prot_E-siliculosus-1a_F_contig1270.1663.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1270.1663.1
Unique Nameprot_E-siliculosus-1a_F_contig1270.1663.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length83
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig1270.1663.1 vs. uniprot
Match: D7FGW1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGW1_ECTSI)

HSP 1 Score: 124 bits (311), Expect = 1.730e-35
Identity = 71/86 (82.56%), Postives = 74/86 (86.05%), Query Frame = 0 
Query:    1 MGRRKPGKILKMTPG--TKKEAMQRKMKPGLRRSYFTAYHSFLMTAKRALGRCDRQETLEQAVEASLKDCEARER-GGPSEQPDRP 83
            M RRKPGKILKMTPG   KK+ + RKMKPGLRRSYFTA HSF MTAKRALG  DRQETL QAV+ASLKDCEARER GGPSEQPDRP
Sbjct:    1 MRRRKPGKILKMTPGEKAKKDVLLRKMKPGLRRSYFTACHSFYMTAKRALGPHDRQETLAQAVDASLKDCEAREREGGPSEQPDRP 86
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1270.1663.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FGW1_ECTSI1.730e-3582.56Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..49
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 45..49
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 34..44
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..33
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 50..83

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1270contigE-siliculosus-1a_F_contig1270:33760..34715 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1270.1663.1mRNA_E-siliculosus-1a_F_contig1270.1663.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1270 33760..34715 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1270.1663.1 ID=prot_E-siliculosus-1a_F_contig1270.1663.1|Name=mRNA_E-siliculosus-1a_F_contig1270.1663.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=83bp
MGRRKPGKILKMTPGTKKEAMQRKMKPGLRRSYFTAYHSFLMTAKRALGR
CDRQETLEQAVEASLKDCEARERGGPSEQPDRP
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