prot_E-siliculosus-1a_F_contig1266.1637.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1266.1637.1
Unique Nameprot_E-siliculosus-1a_F_contig1266.1637.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length500
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig1266.1637.1 vs. uniprot
Match: D7G7D8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7D8_ECTSI)

HSP 1 Score: 610 bits (1573), Expect = 1.350e-216
Identity = 327/499 (65.53%), Postives = 335/499 (67.13%), Query Frame = 0 
Query:    1 MPPTRPLSTPCRYGYNCTRPDCFYVHPKDMNKDRPKDERPLCTFGSGCFRKVCHNDHPNGRIMDQLRASIDYCSSWMLVRPHELVRVSAAFKEAFPAPNDGKDRCDFVAAVPVRVAYNDWKRYRGISATGTPDGVPSNPQQIQLYPRTRKGERLLQDAQNRVGMRWSPTPYRPWKTLERMATHDQHWESNQDHYLLCAGYEAFPPGSGVYMELSVTDMMKVEDAGDGQRAGARVAREVLGLPGANGQKWFVFHVSRPDEETNEEAFNITIRAIVDTSKMPAVPRRPEPSRAPQLAQPPVPPPPSTGRPGAVPAPPASFNAQQXXXXXXXXXXQPFAAPANFAGPSPXXXXXXXXXXXXNASSASNSPAEGQKQLPGSVSFNHGGPAAKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPQQPPENTVDELSDLLSSLNMAKFRSAFDRQNVDLKALKMMTAESELSGIAIPLGPRIKLMKELGIARGR 499
            MPPTRPLSTPCRYGYNCTRPDCFY HPKDM+KDRPKDERPLCTFGSG      HNDHPNGRIMDQLRASIDYCSSWMLVRPHELVRVSAAF+ AFPAPNDGKDRCDFVAAVPVR+AYNDW+RYRGIS TGTPDGVPSNPQQIQLYPRTRKGERLLQD QNRVGMRWSPTPYRPWKTLERMATHDQ+WESNQDHYLLCAGYEAFPPGSGVY+ELSVTDMMK EDAGDGQRAGARVAREVLGLPGANGQKWFVFHVSRPDE  +EEAFNITIRAIVDTSKMP VPR  EP RAPQLAQPPV                                                                          LP                                                         PP +TV               RSAFDRQNVDLKALKMMTAESELSGIAIPLGPRIKLMKELGIARGR
Sbjct:    1 MPPTRPLSTPCRYGYNCTRPDCFYAHPKDMHKDRPKDERPLCTFGSGXXXXXXHNDHPNGRIMDQLRASIDYCSSWMLVRPHELVRVSAAFQAAFPAPNDGKDRCDFVAAVPVRLAYNDWQRYRGISTTGTPDGVPSNPQQIQLYPRTRKGERLLQDPQNRVGMRWSPTPYRPWKTLERMATHDQYWESNQDHYLLCAGYEAFPPGSGVYIELSVTDMMKAEDAGDGQRAGARVAREVLGLPGANGQKWFVFHVSRPDE-AHEEAFNITIRAIVDTSKMPGVPRPHEPGRAPQLAQPPV--------------------------------------------------------------------------LP---------------------------------------------------------PPPSTV---------------RSAFDRQNVDLKALKMMTAESELSGIAIPLGPRIKLMKELGIARGR 352
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BLAST of mRNA_E-siliculosus-1a_F_contig1266.1637.1 vs. uniprot
Match: A0A6H5K610_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K610_9PHAE)

HSP 1 Score: 100 bits (248), Expect = 6.390e-21
Identity = 140/181 (77.35%), Postives = 142/181 (78.45%), Query Frame = 0 
Query:  279 MPAVPRRPEPSRAPQLAQPPVPPPP----STGRPGAVPAPPASFNAQQXXXXXXXXXXQPFAAPANFAGPSPXXXXXXXXXXXXNASSASNSP-AEGQKQLPGSVSFNHGGPAAKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPQQPPENTVDELSDLLSSLNMAKFR 454
            MPAVPRRPEPSRAPQL QPP+        STGRPGAVPAPPASFNA Q XXXXXXXXX       NFAG SP  XXXXXXXXXX          AEGQ+QLPGSVSFNHGGPA   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     ENTVDELSDLLSSLNMAKFR
Sbjct:    1 MPAVPRRPEPSRAPQLVQPPMXXXXXXXXSTGRPGAVPAPPASFNAHQQXXXXXXXXXXXXXXXTNFAGRSPPPXXXXXXXXXXXXXXXXXXXQAEGQEQLPGSVSFNHGGPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---ENTVDELSDLLSSLNMAKFR 178
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1266.1637.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G7D8_ECTSI1.350e-21665.53Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K610_9PHAE6.390e-2177.35Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001660Sterile alpha motif domainSMARTSM00454SAM_4coord: 433..499
e-value: 3.5E-5
score: 33.2
IPR013761Sterile alpha motif/pointed domain superfamilyGENE3D1.10.150.50coord: 438..497
e-value: 2.2E-10
score: 42.1
IPR013761Sterile alpha motif/pointed domain superfamilySUPERFAMILY47769SAM/Pointed domaincoord: 433..494
NoneNo IPR availableGENE3D1.20.58.1670coord: 4..74
e-value: 1.9E-9
score: 39.2

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1266contigE-siliculosus-1a_F_contig1266:16770..24619 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1266.1637.1mRNA_E-siliculosus-1a_F_contig1266.1637.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1266 16770..26852 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1266.1637.1 ID=prot_E-siliculosus-1a_F_contig1266.1637.1|Name=mRNA_E-siliculosus-1a_F_contig1266.1637.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=500bp
MPPTRPLSTPCRYGYNCTRPDCFYVHPKDMNKDRPKDERPLCTFGSGCFR
KVCHNDHPNGRIMDQLRASIDYCSSWMLVRPHELVRVSAAFKEAFPAPND
GKDRCDFVAAVPVRVAYNDWKRYRGISATGTPDGVPSNPQQIQLYPRTRK
GERLLQDAQNRVGMRWSPTPYRPWKTLERMATHDQHWESNQDHYLLCAGY
EAFPPGSGVYMELSVTDMMKVEDAGDGQRAGARVAREVLGLPGANGQKWF
VFHVSRPDEETNEEAFNITIRAIVDTSKMPAVPRRPEPSRAPQLAQPPVP
PPPSTGRPGAVPAPPASFNAQQQQQQQQRGRGQPFAAPANFAGPSPPPSS
PSTSYAFSNASSASNSPAEGQKQLPGSVSFNHGGPAAKAASAAAAAAPPP
PPQASSLPGGGGGGGGYFQQQQQQQRQPQPQQPPENTVDELSDLLSSLNM
AKFRSAFDRQNVDLKALKMMTAESELSGIAIPLGPRIKLMKELGIARGR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013761SAM/pointed_sf
IPR001660SAM