prot_E-siliculosus-1a_F_contig1291.1778.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1291.1778.1
Unique Nameprot_E-siliculosus-1a_F_contig1291.1778.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length126
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1291.1778.1 vs. uniprot
Match: D7FR01_ECTSI (PC4 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FR01_ECTSI)

HSP 1 Score: 157 bits (397), Expect = 2.740e-47
Identity = 76/77 (98.70%), Postives = 77/77 (100.00%), Query Frame = 0
Query:   49 KKQSDGSGVSNKIELGNKKFVDVREFKGKIYVDIREYYEKDGEMRPGKKGISLSTEHWEVLKQNMDDINAKVEELSG 125
            KKQSDGSGVSNKIELGNKKFVDVREFKGKIYVDIREYYEKDGEMRPGKKGISLSTEHWEVLK+NMDDINAKVEELSG
Sbjct:   52 KKQSDGSGVSNKIELGNKKFVDVREFKGKIYVDIREYYEKDGEMRPGKKGISLSTEHWEVLKENMDDINAKVEELSG 128          
BLAST of mRNA_E-siliculosus-1a_F_contig1291.1778.1 vs. uniprot
Match: A0A6F9DUN4_9ASCI (Activated RNA polymerase II transcriptional coactivator p15 n=1 Tax=Phallusia mammillata TaxID=59560 RepID=A0A6F9DUN4_9ASCI)

HSP 1 Score: 95.5 bits (236), Expect = 6.580e-23
Identity = 46/74 (62.16%), Postives = 58/74 (78.38%), Query Frame = 0
Query:   51 QSDGSGVSN-KIELGNKKFVDVREFKGKIYVDIREYYEKDGEMRPGKKGISLSTEHWEVLKQNMDDINAKVEEL 123
            Q + SG S+ KI LG  KFV VREFKGKI +DIRE+YE +GEM+PGKKGISL  E W+ LKQ++DDI+ K+ +L
Sbjct:   49 QPNSSGGSDEKISLGKMKFVSVREFKGKILIDIREFYENNGEMKPGKKGISLQAEQWQKLKQSIDDIDEKIHQL 122          
BLAST of mRNA_E-siliculosus-1a_F_contig1291.1778.1 vs. uniprot
Match: F6ZYN8_CIOIN (Activated RNA polymerase II transcriptional coactivator p15 n=2 Tax=Ciona intestinalis TaxID=7719 RepID=F6ZYN8_CIOIN)

HSP 1 Score: 92.8 bits (229), Expect = 7.330e-22
Identity = 39/70 (55.71%), Postives = 56/70 (80.00%), Query Frame = 0
Query:   54 GSGVSNKIELGNKKFVDVREFKGKIYVDIREYYEKDGEMRPGKKGISLSTEHWEVLKQNMDDINAKVEEL 123
            G   + KI LG  KF+DVR FK KI +DIRE+Y+KDGE++PGKKGISLSTE WE LK +M+++++++++ 
Sbjct:   53 GGNSNEKIHLGKMKFIDVRTFKDKILIDIREHYQKDGEIKPGKKGISLSTEQWEKLKMSMEEVDSRIQQF 122          
BLAST of mRNA_E-siliculosus-1a_F_contig1291.1778.1 vs. uniprot
Match: A0A6P4Z2T7_BRABE (Activated RNA polymerase II transcriptional coactivator p15 n=2 Tax=Branchiostoma TaxID=7737 RepID=A0A6P4Z2T7_BRABE)

HSP 1 Score: 92.0 bits (227), Expect = 1.120e-21
Identity = 41/77 (53.25%), Postives = 60/77 (77.92%), Query Frame = 0
Query:   49 KKQSDGSGVSNKIELGNKKFVDVREFKGKIYVDIREYYEKDGEMRPGKKGISLSTEHWEVLKQNMDDINAKVEELSG 125
            +++ +GS +   I+L NK++V VREFKGK  +DIREYY+  GE++PGKKGISL+T+ W  LK++MDDI+ K+ +L G
Sbjct:   39 REEDEGSDM---IQLSNKRYVSVREFKGKCLIDIREYYDAGGELKPGKKGISLTTDQWRRLKESMDDIDEKITDLVG 112          
BLAST of mRNA_E-siliculosus-1a_F_contig1291.1778.1 vs. uniprot
Match: H2ZF47_CIOSA (Activated RNA polymerase II transcriptional coactivator p15 n=1 Tax=Ciona savignyi TaxID=51511 RepID=H2ZF47_CIOSA)

HSP 1 Score: 91.3 bits (225), Expect = 3.370e-21
Identity = 38/66 (57.58%), Postives = 56/66 (84.85%), Query Frame = 0
Query:   58 SNKIELGNKKFVDVREFKGKIYVDIREYYEKDGEMRPGKKGISLSTEHWEVLKQNMDDINAKVEEL 123
            + KI LG  KFVDVR F GK+ +DIRE+Y+KDGE++PG+KGISLSTE WE LK +M+++++++++L
Sbjct:   62 NEKILLGKMKFVDVRTFNGKVLIDIREHYQKDGEIKPGRKGISLSTEQWEKLKMSMEEVDSRIQQL 127          
BLAST of mRNA_E-siliculosus-1a_F_contig1291.1778.1 vs. uniprot
Match: A0A8J9ZGZ9_BRALA (SUB1 protein n=2 Tax=Branchiostoma TaxID=7737 RepID=A0A8J9ZGZ9_BRALA)

HSP 1 Score: 90.5 bits (223), Expect = 4.620e-21
Identity = 38/68 (55.88%), Postives = 54/68 (79.41%), Query Frame = 0
Query:   58 SNKIELGNKKFVDVREFKGKIYVDIREYYEKDGEMRPGKKGISLSTEHWEVLKQNMDDINAKVEELSG 125
            S+ I+L NK+F+ VREFKGK  +DIREYY+ DGE++PG+KGISLS + W+ LK  M+DI+ K++ + G
Sbjct:   46 SDMIQLSNKRFISVREFKGKCLIDIREYYDADGELKPGRKGISLSKDQWQKLKAAMEDIDEKIQAIEG 113          
BLAST of mRNA_E-siliculosus-1a_F_contig1291.1778.1 vs. uniprot
Match: UPI0016041207 (activated RNA polymerase II transcriptional coactivator p15-like isoform X2 n=1 Tax=Branchiostoma floridae TaxID=7739 RepID=UPI0016041207)

HSP 1 Score: 90.1 bits (222), Expect = 6.550e-21
Identity = 39/68 (57.35%), Postives = 54/68 (79.41%), Query Frame = 0
Query:   58 SNKIELGNKKFVDVREFKGKIYVDIREYYEKDGEMRPGKKGISLSTEHWEVLKQNMDDINAKVEELSG 125
            S+ I+L NK++V VREFKGK  +DIREYY+  GE++PGKKGISL+T+ W  LK+ +DDI+ K+ +L G
Sbjct:   46 SDMIQLSNKRYVSVREFKGKCLIDIREYYDAGGELKPGKKGISLTTDQWRRLKEAVDDIDEKIADLDG 113          
BLAST of mRNA_E-siliculosus-1a_F_contig1291.1778.1 vs. uniprot
Match: UPI00193952E2 (activated RNA polymerase II transcriptional coactivator p15-like n=1 Tax=Styela clava TaxID=7725 RepID=UPI00193952E2)

HSP 1 Score: 90.5 bits (223), Expect = 6.580e-21
Identity = 41/74 (55.41%), Postives = 56/74 (75.68%), Query Frame = 0
Query:   50 KQSDGSGVSNKIELGNKKFVDVREFKGKIYVDIREYYEKDGEMRPGKKGISLSTEHWEVLKQNMDDINAKVEEL 123
            +Q DG+    K+ +G  KFV VREFK KIYVDIRE+YEKDGE+ PG+KG+SL  E W+ LK  +DDI+ K++++
Sbjct:   53 RQQDGN-KEEKLSIGKMKFVTVREFKNKIYVDIREHYEKDGELLPGRKGVSLPAEQWQNLKSLIDDIDEKIQQM 125          
BLAST of mRNA_E-siliculosus-1a_F_contig1291.1778.1 vs. uniprot
Match: C3ZA15_BRAFL (Activated RNA polymerase II transcriptional coactivator p15 (Fragment) n=1 Tax=Branchiostoma floridae TaxID=7739 RepID=C3ZA15_BRAFL)

HSP 1 Score: 88.2 bits (217), Expect = 1.010e-20
Identity = 37/65 (56.92%), Postives = 52/65 (80.00%), Query Frame = 0
Query:   61 IELGNKKFVDVREFKGKIYVDIREYYEKDGEMRPGKKGISLSTEHWEVLKQNMDDINAKVEELSG 125
            ++L NK++V VREFKGK  +DIREYY+  GE++PGKKGISL+T+ W  LK+ +DDI+ K+ +L G
Sbjct:    1 LQLSNKRYVSVREFKGKCLIDIREYYDAGGELKPGKKGISLTTDQWRRLKEAVDDIDEKIADLDG 65          
BLAST of mRNA_E-siliculosus-1a_F_contig1291.1778.1 vs. uniprot
Match: A0A8J9ZET2_BRALA (SUB1 protein n=1 Tax=Branchiostoma lanceolatum TaxID=7740 RepID=A0A8J9ZET2_BRALA)

HSP 1 Score: 88.6 bits (218), Expect = 1.100e-20
Identity = 36/65 (55.38%), Postives = 52/65 (80.00%), Query Frame = 0
Query:   61 IELGNKKFVDVREFKGKIYVDIREYYEKDGEMRPGKKGISLSTEHWEVLKQNMDDINAKVEELSG 125
            ++L NK+F+ VREFKGK  +DIREYY+ DGE++PG+KGISLS + W+ LK  M+DI+ K++ + G
Sbjct:   17 LQLSNKRFISVREFKGKCLIDIREYYDADGELKPGRKGISLSKDQWQKLKAAMEDIDEKIQAIEG 81          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1291.1778.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FR01_ECTSI2.740e-4798.70PC4 domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A6F9DUN4_9ASCI6.580e-2362.16Activated RNA polymerase II transcriptional coacti... [more]
F6ZYN8_CIOIN7.330e-2255.71Activated RNA polymerase II transcriptional coacti... [more]
A0A6P4Z2T7_BRABE1.120e-2153.25Activated RNA polymerase II transcriptional coacti... [more]
H2ZF47_CIOSA3.370e-2157.58Activated RNA polymerase II transcriptional coacti... [more]
A0A8J9ZGZ9_BRALA4.620e-2155.88SUB1 protein n=2 Tax=Branchiostoma TaxID=7737 RepI... [more]
UPI00160412076.550e-2157.35activated RNA polymerase II transcriptional coacti... [more]
UPI00193952E26.580e-2155.41activated RNA polymerase II transcriptional coacti... [more]
C3ZA15_BRAFL1.010e-2056.92Activated RNA polymerase II transcriptional coacti... [more]
A0A8J9ZET2_BRALA1.100e-2055.38SUB1 protein n=1 Tax=Branchiostoma lanceolatum Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009044ssDNA-binding transcriptional regulatorGENE3D2.30.31.10coord: 60..123
e-value: 2.5E-28
score: 99.3
IPR009044ssDNA-binding transcriptional regulatorSUPERFAMILY54447ssDNA-binding transcriptional regulator domaincoord: 61..123
IPR003173Transcriptional coactivator p15 (PC4)PFAMPF02229PC4coord: 62..111
e-value: 2.0E-25
score: 88.2
NoneNo IPR availablePANTHERPTHR13215RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATORcoord: 15..123
NoneNo IPR availablePANTHERPTHR13215:SF0ACTIVATED RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR P15coord: 15..123

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1291contigE-siliculosus-1a_F_contig1291:31439..34241 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1291.1778.1mRNA_E-siliculosus-1a_F_contig1291.1778.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1291 31439..34241 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1291.1778.1 ID=prot_E-siliculosus-1a_F_contig1291.1778.1|Name=mRNA_E-siliculosus-1a_F_contig1291.1778.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=126bp
MEGSGGGEEEEERGATTTDDGETEKKSSANTGAAAGSSSGSSSSSKKAKK
QSDGSGVSNKIELGNKKFVDVREFKGKIYVDIREYYEKDGEMRPGKKGIS
LSTEHWEVLKQNMDDINAKVEELSG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003173PC4
IPR009044ssDNA-bd_transcriptional_reg