prot_E-siliculosus-1a_F_contig1285.1743.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1285.1743.1
Unique Nameprot_E-siliculosus-1a_F_contig1285.1743.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length721
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1285.1743.1 vs. uniprot
Match: A0A6H5JDU3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDU3_9PHAE)

HSP 1 Score: 903 bits (2334), Expect = 0.000e+0
Identity = 495/657 (75.34%), Postives = 512/657 (77.93%), Query Frame = 0
Query:   64 MVELSEDPARHAHLSESIVSCFHAPGLPKSIGGAVDFSQFVSVMAHREQGRKFNTLQDELRSEGLAAAKAHFANIFRKEVVVRKLLDAGGTAGFMCSAFQMLFKAEGLAASSSDRIQKLRLLEETVKSKRSRKLEIKRAEQAKRKLLESSRSGSQNTRHLPARACLRPSFSPAPSCGDMVNAESLETASDGTGVVPQGAVKLRPELHPYSTSAAVRRAFLACRGRSSQCKENISGPNSSVQLKKKAVREATAVLALHHAPSPPSDGSPVTRTANAFRGRRWGIGSNGTGSSATVKKISTGHAAGGFVRYPSASVRRLRXXXXXXXXXAAGLPRWGRGNRGVVGSIVMEPADLESKGVRAFAVTSRRKDAILKRTPLCGRSAMARLPSWASCENSACDPGTTPPPPLRQDTASIASSAGEGVNSDRRGVMHELPMRSGVGGTDTVVGGDNTRGGGISSPPKAGEIDAAPLSATSFDEKEWRRAMSLGEGDWWEEHHPLFSPQFSCGLSAATTTMTHSVKTIATTIPTAMTREVSHDLLVKSRDIGSRVSSSSSISLEPARKTVHLDGGDAQEFHPAEEPVAGEVGRGLLLPKRPENPTLRAREGRRPNGCRFLRGRGXXXXXXKAAWPPPTPWRAPRLVRCMRRPDPTLGGVHLHNNG 720
            MVELSEDPARH HLS+SIVSCFHAPG+PKSIGGAVDFSQFVSVMAHREQG KFNTLQDELRSEGLAAAKAHFA+IFRKEVVVRKLLDAGGTAGFMCSAFQMLFKA GLA SSSDR QKLRLLEET KSKRSRKLE  RA+QAKRKL                                                                                           +SVQLK +AVREATAVL LHHAP PP DGSPVTRTAN FRGRRWG+GSNGTGSSA VKK + G AAGGFVRYPSASVRRLR         AAGLPRWGRGNRGVVGSIVMEP DL SKGVRAFAVTSRRKD ILKRTPLCGRSAMA LPSWASCENSACDPGT PPPPLRQDTASIASSAG+G NS RRG  HE  M SGV GTD VVGGDNT GG ISS PKAGEIDAAPLSATS DE+EWRRAMSLG  DWW+EHHPLFSPQFSCGLSAATTTMTHSVKTIATTIPTA TRE SHD LVKSRDI SRVSSSS+ISLEP+RKTVHLDG + QEFHPAEE VAG+VGRGLLLPKRPENPT+RAREGRRPNGCRFLRGRGXXXXXXKAAWPPPTPWRAPRLVRCMRRPDPTLGG HL+NNG
Sbjct:    1 MVELSEDPARHDHLSQSIVSCFHAPGVPKSIGGAVDFSQFVSVMAHREQGCKFNTLQDELRSEGLAAAKAHFADIFRKEVVVRKLLDAGGTAGFMCSAFQMLFKAGGLATSSSDRTQKLRLLEETDKSKRSRKLECTRAKQAKRKLF------------------------------------------------------------------------------------------ASVQLKNQAVREATAVLGLHHAPFPPMDGSPVTRTANTFRGRRWGVGSNGTGSSAAVKKFNIGLAAGGFVRYPSASVRRLRRHRRQRLPPAAGLPRWGRGNRGVVGSIVMEPTDLGSKGVRAFAVTSRRKDTILKRTPLCGRSAMATLPSWASCENSACDPGTGPPPPLRQDTASIASSAGQGDNSYRRGEAHEFLMHSGVRGTDAVVGGDNTLGGAISSLPKAGEIDAAPLSATSLDEEEWRRAMSLGGEDWWKEHHPLFSPQFSCGLSAATTTMTHSVKTIATTIPTATTREASHDPLVKSRDICSRVSSSSTISLEPSRKTVHLDGSNVQEFHPAEESVAGKVGRGLLLPKRPENPTVRAREGRRPNGCRFLRGRGXXXXXXKAAWPPPTPWRAPRLVRCMRRPDPTLGGGHLYNNG 567          
BLAST of mRNA_E-siliculosus-1a_F_contig1285.1743.1 vs. uniprot
Match: D7FNU6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNU6_ECTSI)

HSP 1 Score: 691 bits (1783), Expect = 5.930e-243
Identity = 403/573 (70.33%), Postives = 409/573 (71.38%), Query Frame = 0
Query:   94 IGGAVDFSQFVSVMAHR-----EQGRKFNTLQDELRSEGLAAAKAHFANIFRKEVVVRKLLDAGGTAGFMCSAFQMLFKAEGLAASSSDRIQKLRLLEETVKSKRSRKLEIKRAEQAKRKLLESSRSGSQNTRHLPARACLRPSFSPAPSCGDMVNAESLETASDGTGVVPQGAVKLRPELHPYSTSAAVRRAFLACRGRSSQCKENISGPNSSVQLKKKAVREATAVLALHHAPSPPSDGSPVTRTANAFRGRRWGIGSNGTGSSATVKKISTGHAAGGFVRYPSASVRRLRXXXXXXXXXAAGLPRWGRGNRGVVGSIVMEPADLESKGVRAFAVTSRRKDAILKRTPLCGRSAMARLPSWASCENSACDPGTTPPPPLRQDTASIASSAGEGVNSDRRGVMHELPMRSGVGGTDTVVGGDNTRGGGISSPPKAGEIDAAPLSATSFDEKEWRRAMSLGEGDWWEEHHPLFSPQFSCGLSAATTTMTHSVKTIATTIPTAMTREVSHDLLVKSRDIGSRVSSSSSISLEPARKTVHLDGGDAQEFHPAEEPVAGEVGRGLLLPKRPENPTL 661
            IG  + F    S   HR     EQGRKFNTLQDELRSEGLAAAKAHFANIFRKEVVVRKLLDAGGTAGFMCSAFQMLFKAEGLAASSSDRIQKLRLLEETVKSK+SRKLE KRAEQAKRKLLES                                                                                          VQLKK+AVREATAVL LHHAPSPPS GSPVTRTANAFRGRR                                    LR XXX     A GLPRWGRGNRGVVG IVMEP DLESKGVRAFAVTSRRKDAILKRTPLCGRSAMARLPSWASCENSACDPGTTPPPPLRQDTASIASSAGE VNSDRRGVMHELPMRSGVGGTDTVV GDNTRGGGISSPPKA EIDAAPLSATS +EKEWRRAMSLGE DWWEEHHPLFS Q SCGLSAATT MTHSVKTIATTIPTAMTREVSHD LVKSRDIGSRVSSS SISLEPARKTVHLD GDAQEFHPAEEPVAG+VGRGLLLPKRPENPT+
Sbjct:    7 IGMGIAFFGLFSWTHHRYCCLQEQGRKFNTLQDELRSEGLAAAKAHFANIFRKEVVVRKLLDAGGTAGFMCSAFQMLFKAEGLAASSSDRIQKLRLLEETVKSKQSRKLECKRAEQAKRKLLES------------------------------------------------------------------------------------------VQLKKQAVREATAVLGLHHAPSPPSVGSPVTRTANAFRGRR------------------------------------LRRXXXQHPPPATGLPRWGRGNRGVVGRIVMEPTDLESKGVRAFAVTSRRKDAILKRTPLCGRSAMARLPSWASCENSACDPGTTPPPPLRQDTASIASSAGESVNSDRRGVMHELPMRSGVGGTDTVVVGDNTRGGGISSPPKAREIDAAPLSATSLEEKEWRRAMSLGEEDWWEEHHPLFSQQLSCGLSAATT-MTHSVKTIATTIPTAMTREVSHDPLVKSRDIGSRVSSSGSISLEPARKTVHLDSGDAQEFHPAEEPVAGDVGRGLLLPKRPENPTV 452          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1285.1743.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JDU3_9PHAE0.000e+075.34Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FNU6_ECTSI5.930e-24370.33Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1285contigE-siliculosus-1a_F_contig1285:27195..31421 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1285.1743.1mRNA_E-siliculosus-1a_F_contig1285.1743.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1285 26836..31421 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1285.1743.1 ID=prot_E-siliculosus-1a_F_contig1285.1743.1|Name=mRNA_E-siliculosus-1a_F_contig1285.1743.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=721bp
MSLIEGFEVQKWIRERGRTREAEVIVANKGSDDRWIDLQLIFNHLDAQRR
GKISHSAVRNALSMVELSEDPARHAHLSESIVSCFHAPGLPKSIGGAVDF
SQFVSVMAHREQGRKFNTLQDELRSEGLAAAKAHFANIFRKEVVVRKLLD
AGGTAGFMCSAFQMLFKAEGLAASSSDRIQKLRLLEETVKSKRSRKLEIK
RAEQAKRKLLESSRSGSQNTRHLPARACLRPSFSPAPSCGDMVNAESLET
ASDGTGVVPQGAVKLRPELHPYSTSAAVRRAFLACRGRSSQCKENISGPN
SSVQLKKKAVREATAVLALHHAPSPPSDGSPVTRTANAFRGRRWGIGSNG
TGSSATVKKISTGHAAGGFVRYPSASVRRLRRRRRQRPPPAAGLPRWGRG
NRGVVGSIVMEPADLESKGVRAFAVTSRRKDAILKRTPLCGRSAMARLPS
WASCENSACDPGTTPPPPLRQDTASIASSAGEGVNSDRRGVMHELPMRSG
VGGTDTVVGGDNTRGGGISSPPKAGEIDAAPLSATSFDEKEWRRAMSLGE
GDWWEEHHPLFSPQFSCGLSAATTTMTHSVKTIATTIPTAMTREVSHDLL
VKSRDIGSRVSSSSSISLEPARKTVHLDGGDAQEFHPAEEPVAGEVGRGL
LLPKRPENPTLRAREGRRPNGCRFLRGRGGGGGGAKAAWPPPTPWRAPRL
VRCMRRPDPTLGGVHLHNNG*
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