFPDVRKLGVSKFRTF
RKSEGTDRLLLNIDVDADLAPAFNWNVKQLFAFVVAEYETPTNPVNQVSQ
SIRFA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007653SPC3