prot_E-siliculosus-1a_F_contig1303.1850.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1303.1850.1
Unique Nameprot_E-siliculosus-1a_F_contig1303.1850.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length228
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig1303.1850.1 vs. uniprot
Match: A0A6H5L0C1_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L0C1_9PHAE)

HSP 1 Score: 375 bits (964), Expect = 1.900e-130
Identity = 208/226 (92.04%), Postives = 217/226 (96.02%), Query Frame = 0 
Query:    2 MALAALHSRGLQACSRVALRAAIAPRTQQLSPAAGAAGARRLLSSPAPTGAPSPTAAAKGQSQLHRGKKAEGEDRRLWPYLKAARQQFFNVILATLSIVMAVKMVEGKGARVALEEEMVELQRRQGVLLRSLSDEAWAEDVAKRVGAAGGKEAVMAEMEKVVAASLLDKETAELEAMRAAALKTSLEQQKHGAPYPGGVGSFANEQPREASASPVAPKPAPSKGMM 227
            M L AL SRGLQACS VA+RAAIAP+TQQL+PA G AGARRLLSSPAPTGAPSPTAAAKGQSQLHRGKKAEGE+RRLWPYLKAARQQFFNVILATLSIVMAVKMVEGKGARVALEEEMVELQR+QGVLLRSLSDEAWAEDVAKR+GAAGGKEAVM E+EKVVAASLLDKETAELEAMRAAALKTSLEQQKHGAPYPGGVG+F +EQPREASASPVA KPAPSKGMM
Sbjct:    1 MVLTALRSRGLQACSHVAMRAAIAPQTQQLAPAEGVAGARRLLSSPAPTGAPSPTAAAKGQSQLHRGKKAEGEERRLWPYLKAARQQFFNVILATLSIVMAVKMVEGKGARVALEEEMVELQRQQGVLLRSLSDEAWAEDVAKRIGAAGGKEAVMVEIEKVVAASLLDKETAELEAMRAAALKTSLEQQKHGAPYPGGVGAFDDEQPREASASPVARKPAPSKGMM 226
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1303.1850.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5L0C1_9PHAE1.900e-13092.04Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 105..125
NoneNo IPR availableCOILSCoilCoilcoord: 170..190
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..227

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1303contigE-siliculosus-1a_F_contig1303:19251..24234 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1303.1850.1mRNA_E-siliculosus-1a_F_contig1303.1850.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1303 19143..25052 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1303.1850.1 ID=prot_E-siliculosus-1a_F_contig1303.1850.1|Name=mRNA_E-siliculosus-1a_F_contig1303.1850.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=228bp
MMALAALHSRGLQACSRVALRAAIAPRTQQLSPAAGAAGARRLLSSPAPT
GAPSPTAAAKGQSQLHRGKKAEGEDRRLWPYLKAARQQFFNVILATLSIV
MAVKMVEGKGARVALEEEMVELQRRQGVLLRSLSDEAWAEDVAKRVGAAG
GKEAVMAEMEKVVAASLLDKETAELEAMRAAALKTSLEQQKHGAPYPGGV
GSFANEQPREASASPVAPKPAPSKGMM*
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