prot_E-siliculosus-1a_F_contig13096.1880.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_E-siliculosus-1a_F_contig13096.1880.1
Unique Name	prot_E-siliculosus-1a_F_contig13096.1880.1
Type	polypeptide
Organism	Ectocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length	101

Homology

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BLAST of mRNA_E-siliculosus-1a_F_contig13096.1880.1 vs. uniprot
Match: D8LBS0_ECTSI (eIF-5a domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBS0_ECTSI)

HSP 1 Score: 207 bits (527), Expect = 1.610e-66
Identity = 101/101 (100.00%), Postives = 101/101 (100.00%), Query Frame = 0

Query:    1 NDYDFTGTDAGASHTIPSEAGQIRKGGYIVIKGHPCKVVNVSTSKTGKHGHAKANFTATDIFTGKKLEDVIPSTHTTSVPVVSRNEYQLLDISDDGFCSLL 101
            NDYDFTGTDAGASHTIPSEAGQIRKGGYIVIKGHPCKVVNVSTSKTGKHGHAKANFTATDIFTGKKLEDVIPSTHTTSVPVVSRNEYQLLDISDDGFCSLL
Sbjct:   46 NDYDFTGTDAGASHTIPSEAGQIRKGGYIVIKGHPCKVVNVSTSKTGKHGHAKANFTATDIFTGKKLEDVIPSTHTTSVPVVSRNEYQLLDISDDGFCSLL 146

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BLAST of mRNA_E-siliculosus-1a_F_contig13096.1880.1 vs. uniprot
Match: A0A6H5KDL5_9PHAE (eIF-5a domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDL5_9PHAE)

HSP 1 Score: 207 bits (527), Expect = 8.850e-66
Identity = 101/101 (100.00%), Postives = 101/101 (100.00%), Query Frame = 0

Query:    1 NDYDFTGTDAGASHTIPSEAGQIRKGGYIVIKGHPCKVVNVSTSKTGKHGHAKANFTATDIFTGKKLEDVIPSTHTTSVPVVSRNEYQLLDISDDGFCSLL 101
            NDYDFTGTDAGASHTIPSEAGQIRKGGYIVIKGHPCKVVNVSTSKTGKHGHAKANFTATDIFTGKKLEDVIPSTHTTSVPVVSRNEYQLLDISDDGFCSLL
Sbjct:  100 NDYDFTGTDAGASHTIPSEAGQIRKGGYIVIKGHPCKVVNVSTSKTGKHGHAKANFTATDIFTGKKLEDVIPSTHTTSVPVVSRNEYQLLDISDDGFCSLL 200

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BLAST of mRNA_E-siliculosus-1a_F_contig13096.1880.1 vs. uniprot
Match: A0A835Z7R2_9STRA (Eukaryotic translation initiation factor 5A n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7R2_9STRA)

HSP 1 Score: 172 bits (436), Expect = 4.090e-53
Identity = 82/101 (81.19%), Postives = 91/101 (90.10%), Query Frame = 0

Query:    1 NDYDFTGTDAGASHTIPSEAGQIRKGGYIVIKGHPCKVVNVSTSKTGKHGHAKANFTATDIFTGKKLEDVIPSTHTTSVPVVSRNEYQLLDISDDGFCSLL 101
            N+YDFT +DAGASHT P +AGQIRKGGYIVIKG PCKV NVSTSKTGKHGHAKANFTA DIFTGKKLED++P++H TSVP V+R +YQLLDISDDGF SLL
Sbjct:   12 NNYDFTSSDAGASHTFPMDAGQIRKGGYIVIKGRPCKVANVSTSKTGKHGHAKANFTAIDIFTGKKLEDIVPTSHATSVPNVARVDYQLLDISDDGFLSLL 112

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BLAST of mRNA_E-siliculosus-1a_F_contig13096.1880.1 vs. uniprot
Match: M4B4L4_HYAAE (Eukaryotic translation initiation factor 5A n=18 Tax=Peronosporaceae TaxID=4777 RepID=M4B4L4_HYAAE)

HSP 1 Score: 166 bits (420), Expect = 8.650e-51
Identity = 79/100 (79.00%), Postives = 87/100 (87.00%), Query Frame = 0

Query:    2 DYDFTGTDAGASHTIPSEAGQIRKGGYIVIKGHPCKVVNVSTSKTGKHGHAKANFTATDIFTGKKLEDVIPSTHTTSVPVVSRNEYQLLDISDDGFCSLL 101
            D+ F  TDAGAS T PSEAGQIRKGG+I+IKGHPCKVVN+STSKTGKHGHAK NFTA DIFT KK ED++PSTHTTSVP VSR EY LLDI+DD FCSL+
Sbjct:    7 DFTFHSTDAGASETYPSEAGQIRKGGFIMIKGHPCKVVNMSTSKTGKHGHAKCNFTALDIFTNKKYEDIVPSTHTTSVPFVSRAEYTLLDITDDDFCSLM 106

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BLAST of mRNA_E-siliculosus-1a_F_contig13096.1880.1 vs. uniprot
Match: K3WUI8_GLOUD (Eukaryotic translation initiation factor 5A n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WUI8_GLOUD)

HSP 1 Score: 165 bits (417), Expect = 2.400e-50
Identity = 79/101 (78.22%), Postives = 88/101 (87.13%), Query Frame = 0

Query:    1 NDYDFTGTDAGASHTIPSEAGQIRKGGYIVIKGHPCKVVNVSTSKTGKHGHAKANFTATDIFTGKKLEDVIPSTHTTSVPVVSRNEYQLLDISDDGFCSLL 101
            +DY F  TDAGAS T P EAGQIRKGG+I+IKGHPCKVV+VSTSKTGKHGHAK NFTA DIFT KKLED++PSTHTTSVP VSR+EY LLDI+DD F SL+
Sbjct:    3 DDYTFESTDAGASDTFPCEAGQIRKGGFIMIKGHPCKVVSVSTSKTGKHGHAKCNFTALDIFTNKKLEDIVPSTHTTSVPFVSRSEYTLLDITDDDFLSLM 103

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BLAST of mRNA_E-siliculosus-1a_F_contig13096.1880.1 vs. uniprot
Match: A0A6A3TKK1_9STRA (Eukaryotic translation initiation factor 5A n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3TKK1_9STRA)

HSP 1 Score: 165 bits (417), Expect = 4.470e-50
Identity = 79/101 (78.22%), Postives = 88/101 (87.13%), Query Frame = 0

Query:    1 NDYDFTGTDAGASHTIPSEAGQIRKGGYIVIKGHPCKVVNVSTSKTGKHGHAKANFTATDIFTGKKLEDVIPSTHTTSVPVVSRNEYQLLDISDDGFCSLL 101
            +D++F  TDAGAS T PSEAGQIRKGG+I+IKGHPCKVVNVSTSKTGKHGHAK NFTA DIFT KK ED++PSTHTTSVP VSR EY LLDI+DD F SL+
Sbjct:   24 HDFEFHSTDAGASETYPSEAGQIRKGGFIMIKGHPCKVVNVSTSKTGKHGHAKCNFTALDIFTNKKYEDIVPSTHTTSVPFVSRAEYTLLDITDDDFVSLM 124

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BLAST of mRNA_E-siliculosus-1a_F_contig13096.1880.1 vs. uniprot
Match: A0A8K1CGM3_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CGM3_PYTOL)

HSP 1 Score: 162 bits (411), Expect = 1.960e-49
Identity = 78/101 (77.23%), Postives = 86/101 (85.15%), Query Frame = 0

Query:    1 NDYDFTGTDAGASHTIPSEAGQIRKGGYIVIKGHPCKVVNVSTSKTGKHGHAKANFTATDIFTGKKLEDVIPSTHTTSVPVVSRNEYQLLDISDDGFCSLL 101
            +DY F  TDAGAS T P EAGQI+K G+I+IKGHPCKVVNVSTSKTGKHGHAK NFTA DIFT KKLED++PSTHTTSVP VSR EY LLDIS+D F SL+
Sbjct:    3 DDYTFESTDAGASETYPMEAGQIKKNGFIMIKGHPCKVVNVSTSKTGKHGHAKCNFTALDIFTNKKLEDIVPSTHTTSVPFVSRKEYTLLDISEDDFVSLM 103

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BLAST of mRNA_E-siliculosus-1a_F_contig13096.1880.1 vs. uniprot
Match: A0A5D6XTX1_9STRA (Eukaryotic translation initiation factor 5A n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XTX1_9STRA)

HSP 1 Score: 162 bits (409), Expect = 3.960e-49
Identity = 78/100 (78.00%), Postives = 86/100 (86.00%), Query Frame = 0

Query:    2 DYDFTGTDAGASHTIPSEAGQIRKGGYIVIKGHPCKVVNVSTSKTGKHGHAKANFTATDIFTGKKLEDVIPSTHTTSVPVVSRNEYQLLDISDDGFCSLL 101
            DY F  TDAGAS T P EAGQIRKGG+I+IKGHPCKVV+VSTSKTGKHGHAK NFTA DIFT KKLED++PSTHTTSVP V+R EY LLDISDD F +L+
Sbjct:    5 DYTFESTDAGASDTYPCEAGQIRKGGFIMIKGHPCKVVSVSTSKTGKHGHAKCNFTALDIFTNKKLEDIVPSTHTTSVPFVARAEYTLLDISDDDFVTLM 104

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BLAST of mRNA_E-siliculosus-1a_F_contig13096.1880.1 vs. uniprot
Match: W7U6Y6_9STRA (Eukaryotic translation initiation factor 5A n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U6Y6_9STRA)

HSP 1 Score: 162 bits (409), Expect = 4.340e-49
Identity = 80/100 (80.00%), Postives = 89/100 (89.00%), Query Frame = 0

Query:    2 DYDFTGTDAGASHTIPSEAGQIRKGGYIVIKGHPCKVVNVSTSKTGKHGHAKANFTATDIFTGKKLEDVIPSTHTTSVPVVSRNEYQLLDISDDGFCSLL 101
            DYDF+GT AGAS   PSEAGQI+KGGYI+IKG PCKVVNVSTSKTGKHGHAKANFTA DIF GKK+EDV+P+THTT VP V+R+EYQLLDI +DGF SLL
Sbjct:   11 DYDFSGTTAGASDVFPSEAGQIKKGGYIMIKGRPCKVVNVSTSKTGKHGHAKANFTAIDIFNGKKVEDVVPTTHTTYVPNVNRSEYQLLDI-EDGFVSLL 109

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BLAST of mRNA_E-siliculosus-1a_F_contig13096.1880.1 vs. uniprot
Match: A0A7S2UU65_9STRA (Eukaryotic translation initiation factor 5A n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UU65_9STRA)

HSP 1 Score: 161 bits (407), Expect = 9.030e-49
Identity = 79/101 (78.22%), Postives = 89/101 (88.12%), Query Frame = 0

Query:    1 NDYDFTGTDAGASHTIPSEAGQIRKGGYIVIKGHPCKVVNVSTSKTGKHGHAKANFTATDIFTGKKLEDVIPSTHTTSVPVVSRNEYQLLDISDDGFCSLL 101
            +D+ F   ++GAS TIP EAGQIRKGG+IVIKG PCKVVNVSTSKTGKHGHAKANFTA DIFTGKK ED++P+THTTSVP VSR EYQL+DISDDG+ SLL
Sbjct:    9 DDFHFDTGESGASLTIPMEAGQIRKGGHIVIKGKPCKVVNVSTSKTGKHGHAKANFTAIDIFTGKKYEDIVPTTHTTSVPNVSRAEYQLIDISDDGYLSLL 109

The following BLAST results are available for this feature:

BLAST of mRNA_E-siliculosus-1a_F_contig13096.1880.1 vs. uniprot

BLAST of mRNA_E-siliculosus-1a_F_contig13096.1880.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LBS0_ECTSI	1.610e-66	100.00	eIF-5a domain-containing protein n=1 Tax=Ectocarpu...	[more]
A0A6H5KDL5_9PHAE	8.850e-66	100.00	eIF-5a domain-containing protein n=1 Tax=Ectocarpu...	[more]
A0A835Z7R2_9STRA	4.090e-53	81.19	Eukaryotic translation initiation factor 5A n=2 Ta...	[more]
M4B4L4_HYAAE	8.650e-51	79.00	Eukaryotic translation initiation factor 5A n=18 T...	[more]
K3WUI8_GLOUD	2.400e-50	78.22	Eukaryotic translation initiation factor 5A n=1 Ta...	[more]
A0A6A3TKK1_9STRA	4.470e-50	78.22	Eukaryotic translation initiation factor 5A n=3 Ta...	[more]
A0A8K1CGM3_PYTOL	1.960e-49	77.23	Uncharacterized protein n=1 Tax=Pythium oligandrum...	[more]
A0A5D6XTX1_9STRA	3.960e-49	78.00	Eukaryotic translation initiation factor 5A n=1 Ta...	[more]
W7U6Y6_9STRA	4.340e-49	80.00	Eukaryotic translation initiation factor 5A n=2 Ta...	[more]
A0A7S2UU65_9STRA	9.030e-49	78.22	Eukaryotic translation initiation factor 5A n=1 Ta...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013185	Translation elongation factor, KOW-like	PFAM	PF08207	EFP_N	coord: 20..73 e-value: 7.8E-6 score: 25.8
IPR020189	Translation elongation factor, IF5A C-terminal	PFAM	PF01287	eIF-5a	coord: 81..101 e-value: 6.4E-6 score: 26.2
IPR014722	Ribosomal protein L2, domain 2	GENE3D	2.30.30.30		coord: 9..81 e-value: 2.0E-36 score: 125.6
IPR001884	Translation elongation factor IF5A-like	TIGRFAM	TIGR00037	TIGR00037	coord: 15..95 e-value: 7.1E-33 score: 111.2
IPR001884	Translation elongation factor IF5A-like	PANTHER	PTHR11673	TRANSLATION INITIATION FACTOR 5A-RELATED	coord: 5..101
None	No IPR available	PANTHER	PTHR11673:SF32	EUKARYOTIC TRANSLATION INITIATION FACTOR 5A-2	coord: 5..101
IPR019769	Translation elongation factor, IF5A, hypusine site	PROSITE	PS00302	IF5A_HYPUSINE	coord: 46..53
IPR008991	Translation protein SH3-like domain superfamily	SUPERFAMILY	50104	Translation proteins SH3-like domain	coord: 11..89

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E-siliculosus-1a_F_contig13096	contig	E-siliculosus-1a_F_contig13096:3..1222 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_E-siliculosus-1a_F_contig13096.1880.1	mRNA_E-siliculosus-1a_F_contig13096.1880.1	Ectocarpus siliculosus Ec863f_EcPH12_90f female	mRNA	E-siliculosus-1a_F_contig13096 3..1222 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_E-siliculosus-1a_F_contig13096.1880.1 ID=prot_E-siliculosus-1a_F_contig13096.1880.1|Name=mRNA_E-siliculosus-1a_F_contig13096.1880.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=101bp
NDYDFTGTDAGASHTIPSEAGQIRKGGYIVIKGHPCKVVNVSTSKTGKHG
HAKANFTATDIFTGKKLEDVIPSTHTTSVPVVSRNEYQLLDISDDGFCSL
L

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR008991	Translation_prot_SH3-like_sf
IPR019769	Trans_elong_IF5A_hypusine_site
IPR001884	IF5A-like
IPR014722	Rib_L2_dom2
IPR020189	Transl_elong_IF5A_C
IPR013185	Transl_elong_KOW-like