prot_E-siliculosus-1a_F_contig1286.1749.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1286.1749.1
Unique Nameprot_E-siliculosus-1a_F_contig1286.1749.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length384
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig1286.1749.1 vs. uniprot
Match: D7G367_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G367_ECTSI)

HSP 1 Score: 631 bits (1627), Expect = 3.130e-226
Identity = 334/386 (86.53%), Postives = 345/386 (89.38%), Query Frame = 0 
Query:    1 MRNLALHTLAILGLGVMPLRRCDGFCAISSVLKLSNPPSMTMLGKASTIQGVPRCRRQRAGGLPGCE-GPSLFTSRSFAYPP-VAAQDSTPRRCTARMCMGSHTAVGMVDTRAWSVRSGPRVFWCRRGLARVGMGTVRVWMFSARGRALTTQISHQP-VHNVISGVLGELANIRTPAALLGGAALGTMFFQPKPDANRRLHLLYTLLSTSAFSLQLVCVLCSTLTYTSIASRPEAMAISAISYLSEQMQWEFFVIRGSFVYGLFSFLAALACRGWLTFYEEKERGPAWVIMAVLASSAVFLLNFIHYTHNSLTLCLGGMTKALISLTLRNMYATKKRFFRHVLAAFGIWGAVKLLKLGPSEGAERSTEQGTAVSTAPPPESGRARK 383
            MR+LALHTLAILGLGVMPL RCDGF AISSVLKLSNPPSM MLGK STIQGVPRCRRQRAGGLPGCE G S F S SF YPP VAA DSTP+ CT RMC+GSH AVGM DTRAWSV S PR  W  RGL  VGMG V   +    GRA+TTQIS  P  HNVISGVLGELANIRTPAALLGGAALGTMF QPKPDAN+RLHLLYTLLSTSAFSLQLVCVLCSTLTYTSIASRPEAMAISAISYLSEQMQWEFFVIRGSFVYGLFSFLAALACRGWLTFYEEKERGPAWVIMAVLASSA+FLLNFIHYT NSLTLCLGGMTKALISLTLRNMY TKKRFFRHVLAAFGIWGAVKLLKLGPS+GA+RS E+GTAVSTAPPP+SGR RK
Sbjct:    1 MRSLALHTLAILGLGVMPLGRCDGFSAISSVLKLSNPPSMIMLGKTSTIQGVPRCRRQRAGGLPGCEEGSSFFPSTSFPYPPAVAAPDSTPQSCTTRMCLGSHNAVGMQDTRAWSVCSIPRALWYCRGLVYVGMGNVPS-LDVLFGRAITTQISRHPDEHNVISGVLGELANIRTPAALLGGAALGTMFLQPKPDANKRLHLLYTLLSTSAFSLQLVCVLCSTLTYTSIASRPEAMAISAISYLSEQMQWEFFVIRGSFVYGLFSFLAALACRGWLTFYEEKERGPAWVIMAVLASSAIFLLNFIHYTQNSLTLCLGGMTKALISLTLRNMYDTKKRFFRHVLAAFGIWGAVKLLKLGPSKGAKRSAEKGTAVSTAPPPQSGRERK 385
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BLAST of mRNA_E-siliculosus-1a_F_contig1286.1749.1 vs. uniprot
Match: A0A6H5JKS2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKS2_9PHAE)

HSP 1 Score: 546 bits (1407), Expect = 1.870e-193
Identity = 297/383 (77.55%), Postives = 309/383 (80.68%), Query Frame = 0 
Query:    1 MRNLALHTLAILGLGVMPLRRCDGFCAISSVLKLSNPPSMTMLGKASTIQGVPRCRRQRAGGLPGCEGPSLFTSRSFAYPPVAAQDSTPRRCTARMCMGSHTAVGMVDTRAWSVRSGPRVFWCRRGLARVGMGTVRVWMFSARGRALTTQISHQPVHNVISGVLGELANIRTPAALLGGAALGTMFFQPKPDANRRLHLLYTLLSTSAFSLQLVCVLCSTLTYTSIASRPEAMAISAISYLSEQMQWEFFVIRGSFVYGLFSFLAALACRGWLTFYEEKERGPAWVIMAVLASSAVFLLNFIHYTHNSLTLCLGGMTKALISLTLRNMYATKKRFFRHVLAAFGIWGAVKLLKLGPSEGAERSTEQGTAVSTAPPPESGRARK 383
            MRNLA HTLAILGLGVMPL RCDGF AIS+VLKLSNPPS+ MLGK S IQGVPRCRRQ   GLPGCE P            VAAQDSTPRRCTAR+CMGSHTA                    R     +G       +   RG A+         HNVI+GVLGELANIRTPAALLGGAALGTMFFQPK DANRRLHLLYTLLSTSAFSLQLVCVLCSTLTYTSIASRPEA+AISAISYLSEQMQWEFFVIRGSFVYGLFSFLAAL CRGWLTFYEEKERGPAWVIMAVLASSA+FLLNFIHYTHNSLTLCLGGMTKALISLTLRNMYATKKRF RHVLAAFGIWGAVKLLKL PS GA+RS EQGTAVSTAPPP+SGR +K
Sbjct:    1 MRNLAFHTLAILGLGVMPLGRCDGFSAISTVLKLSNPPSIIMLGKTSIIQGVPRCRRQWVRGLPGCEAP------------VAAQDSTPRRCTARVCMGSHTA--------------------RAAAGSLGTAAAAAVL---RGGAME--------HNVIAGVLGELANIRTPAALLGGAALGTMFFQPKADANRRLHLLYTLLSTSAFSLQLVCVLCSTLTYTSIASRPEAIAISAISYLSEQMQWEFFVIRGSFVYGLFSFLAALVCRGWLTFYEEKERGPAWVIMAVLASSAIFLLNFIHYTHNSLTLCLGGMTKALISLTLRNMYATKKRFIRHVLAAFGIWGAVKLLKLEPSAGAKRSAEQGTAVSTAPPPQSGREQK 340
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1286.1749.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G367_ECTSI3.130e-22686.53Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JKS2_9PHAE1.870e-19377.55Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012446Calcium release-activated calcium channel proteinPFAMPF07856Orai-1coord: 174..308
e-value: 5.8E-8
score: 32.6
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 188..198
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 199..223
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..22
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 330..383
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 250..273
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 224..249
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..14
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 274..284
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 23..169
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 170..187
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 285..302
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 303..307
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 308..329
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..24
score: 0.59
NoneNo IPR availableTMHMMTMhelixcoord: 249..268
NoneNo IPR availableTMHMMTMhelixcoord: 206..228
NoneNo IPR availableTMHMMTMhelixcoord: 283..302

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1286contigE-siliculosus-1a_F_contig1286:19430..25429 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1286.1749.1mRNA_E-siliculosus-1a_F_contig1286.1749.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1286 18573..25460 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1286.1749.1 ID=prot_E-siliculosus-1a_F_contig1286.1749.1|Name=mRNA_E-siliculosus-1a_F_contig1286.1749.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=384bp
MRNLALHTLAILGLGVMPLRRCDGFCAISSVLKLSNPPSMTMLGKASTIQ
GVPRCRRQRAGGLPGCEGPSLFTSRSFAYPPVAAQDSTPRRCTARMCMGS
HTAVGMVDTRAWSVRSGPRVFWCRRGLARVGMGTVRVWMFSARGRALTTQ
ISHQPVHNVISGVLGELANIRTPAALLGGAALGTMFFQPKPDANRRLHLL
YTLLSTSAFSLQLVCVLCSTLTYTSIASRPEAMAISAISYLSEQMQWEFF
VIRGSFVYGLFSFLAALACRGWLTFYEEKERGPAWVIMAVLASSAVFLLN
FIHYTHNSLTLCLGGMTKALISLTLRNMYATKKRFFRHVLAAFGIWGAVK
LLKLGPSEGAERSTEQGTAVSTAPPPESGRARK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012446CRAC_channel