prot_E-siliculosus-1a_F_contig1311.1901.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1311.1901.1
Unique Nameprot_E-siliculosus-1a_F_contig1311.1901.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length163
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig1311.1901.1 vs. uniprot
Match: D8LD52_ECTSI (2Fe-2S ferredoxin-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LD52_ECTSI)

HSP 1 Score: 319 bits (817), Expect = 3.700e-110
Identity = 159/162 (98.15%), Postives = 161/162 (99.38%), Query Frame = 0 
Query:    1 MTTFTRVLVALVLSVSSASAFVPCPSALTKSNHRAIHDPAPAATTAVAPRPRYQQHAGPLLMGWGDALGKAFANEDMAPKKNPGLKNAPNTCMVTVNGKTIQAVQGQRLRDVVLAAKAKIEYGCEKGDCGTCESIVDGRKIRICKAIVPRNKTKVNIKTKFG 162
            MTTFTR+LVALVLSVSSASAFVPCPSALTKSNHRAIHDPAPAATTA APRPRYQQHAGPLLMGWGDALGKAFANEDMAP+KNPGLKNAPNTCMVTVNGKTIQAVQGQRLRDVVLAAKAKIEYGCEKGDCGTCESIVDGRKIRICKAIVPRNKTKVNIKTKFG
Sbjct:    1 MTTFTRILVALVLSVSSASAFVPCPSALTKSNHRAIHDPAPAATTAAAPRPRYQQHAGPLLMGWGDALGKAFANEDMAPQKNPGLKNAPNTCMVTVNGKTIQAVQGQRLRDVVLAAKAKIEYGCEKGDCGTCESIVDGRKIRICKAIVPRNKTKVNIKTKFG 162
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BLAST of mRNA_E-siliculosus-1a_F_contig1311.1901.1 vs. uniprot
Match: A0A836CBS9_9STRA (2Fe-2S ferredoxin-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBS9_9STRA)

HSP 1 Score: 116 bits (290), Expect = 8.480e-31
Identity = 53/99 (53.54%), Postives = 68/99 (68.69%), Query Frame = 0 
Query:   62 MGWGDALGKAFANEDMAPKKNPGLKNAPNTCMVTVNGKTIQAVQGQRLRDVVLAAKAKIEYGCEKGDCGTCESIVDGRKIRICKAIVPRNKTKVNIKTK 160
            MG+GDA   AF+NE+   K+N GLKN P    V ++GK +QAV GQRL  V  +A  KI Y C+KGDCGTCE++ DG+KIR+C+ IVP N     +KTK
Sbjct:    1 MGFGDAFKNAFSNEEFGAKQNAGLKNGPKYVDVIIDGKKVQAVAGQRLSQVCASAGVKISYNCQKGDCGTCEALGDGKKIRVCQTIVPLNAKSFTVKTK 99
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BLAST of mRNA_E-siliculosus-1a_F_contig1311.1901.1 vs. uniprot
Match: A0A4D9DAQ6_9STRA (2Fe-2S ferredoxin-type domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DAQ6_9STRA)

HSP 1 Score: 104 bits (260), Expect = 1.240e-25
Identity = 53/111 (47.75%), Postives = 71/111 (63.96%), Query Frame = 0 
Query:   53 YQQHAGPLLMGWGDALGKAFANEDMA-PKKNPGLKNAPNTCMVTVN--GKTIQAVQGQRLRDVVLAAKAKIEYGCEKGDCGTCESIVDGRKIRICKAIVPRN--KTKVNIK 158
            +     P+ MGW DA+ K F NE+M+ P  N GLKN P T  +T    GK + AV GQ L+DV  AA+  I+Y C+KG+CGTCE +++G+K+R C  IVPR   K +V IK
Sbjct:   39 HSSRVAPVHMGWFDAVKKGFENEEMSQPAPNAGLKNGPPTVSITFMPAGKQVTAVAGQSLKDVAQAARIPIKYNCKKGECGTCEVVLNGKKVRTCVGIVPRGARKNEVTIK 149
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BLAST of mRNA_E-siliculosus-1a_F_contig1311.1901.1 vs. uniprot
Match: A0A7S4JWQ5_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JWQ5_9STRA)

HSP 1 Score: 94.0 bits (232), Expect = 1.330e-21
Identity = 40/93 (43.01%), Postives = 65/93 (69.89%), Query Frame = 0 
Query:   64 WGDALGKAFANED-MAPKKNPGLKNAPNTCMVTVNGKTIQAVQGQRLRDVVLAAKAKIEYGCEKGDCGTCESIVDGRKIRICKAIVPRNKTKV 155
            +G+AL  AF+N+D +  ++N GLK  P+   VT+NGK ++AV GQ++  V  +A+ KI Y C+KGDCGTCE  ++GR ++ C+ ++P+ K  +
Sbjct:   41 FGNALKGAFSNDDSLGKQQNAGLKGGPDYTEVTINGKQVKAVVGQKVSQVAASARVKISYSCKKGDCGTCEINMNGRVVKACQGVIPKGKCNI 133
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BLAST of mRNA_E-siliculosus-1a_F_contig1311.1901.1 vs. uniprot
Match: A0A7S2W1C0_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2W1C0_9STRA)

HSP 1 Score: 94.7 bits (234), Expect = 2.380e-21
Identity = 46/99 (46.46%), Postives = 65/99 (65.66%), Query Frame = 0 
Query:   61 LMGWGDALGKAFAN-EDMAPKKNPGLKNAPNTC-MVTVNGKTIQAVQGQRLRDVVLAAKAKIEYGCEKGDCGTCESIVDGRKIRICKAIVPRNKTKVNI 157
            L G+GDA   AFAN E+M   +N GLKN PN    V++NGK+++A+ GQ+L  V   A+ KI Y C+ G CGTC   V+GR+ + C+A+VP  K  +N+
Sbjct:   89 LNGFGDAFKSAFANDENMGTAQNAGLKNGPNVNESVSINGKSVKAIVGQKLSVVAAQARVKIPYSCKSGSCGTCVVKVNGRQAKACQAVVPSGKCAINV 187
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BLAST of mRNA_E-siliculosus-1a_F_contig1311.1901.1 vs. uniprot
Match: A0A7S1C0U8_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1C0U8_9STRA)

HSP 1 Score: 89.0 bits (219), Expect = 1.790e-19
Identity = 43/99 (43.43%), Postives = 59/99 (59.60%), Query Frame = 0 
Query:   58 GPLLMGWGDALGKAFANEDMAPKKNPGLKNAPNTC-MVTVNGKTIQAVQGQRLRDVVLAAKAKIEYGCEKGDCGTCESIVDGRKIRICKAIVPRNKTKV 155
            G L M W      AF NED+AP KN GL N P T   VT+NGK ++A+ GQ++  V  AA+ +I + C  GDCGTC   ++GR  + C + +PR K  +
Sbjct:   55 GSLKMNW---FADAFKNEDIAPPKNAGLTNGPETNDNVTINGKKVKAITGQKVAVVASAARVRIPFNCNSGDCGTCVIKMNGRNAKACVSKIPRGKCSI 150
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BLAST of mRNA_E-siliculosus-1a_F_contig1311.1901.1 vs. uniprot
Match: A0A7R9VKD2_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9VKD2_9STRA)

HSP 1 Score: 88.2 bits (217), Expect = 2.360e-19
Identity = 43/99 (43.43%), Postives = 59/99 (59.60%), Query Frame = 0 
Query:   58 GPLLMGWGDALGKAFANEDMAPKKNPGLKNAPNTCM-VTVNGKTIQAVQGQRLRDVVLAAKAKIEYGCEKGDCGTCESIVDGRKIRICKAIVPRNKTKV 155
            G  L  +G A   AFANED+  K+N GL   P T   V+VNGK + AV GQ++  V  AA+ KI Y C  GDCGTC   ++ RK++ C+A +P    ++
Sbjct:   36 GTSLNIFGKAFSDAFANEDVGEKQNAGLTGGPRTNENVSVNGKAVSAVVGQKVSVVAAAARVKIPYNCRNGDCGTCTVKMNNRKVKACQATIPAGNCRI 134
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BLAST of mRNA_E-siliculosus-1a_F_contig1311.1901.1 vs. uniprot
Match: A0A7S1CYE3_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1CYE3_CYCTE)

HSP 1 Score: 88.6 bits (218), Expect = 2.590e-19
Identity = 46/93 (49.46%), Postives = 60/93 (64.52%), Query Frame = 0 
Query:   64 WGDALGKAFANEDMAPKKNP---GLKNA-PNTCMVTVNGKTIQAVQGQRLRDVVLAAKAKIEYGCEKGDCGTCESIVDGRKIRICKAIVPRNK 152
            +GDAL  AFAN+    KKN    GLK   P    VT+NGK I+AV GQ++  V  AA+ KI Y C+KGDCGTCE +++GR  + C+A +P  K
Sbjct:   55 FGDALKGAFANDPTLGKKNKESAGLKGGGPKYDQVTLNGKPIKAVAGQKVSQVAAAARVKITYSCKKGDCGTCEILMNGRMTKACQAKIPAGK 147
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BLAST of mRNA_E-siliculosus-1a_F_contig1311.1901.1 vs. uniprot
Match: A0A7R9VC32_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9VC32_9STRA)

HSP 1 Score: 84.0 bits (206), Expect = 4.500e-18
Identity = 38/83 (45.78%), Postives = 57/83 (68.67%), Query Frame = 0 
Query:   64 WGDALGKAFAN-EDMAPKKNPGLKNAPNTCMVTVNGKTIQAVQGQRLRDVVLAAKAKIEYGCEKGDCGTCESIVDGRKIRICK 145
            +G+AL  AF N E +  ++N GLK  P+   VT+NGK ++AV GQ++  V  +A+ KI Y C+KGDCGTCE  ++GR ++ C+
Sbjct:   21 FGNALKNAFGNDESLGERENAGLKGGPDYNEVTINGKPVKAVVGQKVSQVAASARVKITYSCKKGDCGTCEINMNGRVVKACQ 103
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BLAST of mRNA_E-siliculosus-1a_F_contig1311.1901.1 vs. uniprot
Match: A0A7S3Q0A3_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q0A3_9STRA)

HSP 1 Score: 84.3 bits (207), Expect = 1.580e-17
Identity = 42/97 (43.30%), Postives = 59/97 (60.82%), Query Frame = 0 
Query:   61 LMGWGDALGKAFANEDMAPK-KNPGLKNAPNTC-MVTVNGKTIQAVQGQRLRDVVLAAKAKIEYGCEKGDCGTCESIVDGRKIRICKAIVPRNKTKV 155
            L G+GDA   AFA++D   K +N GL   P T   V++NGK + A+ GQ++  V  +A+ KI Y C KGDCGTC   ++GR  + C+ IVP  K  +
Sbjct:   69 LNGFGDAFKNAFASDDSLGKAQNAGLSGGPKTNDNVSINGKKVNAIVGQKVSVVAASARVKISYNCNKGDCGTCNVKINGRVQKACQQIVPAGKCNI 165
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1311.1901.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LD52_ECTSI3.700e-11098.152Fe-2S ferredoxin-type domain-containing protein n... [more]
A0A836CBS9_9STRA8.480e-3153.542Fe-2S ferredoxin-type domain-containing protein n... [more]
A0A4D9DAQ6_9STRA1.240e-2547.752Fe-2S ferredoxin-type domain-containing protein n... [more]
A0A7S4JWQ5_9STRA1.330e-2143.01Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A7S2W1C0_9STRA2.380e-2146.46Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
A0A7S1C0U8_9STRA1.790e-1943.43Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
A0A7R9VKD2_9STRA2.360e-1943.43Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]
A0A7S1CYE3_CYCTE2.590e-1949.46Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
A0A7R9VC32_9STRA4.500e-1845.78Hypothetical protein (Fragment) n=1 Tax=Pseudictyo... [more]
A0A7S3Q0A3_9STRA1.580e-1743.30Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012675Beta-grasp domain superfamilyGENE3D3.10.20.30coord: 91..159
e-value: 1.9E-7
score: 32.9
IPR0010412Fe-2S ferredoxin-type iron-sulfur binding domainPFAMPF00111Fer2coord: 94..140
e-value: 2.4E-6
score: 27.4
IPR0060582Fe-2S ferredoxin, iron-sulphur binding sitePROSITEPS001972FE2S_FER_1coord: 124..132
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..15
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 21..162
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..20
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..20
score: 0.88
NoneNo IPR availableTMHMMTMhelixcoord: 7..29
IPR0360102Fe-2S ferredoxin-like superfamilySUPERFAMILY542922Fe-2S ferredoxin-likecoord: 70..155

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1311contigE-siliculosus-1a_F_contig1311:16834..19836 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1311.1901.1mRNA_E-siliculosus-1a_F_contig1311.1901.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1311 16786..21108 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1311.1901.1 ID=prot_E-siliculosus-1a_F_contig1311.1901.1|Name=mRNA_E-siliculosus-1a_F_contig1311.1901.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=163bp
MTTFTRVLVALVLSVSSASAFVPCPSALTKSNHRAIHDPAPAATTAVAPR
PRYQQHAGPLLMGWGDALGKAFANEDMAPKKNPGLKNAPNTCMVTVNGKT
IQAVQGQRLRDVVLAAKAKIEYGCEKGDCGTCESIVDGRKIRICKAIVPR
NKTKVNIKTKFG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR0360102Fe-2S_ferredoxin-like_sf
IPR0060582Fe2S_fd_BS
IPR0010412Fe-2S_ferredoxin-type
IPR012675Beta-grasp_dom_sf