prot_E-siliculosus-1a_F_contig1304.1856.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1304.1856.1
Unique Nameprot_E-siliculosus-1a_F_contig1304.1856.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length374
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1304.1856.1 vs. uniprot
Match: A0A6H5KTI9_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTI9_9PHAE)

HSP 1 Score: 406 bits (1043), Expect = 4.830e-130
Identity = 328/383 (85.64%), Postives = 332/383 (86.68%), Query Frame = 0
Query:    1 MPLSWPLPSESPSYGAXXXXXXXXXXVGAQ-AVATLTAPVMPTTRQHSYRQXXXXXXXLLTENATDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---------GPAASFSVPGFFTPRRSLTRRRAPLSPGLSASPPPEARSLRSASASSIAGTPRRLSRGFRSASARGDSQLQVVMCSSCGRAGFIQSSEALSSRSAFFCSCGSPVVPASALQLLTATPGETSMSSVAQHTGASPQLVERLPTMQYQESSRKVLAAEHGEEDKVSCRVCLSDYETGDTLRILPCLHKFHRECIDEWLGRSVLCPLCNTSVEVAEDSHVTCCGSSSSXXXXXXXXXXXSTFSRG 373
            MPLSWPLP        XXXXXXXXXX     AV  LTA VM  TR +SYRQXXXXX  LL EN  DG       XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX         GPAASFS PGF TPRRSLTRRR PLSP LSASPP EARSLRSASASSIAGTPRRLSRGFRSASARGDSQLQVVMCSSCGRAGFIQSSEAL+SRS+FFCSCGSPVVPASALQLLTA PG  SMSSV+QHTGASPQLVERLPTMQYQESSRKVL AEHGEEDKVSCRVCLSDYE GDTLRILPCLHKFHR CIDEWLGRSVLCPLCNTSVEVAEDSHVTCCGSSSSXXXXXXXXXXXSTFSRG
Sbjct:  621 MPLSWPLPXXXXXXXXXXXXXXXXXXXXXXXAVTALTASVMTATRHYSYRQXXXXXRNLLAENTADGGRETAGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGPAASFSFPGFLTPRRSLTRRRTPLSPALSASPPAEARSLRSASASSIAGTPRRLSRGFRSASARGDSQLQVVMCSSCGRAGFIQSSEALASRSSFFCSCGSPVVPASALQLLTAMPGGISMSSVSQHTGASPQLVERLPTMQYQESSRKVLVAEHGEEDKVSCRVCLSDYEAGDTLRILPCLHKFHRVCIDEWLGRSVLCPLCNTSVEVAEDSHVTCCGSSSSXXXXXXXXXXXSTFSRG 1003          
BLAST of mRNA_E-siliculosus-1a_F_contig1304.1856.1 vs. uniprot
Match: A0A7S2Y0A3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y0A3_9STRA)

HSP 1 Score: 136 bits (342), Expect = 8.330e-35
Identity = 73/158 (46.20%), Postives = 99/158 (62.66%), Query Frame = 0
Query:  196 ARGDSQLQVVMCSSCGRAGFIQSSEALSSRSAFFCSCGSPVV---PASALQLLTATPGETSMSSVAQHTGASPQLVERLPTMQYQESSRKVLAAEHG---EEDKVSCRVCLSDYETGDTLRILPCLHKFHRECIDEWLGRSVLCPLCNTSVEVAEDSH 347
            A   + +QVVMC++CGR G +      S+ + F C CG+PV+   P   L L+T   G  ++  V  H GAS +LV  LPT+ ++   +    A+     ++DKVSCRVCLS+Y+ G+ LR+LPC HKFH+ CIDEWL RSV CPLCNTSV+ A   H
Sbjct:   37 AMNSTSVQVVMCTNCGRVGMLPHQ---STTAVFLCPCGTPVLAATPGQLLTLITRGGGLGALEGVHHHQGASKELVALLPTVTHRGDCKAAATAQEAFGEDDDKVSCRVCLSEYQDGECLRVLPCFHKFHKGCIDEWLERSVCCPLCNTSVDKALQQH 191          
BLAST of mRNA_E-siliculosus-1a_F_contig1304.1856.1 vs. uniprot
Match: A0A835ZD21_9STRA (FAD dependent oxidoreductase-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZD21_9STRA)

HSP 1 Score: 91.3 bits (225), Expect = 2.940e-16
Identity = 44/73 (60.27%), Postives = 52/73 (71.23%), Query Frame = 0
Query:  285 AAEHGEEDKVSCRVCLSDYETGDTLRILPCLHKFHRECIDEWL-GRSVLCPLCNTSVEVAEDSH--VTCCGSS 354
            A E  +EDK+SCRVCL +YE GD LRILPCLH++H  C+DEWL  RS  CPLCNTSV V    H  + C GS+
Sbjct:  259 AREEVDEDKISCRVCLCEYEAGDELRILPCLHRYHVHCVDEWLVKRSPACPLCNTSVAVVLHGHPGLRCTGSA 331          
BLAST of mRNA_E-siliculosus-1a_F_contig1304.1856.1 vs. uniprot
Match: L8HAL1_ACACA (Zinc finger (C3HC4type RING finger) family protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8HAL1_ACACA)

HSP 1 Score: 77.4 bits (189), Expect = 4.350e-14
Identity = 34/82 (41.46%), Postives = 51/82 (62.20%), Query Frame = 0
Query:  268 VERLPTMQYQESSRKVLAAEHGEEDK--VSCRVCLSDYETGDTLRILPCLHKFHRECIDEWLGRSVLCPLCNTSVEVAEDSH 347
            V++LPT  +  +  +    E GE D+   +C +CL +YE G+ L+ LPCLH +H+ECIDEWL  + LCP+C   V  A  ++
Sbjct:   13 VDQLPTHPFSSAQLRRTGGEGGELDEQLTTCTICLVEYEDGELLKTLPCLHSYHQECIDEWLSGNKLCPICKFDVTTAPSTY 94          
BLAST of mRNA_E-siliculosus-1a_F_contig1304.1856.1 vs. uniprot
Match: D7FJG1_ECTSI (RING-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJG1_ECTSI)

HSP 1 Score: 77.4 bits (189), Expect = 5.250e-13
Identity = 39/95 (41.05%), Postives = 54/95 (56.84%), Query Frame = 0
Query:  262 GASPQLVERLPTMQYQE-------------SSRKVLAAEHGEEDKVSCRVCLSDYETGDTLRILPCLHKFHRECIDEWLGRSVLCPLCNTSVEVA 343
            G   +LVERLP     E             +  +   AE  ++D ++CR+CLSDY+ GD +RILPC H+FH   ID+WL R+V CPLC+  +  A
Sbjct:   78 GLPRELVERLPVTVVTEEMCAKKKHQAVDANGEQAPKAEPIDDDSMTCRICLSDYQPGDKVRILPCFHRFHVSEIDDWLNRNVCCPLCHLDISKA 172          
BLAST of mRNA_E-siliculosus-1a_F_contig1304.1856.1 vs. uniprot
Match: A0A2L2Y4S9_PARTP (RING finger protein 38 (Fragment) n=2 Tax=Parasteatoda tepidariorum TaxID=114398 RepID=A0A2L2Y4S9_PARTP)

HSP 1 Score: 74.3 bits (181), Expect = 7.320e-13
Identity = 35/79 (44.30%), Postives = 47/79 (59.49%), Query Frame = 0
Query:  268 VERLPTMQYQESSRKVLAAEHGEEDKVS----CRVCLSDYETGDTLRILPCLHKFHRECIDEWLGRSVLCPLCNTSVEV 342
            + RLPT QY  ++    ++      +      C+VCLSDYE GDTLRILPC H+FH  CID WL  +  CP+C   V++
Sbjct:   25 INRLPTRQYIAANNNAGSSNELPHKRAGLNKECQVCLSDYENGDTLRILPCFHEFHTPCIDPWLKINHTCPVCRVVVDL 103          
BLAST of mRNA_E-siliculosus-1a_F_contig1304.1856.1 vs. uniprot
Match: A0A7S0QVM1_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0QVM1_9CHLO)

HSP 1 Score: 74.3 bits (181), Expect = 1.110e-12
Identity = 34/73 (46.58%), Postives = 44/73 (60.27%), Query Frame = 0
Query:  264 SPQLVERLPTMQYQESSRKVLAAEHGEEDKVSCRVCLSDYETGDTLRILPCLHKFHRECIDEWLGRSVLCPLC 336
            +P  V+ +P ++Y+        AE GEE    C +CL D+  GD LR LPC H FH  CIDEWLGR  +CP+C
Sbjct:   45 TPSEVKAIPVVEYE-------GAEEGEEGAELCTICLDDFAKGDQLRRLPCRHHFHVTCIDEWLGRRSMCPVC 110          
BLAST of mRNA_E-siliculosus-1a_F_contig1304.1856.1 vs. uniprot
Match: A0A7J7PSY4_9CHLO (RING-type domain-containing protein n=1 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7PSY4_9CHLO)

HSP 1 Score: 73.2 bits (178), Expect = 2.800e-12
Identity = 36/87 (41.38%), Postives = 48/87 (55.17%), Query Frame = 0
Query:  256 SVAQHTGASPQLVERLPTMQYQESSRKVLAAEHGEEDKVSCRVCLSDYETGDTLRILPCLHKFHRECIDEWLGRSVLCPLCNTSVEV 342
            +V    GA+   ++ LPT           A E     K+SC VCL ++  G  LR LPCLHKFH+ CID WLG+   CP+CN  V++
Sbjct:   38 TVENRKGAAAGTIDSLPTQAVPPGGLLGAAGE-----KLSCAVCLEEFVEGAELRALPCLHKFHKGCIDRWLGQKACCPVCNREVKL 119          
BLAST of mRNA_E-siliculosus-1a_F_contig1304.1856.1 vs. uniprot
Match: A0A7J7JST6_BUGNE (RING-type domain-containing protein n=1 Tax=Bugula neritina TaxID=10212 RepID=A0A7J7JST6_BUGNE)

HSP 1 Score: 73.9 bits (180), Expect = 3.250e-12
Identity = 39/107 (36.45%), Postives = 56/107 (52.34%), Query Frame = 0
Query:  238 PASALQLLTATPGETSMSSVAQHTGASPQLVERLPT-MQYQESSRKVLAAEHGEEDKVSCRVCLSDYETGDTLRILPCLHKFHRECIDEWLGRSVLCPLCNTSVEVA 343
            P   +Q   +   E     +AQ  G    L++ LPT + Y +SS+K             C +C+ D+E GD +R LPCLH +H++CID+WL RS  CP C   V+ A
Sbjct:   53 PTPGIQRTASQLSEDDQVKIAQRIG----LIQHLPTGLYYNDSSKKTR----------ECAICMLDFEVGDLMRFLPCLHAYHKDCIDDWLMRSFTCPSCMEPVDAA 145          
BLAST of mRNA_E-siliculosus-1a_F_contig1304.1856.1 vs. uniprot
Match: A0A7S2BFF5_9DINO (Hypothetical protein n=1 Tax=Alexandrium andersonii TaxID=327968 RepID=A0A7S2BFF5_9DINO)

HSP 1 Score: 76.6 bits (187), Expect = 4.140e-12
Identity = 34/81 (41.98%), Postives = 52/81 (64.20%), Query Frame = 0
Query:  262 GASPQLVERLPTMQYQESSRKVLAAEHGEEDKVSCRVCLSDYETGDTLRILPCLHKFHRECIDEWLGRSVLCPLCNTSVEV 342
            GA+ +L++++P +++        A +     + SC VCLS++E GD +R LPC H FHR CID+WL R+ +CPLC   +EV
Sbjct:  207 GATQELIDKMPLLEF--------AGDVAGSPETSCAVCLSEFERGDMMRQLPCGHNFHRACIDKWLKRNKVCPLCLQDIEV 279          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1304.1856.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KTI9_9PHAE4.830e-13085.64RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A7S2Y0A3_9STRA8.330e-3546.20Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A835ZD21_9STRA2.940e-1660.27FAD dependent oxidoreductase-domain-containing pro... [more]
L8HAL1_ACACA4.350e-1441.46Zinc finger (C3HC4type RING finger) family protein... [more]
D7FJG1_ECTSI5.250e-1341.05RING-type domain-containing protein n=2 Tax=Ectoca... [more]
A0A2L2Y4S9_PARTP7.320e-1344.30RING finger protein 38 (Fragment) n=2 Tax=Parastea... [more]
A0A7S0QVM1_9CHLO1.110e-1246.58Hypothetical protein (Fragment) n=1 Tax=Pyramimona... [more]
A0A7J7PSY4_9CHLO2.800e-1241.38RING-type domain-containing protein n=1 Tax=Scened... [more]
A0A7J7JST6_BUGNE3.250e-1236.45RING-type domain-containing protein n=1 Tax=Bugula... [more]
A0A7S2BFF5_9DINO4.140e-1241.98Hypothetical protein n=1 Tax=Alexandrium andersoni... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 296..336
e-value: 1.8E-8
score: 44.1
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 295..337
e-value: 1.4E-12
score: 47.8
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 296..337
score: 12.475
IPR011016Zinc finger, RING-CH-typeSMARTSM00744ringv_2coord: 295..337
e-value: 0.0025
score: 12.4
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 250..343
e-value: 2.8E-20
score: 73.7
NoneNo IPR availablePANTHERPTHR46913FAMILY NOT NAMEDcoord: 253..361
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 285..342

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1304contigE-siliculosus-1a_F_contig1304:24251..28356 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1304.1856.1mRNA_E-siliculosus-1a_F_contig1304.1856.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1304 22911..28356 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1304.1856.1 ID=prot_E-siliculosus-1a_F_contig1304.1856.1|Name=mRNA_E-siliculosus-1a_F_contig1304.1856.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=374bp
MPLSWPLPSESPSYGAGGGGGGGAPAVGAQAVATLTAPVMPTTRQHSYRQ
QQRQRRNLLTENATDGGRETAGSRRASSFRGGGGGATFSGVDEDTSDENA
AEPAPVAPPSPPPPPSHAGGGGGGEGAAAAAAGPAASFSVPGFFTPRRSL
TRRRAPLSPGLSASPPPEARSLRSASASSIAGTPRRLSRGFRSASARGDS
QLQVVMCSSCGRAGFIQSSEALSSRSAFFCSCGSPVVPASALQLLTATPG
ETSMSSVAQHTGASPQLVERLPTMQYQESSRKVLAAEHGEEDKVSCRVCL
SDYETGDTLRILPCLHKFHRECIDEWLGRSVLCPLCNTSVEVAEDSHVTC
CGSSSSSETSETSASAASTFSRG*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD
IPR011016Znf_RING-CH
IPR001841Znf_RING