prot_E-siliculosus-1a_F_contig1324.1972.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1324.1972.1
Unique Nameprot_E-siliculosus-1a_F_contig1324.1972.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length436
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1324.1972.1 vs. uniprot
Match: A0A6H5L805_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L805_9PHAE)

HSP 1 Score: 527 bits (1357), Expect = 1.110e-178
Identity = 327/371 (88.14%), Postives = 331/371 (89.22%), Query Frame = 0
Query:   25 RRLSLEVPRTAADRWVDEGGNYGAGEEQRRSTGAGGAARQSGCTSDDGGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSLPQAGAXXXXXXXXGVEAGEGHVEEKEGEGRKGAKAXXXXXXXXXXXXXXXXXXSGRDAGXXXXGRSSSRRWRSIDKLSRALGSTRRRTSRQGGVARGEEGERSEQQKMNFFTEKDLDELLHSTFFIKMCDDASWLYVEDHPFQPELNWLLSLWGGYKIAPRFQGEVKQNEAHRMLFQAENGRHRGHVRIRSRATNTFLFFLGIKQPLTWVAWDRDVVGGEWEDLKLEWVGKPQGPDGVLVGDERGRVVIRSRPMKGYVSWNGSRFTHVPGREGATVFMLQRMAPS 395
            RRLSLEVPRTAADRWVDEGGNYGAG+EQRR+ GA GAARQSGC SDDGGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   SLPQ GA         VEAG+G VEEKEG GR GAK    XXXXXXXXXX     S RD  XXXX   S+ RWRSIDKLSRALGSTRRRTSRQGG ARGE GE SEQ KMNFFTEKDLDELLHSTFFIKMCDDASWLYVEDHPFQPELNWLLSLWGGYKIAPRFQGEVKQNEAHRMLFQAENGRHR HVRIRSRATNTFLFFLGIKQPLTWVAWDRDVVGGEWEDLKLEWVGKPQGPDGVLVGDERGRVVIRSRPMKGYVSWNGSRFTHVPGREGATVFMLQRMAPS
Sbjct:  369 RRLSLEVPRTAADRWVDEGGNYGAGKEQRRAAGADGAARQSGCASDDGGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---SLPQVGASAAAGAAGEVEAGKGDVEEKEGGGRNGAKTSVAXXXXXXXXXXTGLSGSWRDGXXXXXXXXSNSRWRSIDKLSRALGSTRRRTSRQGGAARGEGGEGSEQ-KMNFFTEKDLDELLHSTFFIKMCDDASWLYVEDHPFQPELNWLLSLWGGYKIAPRFQGEVKQNEAHRMLFQAENGRHRDHVRIRSRATNTFLFFLGIKQPLTWVAWDRDVVGGEWEDLKLEWVGKPQGPDGVLVGDERGRVVIRSRPMKGYVSWNGSRFTHVPGREGATVFMLQRMAPS 735          
BLAST of mRNA_E-siliculosus-1a_F_contig1324.1972.1 vs. uniprot
Match: D8LSC8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSC8_ECTSI)

HSP 1 Score: 364 bits (934), Expect = 5.560e-119
Identity = 256/297 (86.20%), Postives = 257/297 (86.53%), Query Frame = 0
Query:   25 RRLSLEVPRTAADRWVDEGGNYGAGEEQRRSTGAGGAARQSGCTSDDGGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSLPQAGAXXXXXXXXGVEAGEGHVEEKEGEGRKGAKAXXXXXXXXXXXXXXXXXX-SGRDAGXXXXGRSSSRRWRSIDKLSRALGSTRRRTSRQGGVARGEEGERSEQQKMNFFTEKDLDELLHSTFFIKMCDDASWLYVEDHPFQPELNWLLSLWGGYKIAPRFQGEVKQNEAHRMLFQAENGRHRGHVRIRSRATNTFLFFLGIKQPLTWV 320
            RRLSLEVPRTAADRWVDEGGNYGAGEEQ+R  GAGGAARQ GCTSDDGGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  SSLPQAGA XXXXXXX  E GE H              XXXXXXXXXXXX       SGRD G    GRSSSRRWRSIDKLSRALGSTRRRTSRQGG ARGE GE SEQ KMNFFTEKDLDELLHSTFFIKMCDDASWLYVEDHPFQPELNWLLSLWGGYKIAPRFQGEVKQNEAHRMLFQAENGRHRGHVRIRSRATNTFLFFLGIKQPLTWV
Sbjct:  164 RRLSLEVPRTAADRWVDEGGNYGAGEEQQRVAGAGGAARQIGCTSDDGGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKPSSLPQAGASXXXXXXXXXETGEEHXXXXXXXXXXXXXXXXXXXXXXXXXXSATELSGSGRDVGGSGGGRSSSRRWRSIDKLSRALGSTRRRTSRQGGAARGEGGEGSEQ-KMNFFTEKDLDELLHSTFFIKMCDDASWLYVEDHPFQPELNWLLSLWGGYKIAPRFQGEVKQNEAHRMLFQAENGRHRGHVRIRSRATNTFLFFLGIKQPLTWV 459          
BLAST of mRNA_E-siliculosus-1a_F_contig1324.1972.1 vs. uniprot
Match: A0A835ZHV2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHV2_9STRA)

HSP 1 Score: 162 bits (410), Expect = 4.920e-41
Identity = 90/205 (43.90%), Postives = 123/205 (60.00%), Query Frame = 0
Query:  191 LGSTRRRTSRQGGVARGEEGERSEQQKMNFFTEKDLDELLHSTFFIKMCDDASWLYVEDHPFQPE----LNWLLSLWG-GYKIAPRFQGEVKQNEAHRMLFQAENGRHRGHVRIRSRATNTFLFFLGIKQPLTWVAWDRDVVGGEWEDLKLEWVGKPQGPDGVLVGDERGRVVIRSRPMKGYVSWNGSRFTHVPGREGATVFMLQ 390
            L + RRR  R GG+ RG   E     +   FT     EL+ S FF+++ DD SW+YVE   +QP+    L W ++L+  GYK+  R+ G+V  ++A+RMLFQ E GR  GHV +RSR TNT LF LG+++P T VAWDR+V GG+WED+++EW             +  G VVI  +   GY+ W G RF HV  R+ A+ FMLQ
Sbjct:  318 LATARRRRRRHGGIERGR-SEGGLDLQPYLFTRATAHELMDSLFFMRVVDDDSWVYVEHDLYQPQEGAGLGWAMNLFHRGYKVGVRYAGDVDPHDANRMLFQCEPGRASGHVWLRSRGTNTLLFMLGLRKPRTLVAWDREVPGGDWEDMRIEWC-----------PEHNGHVVISCKRAGGYLQWTGDRFGHVDERDCASRFMLQ 510          
BLAST of mRNA_E-siliculosus-1a_F_contig1324.1972.1 vs. uniprot
Match: A0A835YVS8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVS8_9STRA)

HSP 1 Score: 161 bits (407), Expect = 4.300e-40
Identity = 80/187 (42.78%), Postives = 122/187 (65.24%), Query Frame = 0
Query:  212 RSEQQKMNFFTEKDLDELLHSTFFIKMCDD-ASWLYVEDHPFQPE----LNWLLSLWG-GYKIAPRFQGEVKQNEAHRMLFQAENGRHRGHVRIRSRATNTFLFFLGIKQPLTWVAWDRDVVGGEWEDLKLEWVGKPQGPDGVLVGDERGRVVIRSRPMKGYVSWNGSRFTHVPGREGATVFMLQRM 392
            R+E  +   FT +   ELL S FFIK+ D+  +W++VED   +      L W +SL+  GY++  R+ G+V  ++AHR++FQ E GR  GHVRIRSR +NT+LF LG+++PLT VAWDR+V GG+WED+++ W+ +          ++ GRV+IR +   GY+ W G++F H P ++ A+ FMLQ +
Sbjct:  423 RAEALRPRHFTAETAHELLDSMFFIKLVDEEGAWMFVEDDLHESREGGGLGWAMSLFHRGYRVGARYAGDVGPHDAHRLVFQCEPGRAAGHVRIRSRGSNTYLFMLGLRRPLTLVAWDREVAGGDWEDMRIVWLPR---------AEDEGRVLIRCKTAGGYLQWTGTKFVHTPVKDSASRFMLQSL 600          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1324.1972.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5L805_9PHAE1.110e-17888.14Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
D8LSC8_ECTSI5.560e-11986.20Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835ZHV2_9STRA4.920e-4143.90Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YVS8_9STRA4.300e-4042.78Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1324contigE-siliculosus-1a_F_contig1324:29840..34020 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1324.1972.1mRNA_E-siliculosus-1a_F_contig1324.1972.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1324 29840..34020 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1324.1972.1 ID=prot_E-siliculosus-1a_F_contig1324.1972.1|Name=mRNA_E-siliculosus-1a_F_contig1324.1972.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=436bp
YPPLFRSRPKPHPGPGQTPPPPPRRRLSLEVPRTAADRWVDEGGNYGAGE
EQRRSTGAGGAARQSGCTSDDGGAGGHGAGSRGSRRRLRRLTGNNNNNNN
NNNNNKLSSLPQAGASAAAGAAGGVEAGEGHVEEKEGEGRKGAKASVAAA
VVAATASATGLSGSGRDAGGSGGGRSSSRRWRSIDKLSRALGSTRRRTSR
QGGVARGEEGERSEQQKMNFFTEKDLDELLHSTFFIKMCDDASWLYVEDH
PFQPELNWLLSLWGGYKIAPRFQGEVKQNEAHRMLFQAENGRHRGHVRIR
SRATNTFLFFLGIKQPLTWVAWDRDVVGGEWEDLKLEWVGKPQGPDGVLV
GDERGRVVIRSRPMKGYVSWNGSRFTHVPGREGATVFMLQRMAPSSSSSS
GATRSLSSSRRTRRGGGDGGGGGGSRGGGGYSEAR*
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