prot_E-siliculosus-1a_F_contig128.1709.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig128.1709.1
Unique Nameprot_E-siliculosus-1a_F_contig128.1709.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length96
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig128.1709.1 vs. uniprot
Match: D8LTS8_ECTSI (FoP_duplication domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTS8_ECTSI)

HSP 1 Score: 108 bits (270), Expect = 3.670e-27
Identity = 66/95 (69.47%), Postives = 67/95 (70.53%), Query Frame = 0 
Query:    2 KEFTVEELDQQMDNYFQRD-DKEGGDADSGGKGRGRKGRGPPATAEKLDSAMDSYWGNGKAAEAAPEGDEKENNDVAAMEGQDEEAPAADSAGGN 95
            KEFTVEELDQQMDNYFQRD DKEGGDADS                          WGNGKAAEAAPEGDEK N+DVAAMEGQDEEAPAADSAGGN
Sbjct:  153 KEFTVEELDQQMDNYFQRDEDKEGGDADSXXXXXXXXXXXXXXXXXXXXXXXXXXWGNGKAAEAAPEGDEKGNDDVAAMEGQDEEAPAADSAGGN 247
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BLAST of mRNA_E-siliculosus-1a_F_contig128.1709.1 vs. uniprot
Match: A0A6H5KIZ9_9PHAE (FoP_duplication domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIZ9_9PHAE)

HSP 1 Score: 102 bits (254), Expect = 4.830e-25
Identity = 63/95 (66.32%), Postives = 64/95 (67.37%), Query Frame = 0 
Query:    1 MKEFTVEELDQQMDNYFQRDDKEGGDADSGGKGRGRKGRGPPATAEKLDSAMDSYWGNGKAAEAAPEGDEKENNDVAAMEGQDEEAPAADSAGGN 95
            MKEFTVEELDQQMDNYFQRDDKEG                               WGNGKAAEAAPEG+EKENNDVAAMEGQDEEAPAADSAGGN
Sbjct:  127 MKEFTVEELDQQMDNYFQRDDKEGXXXXXXXXXXXXXXX--XXXXXXXXXXXXXXWGNGKAAEAAPEGNEKENNDVAAMEGQDEEAPAADSAGGN 219
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig128.1709.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LTS8_ECTSI3.670e-2769.47FoP_duplication domain-containing protein n=1 Tax=... [more]
A0A6H5KIZ9_9PHAE4.830e-2566.32FoP_duplication domain-containing protein n=1 Tax=... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR025715Chromatin target of PRMT1 protein, C-terminalPFAMPF13865FoP_duplicationcoord: 22..60
e-value: 1.0E-7
score: 32.4

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig128contigE-siliculosus-1a_F_contig128:27513..29136 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig128.1709.1mRNA_E-siliculosus-1a_F_contig128.1709.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig128 27396..29185 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig128.1709.1 ID=prot_E-siliculosus-1a_F_contig128.1709.1|Name=mRNA_E-siliculosus-1a_F_contig128.1709.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=96bp
MKEFTVEELDQQMDNYFQRDDKEGGDADSGGKGRGRKGRGPPATAEKLDS
AMDSYWGNGKAAEAAPEGDEKENNDVAAMEGQDEEAPAADSAGGN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR025715FoP_C