prot_E-siliculosus-1a_F_contig1285.1742.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1285.1742.1
Unique Nameprot_E-siliculosus-1a_F_contig1285.1742.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length1273
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1285.1742.1 vs. uniprot
Match: D7FNU7_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNU7_ECTSI)

HSP 1 Score: 2140 bits (5546), Expect = 0.000e+0
Identity = 1141/1280 (89.14%), Postives = 1165/1280 (91.02%), Query Frame = 0
Query:    1 MMRLVGLDACPGVTSLDVSWNALTELDSACLEGCKELWIVDASHNRLESLGGLSRVMALGYLNLSSNFIPLDGLRPLARAHILELFLGSGRSSKERRRTLCVLPNLWVLDDEFVTAEERRIADDNHQHNGRGGGGTSDHLLPTWNQPSPKRGKTRDKNGSTAIASPSSIVVVKDAGRQHPPQNQEESACKSGFVDLETQGHLTQEFYENVVWKIPSRAVILFTRSPACPELVAWQTSPMDQRVYDQMEPLLARAKLSHDDLHPTSVSFGGEGHGDHRRDGLGGGSVVPSRHRSPRTPCFHFDPLPADDDRGDRGGVYATQLADSVNSLPPPDAGFWRANIRRPRSGERVQVLCDTWSVIVTVDPEAFLVTVAPFEGIQTSAYGGEARIDSRDLYYDPRGWWSHVPAIAGNATAGPSRLHRQSRGLSASGLPRGAGSLNEALEEGDGDEPSQILNGRPSGGDREVVVDSSRNYTDLLLPSAAQQQSPPASPAAAPVSENLSPAVSTEPSTARGLTASSNAAAAPSNPSPAPSVLRSHRCPNNNVVDVFSAEGSWDPVFVVAPPRLVGLQNQTAARRMGGRRARQVAWYRIDGPEVSVAPRPTMPRCSSLTTPFRVGDTPSRQLQQSASTSSIPRLSSKHAPLRLAAVAPSYGGGSSVYARFSQSRGLSVPSINTNSCSTPAPEKLPTAADEAWLELQREMGSLKADNRMLVRDSSRGGXXXXXXXSGECINTSTIFASSPAMSVVTKSLAENSTVGAQATTDMLAKTLTQTLDSPPSAWKGGNPVSATATVFELTEVDGRPEKDAGEGASSPTSASLAHETTRSTGNWRVDNQQQEVSPPEECSKQVRMGEGDKPDTAASSHRXXXIPDXGNSTAASATTRKWKPNAFRPLEWFPVPGRQVFLVDPNDAKAAPAAEPVGRPVESDTSNTSNVPPEGRGAEGXXXXXXXN--------CSSSESRQAVGGEGTVEQDKARTRGGQAKDKRGIDSGKGQPGSGSPSTRSPFPTAAVLNNSLLSPAINRDTGVRPRIWTRSRRARSSRSLHSAGALRALAGQKSIGLLADALRPKSPDSLGVITSFSTQVRLEIDPDDVRSRGFHRREEEHLRETRQYVEASDVASGLAVTPSVRPMVSGSTGRRTALTKAVVPHWRHDKRHPARRLPQCQRLTISGWEGAEDAGSPSVDLGRLPTFKPSESLELESSCRNLGAVRDKGGRGASPSGGILKSSFARGNRGGVRVKARPESPHHSDSGLDECFSISSAATSNNNSCCGWRKSDSM 1272
            M RLVGLDACP VTSLDVSWNALTELDSACLE CKELWIVDASHNRLESLGGLSRVMALGYLNLSSNFIPLDGLRPL+RAHILELFLGSGRSSKERRRTLCVLPNLWVLDDEFVTAEERRIADDNHQHNGRG G TSDHLLPTWNQ SPKR KTRDKN STAIASPSSIVVVKDAGR HPPQ Q+ESACKSGFVDLETQGHLTQ+FYENVVWKIPSRAVILFTRSPACPELVAWQTSPMDQ  YDQMEPLLARAKLSHDDLHPTSVSFGGE  GDHRRDGLGGGSVVPSRHRSPRTPCFHFDPLPADDDRGDRGGV+ATQLADSV+SLP PDAGFWRA+IRRPRSGERVQVLCDTWSVIVTVDPEAFLVTVAPFEGIQTSAY GEARIDSRDLYYDPRGWWSHVPAIAGNATAGPSRLHRQSRGLSASGLPRGAGSLNEALEEG GDEPSQILNGRPSGGDREVVVDSSRNYTDLLLPSAAQQ S PAS AAAPVS++LSPAVSTEPS                      SVLRSHRCPNNNVVDVFSAEGSWDPVFVVAPPRLVGLQNQTAARRMGGRRARQVAWYRIDGPEVSVAPRPTMPRCSSL  PFRVGDTPSR LQQSASTSS+PRLSSK APLRLAAVAPS+GGG+SVYARFSQSRGLSVPSINTNSCS PA +KLPTAADEAWLELQREMGSLKADNRML+RDSS+G XXXXX    ECINTSTI ASSPAMSVVTKSLAENSTVGAQATTDMLAKTLT+TLDSP SAWKGGN VSATATVFELT+V GRPEKDAGE ASSPTS SL HETTRST NWRVDNQQQEVSPPEECSKQVR+ EGDKPDTAASSHRXXX P X NSTAASATTRKWKPNAFRPLEWFPVPGRQVF VDPND  AAPAAEPVGRPVES TSNT NVPPEG+GAEGXXXXXXX         C SSE RQAVGGE TVEQDKA  RGGQAK+K  I+SGKGQPG+GSPSTRSPFPTAAVLNN LLSPA NRD GVRP IWTRSRRARSSRSLHSAGA RAL  QK  GLLADALRPKSPDSLGVITSFSTQVRLEIDP DVRSRGFHRREEEH RETRQ VEASDV+SGLAVTP VRPMVSG TG+R A TKAVVPHW+HDKRHPARR PQCQRLTISGWEGAE AGS S DL RLPTFKPSES ELESSCRNLGAV DKGG GA PSGGILKSS ARG RGG RVKARP SPHHSDSGLDECFSISSAATSNNNSCCGWRKSDSM
Sbjct:    1 MTRLVGLDACPSVTSLDVSWNALTELDSACLEECKELWIVDASHNRLESLGGLSRVMALGYLNLSSNFIPLDGLRPLSRAHILELFLGSGRSSKERRRTLCVLPNLWVLDDEFVTAEERRIADDNHQHNGRGWGATSDHLLPTWNQSSPKRDKTRDKNSSTAIASPSSIVVVKDAGRHHPPQKQKESACKSGFVDLETQGHLTQDFYENVVWKIPSRAVILFTRSPACPELVAWQTSPMDQPAYDQMEPLLARAKLSHDDLHPTSVSFGGEVDGDHRRDGLGGGSVVPSRHRSPRTPCFHFDPLPADDDRGDRGGVHATQLADSVDSLPLPDAGFWRASIRRPRSGERVQVLCDTWSVIVTVDPEAFLVTVAPFEGIQTSAYRGEARIDSRDLYYDPRGWWSHVPAIAGNATAGPSRLHRQSRGLSASGLPRGAGSLNEALEEGKGDEPSQILNGRPSGGDREVVVDSSRNYTDLLLPSAAQQLSQPASSAAAPVSKSLSPAVSTEPSXXXXXXXXXXXXXXXXXXXXXXSVLRSHRCPNNNVVDVFSAEGSWDPVFVVAPPRLVGLQNQTAARRMGGRRARQVAWYRIDGPEVSVAPRPTMPRCSSLRMPFRVGDTPSRHLQQSASTSSVPRLSSKQAPLRLAAVAPSHGGGNSVYARFSQSRGLSVPSINTNSCSMPAAKKLPTAADEAWLELQREMGSLKADNRMLIRDSSQGXXXXXX----ECINTSTISASSPAMSVVTKSLAENSTVGAQATTDMLAKTLTRTLDSPLSAWKGGNTVSATATVFELTQVGGRPEKDAGECASSPTSVSLTHETTRSTDNWRVDNQQQEVSPPEECSKQVRVAEGDKPDTAASSHRXXXXPXXXNSTAASATTRKWKPNAFRPLEWFPVPGRQVFRVDPNDVNAAPAAEPVGRPVESGTSNTPNVPPEGQGAEGXXXXXXXXXXXXXXXXCGSSE-RQAVGGEDTVEQDKAGRRGGQAKEKIRIESGKGQPGNGSPSTRSPFPTAAVLNNGLLSPATNRDMGVRPTIWTRSRRARSSRSLHSAGAFRALDRQKPNGLLADALRPKSPDSLGVITSFSTQVRLEIDPHDVRSRGFHRREEEHCRETRQCVEASDVSSGLAVTPGVRPMVSGPTGQRPARTKAVVPHWQHDKRHPARRQPQCQRLTISGWEGAEGAGSTSGDLMRLPTFKPSESPELESSCRNLGAVSDKGGPGAPPSGGILKSSLARGKRGGARVKARPASPHHSDSGLDECFSISSAATSNNNSCCGWRKSDSM 1275          
BLAST of mRNA_E-siliculosus-1a_F_contig1285.1742.1 vs. uniprot
Match: A0A6H5J9X4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9X4_9PHAE)

HSP 1 Score: 2053 bits (5320), Expect = 0.000e+0
Identity = 1113/1369 (81.30%), Postives = 1147/1369 (83.78%), Query Frame = 0
Query:    1 MMRLVGLDACPGVTSLDVSWNALTELDSACLEGCKELWIVDASHNRLESLGGLSRVMALGYLNLSSNFIPLDGLRPLARAHILELFLGSGRSSKERRRTLCVLPNLWVLDDEFVTAEERRIADDNHQHNGRGGGGTSDHLLPTWNQPSPKRGKTRDKNGSTAIASPSSIVVVKDAGRQHPPQNQEESACKSGFVDLETQGHLTQEFYENVVWKIPSR--------------------------------------------------------------------------AVILFTRSPACPELVAWQTSPMDQRVYDQMEPLLARAKLSHDDLHPTSV-----------------------SFGGEGHGDHRRDGLGGGSVVPSRHRSPRTPCFHFDPLPADDDRGDRGGVYATQLADSVNSLPPPDAGFWRANIRRPRSGERVQVLCDTWSVIVTVDPEAFLVTVAPFEGIQTSAYGGEARIDSRDLYYDPRGWWSHVPAIAGNATAGPSRLHRQSRGLSASGLPRGAGSLNEALEEGDGDEPSQILNGRPSGGDREVVVDSSRNYTDLLLPSAAQQQSPPASPAAAPVSENLSPAVSTEPSTARGLTASSNAAAAPSNPSPAPSVLRSHRCPNNNVVDVFSAEGSWDPVFVVAPPRLVGLQNQTAARRMGGRRARQVAWYRIDGPEVSVAPRPTMPRCSSLTTPFRVGDTPSRQLQQSASTSSIPRLSSKHAPLRLAAVAPSYGGGSSVYARFSQSRGLSVPSINTNSCSTPAPEKLPTAADEAWLELQREMGSLKADNRMLVRDSSRGGXXXXXXXSGECINTSTIFASSPAMSVVTKSLAENSTVGAQATTDMLAKTLTQTLDSPPSAWKGGNPVSATATVFELTEVDGRPEKDAGEGASSPTSASLAHETTRSTGNWRVDNQQQEVSPPEECSKQVRMGEGDKPDTAASSHRXXXIPDXGNSTAASATTRKWKPNAFRPLEWFPVPGRQVFLVDPNDAKAAPAAEPVGRPVESDTSNTSNVPPEGRGAEGXXXXXXXNCSSSESRQAVGGEGTVEQDKARTRGGQAKDKRGIDSGKGQPGSGSPSTRSPFPTAAVLNNSLLSPAINRDTGVRPRIWTRSRRARSSRSLHSAGALRALAGQKSIGLLADALRPKSPDSLGVITSFSTQVRLEIDPDDVRSRGFHRREEEHLRETRQYVEASDVASGLAVTPSVRPMVSGSTGRRTALTKAVVPHWRHDKRHPARRLPQCQRLTISGWEGAEDAGSPSVDLGRLPTFKPSESLELESSCRNLGAVRDKGGRGASPSGGILKSSFARGNRGGVRVKARPESPHHSDSGLDECFSISSAATSNNNSCCGWRKSDSM 1272
            M RLVGLDACPGVTSLDVSWNALTELDSACLEGCKELWIVDASHNRLESLGGLSRVMALGYLNLSSNFIPLDGLRPLARAHILEL LGSGRSS+ERRRTLC LPNLWVLDDEFVTAEERRIADD+HQHNG GGG TSDHLLPTWNQPSPKR KTRDK+GSTAIASPSSIVVVKD GR HP Q Q+ SA KSGFVDLETQGHLTQ+FYENVVWKIPSR                                                                          AVILFTRSPACPELVAW+TSPMDQR YDQMEPLLARAKLSHDDLHPTSV                       SFGGE HGDHRRDGLG GSVVPSRHRSPRTPCFH DPLPADDD GDRGGV ATQ A SV+S  PPDAGFWRANIRRPRSGERVQVLC TWSVIVTVDPEAFLVTVAPFE IQ+SAY G+ RIDSRDLYYDPRGWW HVPA+AGNATAGPSRLHRQSRGLSASGLPRGAGSLNEALEEGDGDEPSQILNGRPSGGDREV+VDSSRNYT                  +APVSEN SPAVSTEPSTA GLTASSNAAAAPSN SP PSVLR H CP NNVVDVFSAEGSWDPVFVVAPPRLVGLQNQTAA RMGGRRARQVAWY IDG EVSVAPRPTMPRC+SLT PFRVGDTP RQLQQSASTSSIPRLSSKHA LRLAAV PS+GG +SVYARFSQSRGLSVPSINT+SCS PA EK+PT+ADEAWLELQREMGSLKADNRMLVRDSSRGGXXXXXX SGECINTSTI ASSPAMSVVTKSLAENSTVGAQATT+MLAKTLT+TLDSP SAWKGGNPVSATATVFELT+VDGRPEKDAGEGASSP+SASLAHETTRST  WRVDNQQQEVSPPE+CSKQVRMGEGDKPD  ASSHR   IPD GNSTAASATTRKWKPNA RPLEWFPVPG+QVFLVDPND  AAPAAEPVGRPVESDTSNTSNVPPE +GAE   XXXXXNC SSESR AVGGE  VEQD A  RGGQ  +KR IDSGKG+ G GSPSTRSPFPTAAVLNNSLLSPA NRDTGV PRIWTRSRRARSS+SL SAGAL A+ G KS GLLADALRP+SP SLGV+TS STQVRLEIDPDD RSRGFHRREE H RETRQ VEASDV SGLAVTP VRPMVSGSTG+R A TKAV PHWRHDK  PARRLPQCQRLTISG EGA+DAGS S DLGRLPTF PSES ELESSCRNLGAVRDK  RGA PSG ILKSSFARGNRGGVRVKARP SPHH DSGLDE  SISSAATSNNNSCCGW+KSDSM
Sbjct:    1 MTRLVGLDACPGVTSLDVSWNALTELDSACLEGCKELWIVDASHNRLESLGGLSRVMALGYLNLSSNFIPLDGLRPLARAHILELSLGSGRSSEERRRTLCALPNLWVLDDEFVTAEERRIADDSHQHNGSGGGATSDHLLPTWNQPSPKRDKTRDKDGSTAIASPSSIVVVKDVGRHHPSQKQKASAYKSGFVDLETQGHLTQDFYENVVWKIPSRQQRDLLEALPPIITGIDVDHVFESWEDSSGHARGSNQEGEAAWGADDEAGATGLGSIEANVPPRGIGLTRLCRRAVILFTRSPACPELVAWKTSPMDQRAYDQMEPLLARAKLSHDDLHPTSVVAIGAIGTFPGFPIATLCSLPSQSFGGEVHGDHRRDGLGWGSVVPSRHRSPRTPCFHLDPLPADDDSGDRGGVCATQQAASVDSSSPPDAGFWRANIRRPRSGERVQVLCGTWSVIVTVDPEAFLVTVAPFESIQSSAYRGDVRIDSRDLYYDPRGWWCHVPALAGNATAGPSRLHRQSRGLSASGLPRGAGSLNEALEEGDGDEPSQILNGRPSGGDREVIVDSSRNYTG-----------------SAPVSENFSPAVSTEPSTANGLTASSNAAAAPSNLSPTPSVLRIHLCPKNNVVDVFSAEGSWDPVFVVAPPRLVGLQNQTAALRMGGRRARQVAWYHIDGSEVSVAPRPTMPRCTSLTMPFRVGDTPPRQLQQSASTSSIPRLSSKHAHLRLAAVVPSHGGDNSVYARFSQSRGLSVPSINTSSCSRPAAEKVPTSADEAWLELQREMGSLKADNRMLVRDSSRGGXXXXXX-SGECINTSTISASSPAMSVVTKSLAENSTVGAQATTNMLAKTLTRTLDSPLSAWKGGNPVSATATVFELTQVDGRPEKDAGEGASSPSSASLAHETTRSTDIWRVDNQQQEVSPPEDCSKQVRMGEGDKPDATASSHRRRRIPDDGNSTAASATTRKWKPNASRPLEWFPVPGKQVFLVDPNDVMAAPAAEPVGRPVESDTSNTSNVPPEDQGAE---XXXXXNCGSSESRHAVGGEDAVEQDPAGKRGGQVNEKRRIDSGKGKTGGGSPSTRSPFPTAAVLNNSLLSPATNRDTGVTPRIWTRSRRARSSQSLRSAGALGAIGGHKSNGLLADALRPESPGSLGVMTSSSTQVRLEIDPDDERSRGFHRREEGHRRETRQCVEASDVGSGLAVTPGVRPMVSGSTGQRPARTKAVAPHWRHDKTQPARRLPQCQRLTISGLEGAKDAGSTSGDLGRLPTFSPSESPELESSCRNLGAVRDKSCRGAPPSGRILKSSFARGNRGGVRVKARPASPHHLDSGLDERLSISSAATSNNNSCCGWQKSDSM 1348          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1285.1742.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FNU7_ECTSI0.000e+089.14Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
A0A6H5J9X4_9PHAE0.000e+081.30Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 2..131
e-value: 1.1E-12
score: 49.2
NoneNo IPR availablePANTHERPTHR18849LEUCINE RICH REPEAT PROTEINcoord: 6..163
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 6..117

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1285contigE-siliculosus-1a_F_contig1285:18620..26781 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1285.1742.1mRNA_E-siliculosus-1a_F_contig1285.1742.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1285 18620..26781 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1285.1742.1 ID=prot_E-siliculosus-1a_F_contig1285.1742.1|Name=mRNA_E-siliculosus-1a_F_contig1285.1742.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=1273bp
MMRLVGLDACPGVTSLDVSWNALTELDSACLEGCKELWIVDASHNRLESL
GGLSRVMALGYLNLSSNFIPLDGLRPLARAHILELFLGSGRSSKERRRTL
CVLPNLWVLDDEFVTAEERRIADDNHQHNGRGGGGTSDHLLPTWNQPSPK
RGKTRDKNGSTAIASPSSIVVVKDAGRQHPPQNQEESACKSGFVDLETQG
HLTQEFYENVVWKIPSRAVILFTRSPACPELVAWQTSPMDQRVYDQMEPL
LARAKLSHDDLHPTSVSFGGEGHGDHRRDGLGGGSVVPSRHRSPRTPCFH
FDPLPADDDRGDRGGVYATQLADSVNSLPPPDAGFWRANIRRPRSGERVQ
VLCDTWSVIVTVDPEAFLVTVAPFEGIQTSAYGGEARIDSRDLYYDPRGW
WSHVPAIAGNATAGPSRLHRQSRGLSASGLPRGAGSLNEALEEGDGDEPS
QILNGRPSGGDREVVVDSSRNYTDLLLPSAAQQQSPPASPAAAPVSENLS
PAVSTEPSTARGLTASSNAAAAPSNPSPAPSVLRSHRCPNNNVVDVFSAE
GSWDPVFVVAPPRLVGLQNQTAARRMGGRRARQVAWYRIDGPEVSVAPRP
TMPRCSSLTTPFRVGDTPSRQLQQSASTSSIPRLSSKHAPLRLAAVAPSY
GGGSSVYARFSQSRGLSVPSINTNSCSTPAPEKLPTAADEAWLELQREMG
SLKADNRMLVRDSSRGGGGGGGGGSGECINTSTIFASSPAMSVVTKSLAE
NSTVGAQATTDMLAKTLTQTLDSPPSAWKGGNPVSATATVFELTEVDGRP
EKDAGEGASSPTSASLAHETTRSTGNWRVDNQQQEVSPPEECSKQVRMGE
GDKPDTAASSHRRRRIPDDGNSTAASATTRKWKPNAFRPLEWFPVPGRQV
FLVDPNDAKAAPAAEPVGRPVESDTSNTSNVPPEGRGAEGGGGGDGGNCS
SSESRQAVGGEGTVEQDKARTRGGQAKDKRGIDSGKGQPGSGSPSTRSPF
PTAAVLNNSLLSPAINRDTGVRPRIWTRSRRARSSRSLHSAGALRALAGQ
KSIGLLADALRPKSPDSLGVITSFSTQVRLEIDPDDVRSRGFHRREEEHL
RETRQYVEASDVASGLAVTPSVRPMVSGSTGRRTALTKAVVPHWRHDKRH
PARRLPQCQRLTISGWEGAEDAGSPSVDLGRLPTFKPSESLELESSCRNL
GAVRDKGGRGASPSGGILKSSFARGNRGGVRVKARPESPHHSDSGLDECF
SISSAATSNNNSCCGWRKSDSM*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf