prot_E-siliculosus-1a_F_contig1291.1775.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1291.1775.1
Unique Nameprot_E-siliculosus-1a_F_contig1291.1775.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length232
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig1291.1775.1 vs. uniprot
Match: D7FR04_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR04_ECTSI)

HSP 1 Score: 262 bits (670), Expect = 1.310e-83
Identity = 141/159 (88.68%), Postives = 146/159 (91.82%), Query Frame = 0 
Query:   31 MRIRVPDSSSSSSGSELSDGGDSPVATTPEAFTDSDNDSSFESEYDEEAATTCGSNSGMLMEAVCSNSNSSRWPECTADMGNSHEGHHRPQQQQQQLEAPRPLRKVRFTLGGRESAKAAAPSCWGKEQRAVIQENALRSLGMLRSTESGALLAQQRRRW 189
            MRIRVPD+SSSS GSELSDGGDSPVATTPEAFTDSDNDSSF SEY+EEAA TCGSNSGMLMEA+C      RWPECTADMG+SHEGHHRPQQQQ+QLEAPRPLRKVRFTLGGRESAKAAAPSCWGKEQRAVIQENALRSLGMLR  ES A LAQQRRRW
Sbjct:    1 MRIRVPDTSSSS-GSELSDGGDSPVATTPEAFTDSDNDSSFGSEYEEEAAATCGSNSGMLMEAMC------RWPECTADMGSSHEGHHRPQQQQKQLEAPRPLRKVRFTLGGRESAKAAAPSCWGKEQRAVIQENALRSLGMLRPAESAAPLAQQRRRW 152
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1291.1775.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FR04_ECTSI1.310e-8388.68Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..7
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 20..24
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 25..232
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 8..19

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1291contigE-siliculosus-1a_F_contig1291:2076..5915 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1291.1775.1mRNA_E-siliculosus-1a_F_contig1291.1775.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1291 2076..5915 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1291.1775.1 ID=prot_E-siliculosus-1a_F_contig1291.1775.1|Name=mRNA_E-siliculosus-1a_F_contig1291.1775.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=232bp
MSSLRSSSSSSSTLCCAVLSTASQEPPLSPMRIRVPDSSSSSSGSELSDG
GDSPVATTPEAFTDSDNDSSFESEYDEEAATTCGSNSGMLMEAVCSNSNS
SRWPECTADMGNSHEGHHRPQQQQQQLEAPRPLRKVRFTLGGRESAKAAA
PSCWGKEQRAVIQENALRSLGMLRSTESGALLAQQRRRWQRKQKSSSSRS
SSGSAARAASKNRSLAPAPFKSTSANTSSTAV
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