prot_E-siliculosus-1a_F_contig1263.1627.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1263.1627.1
Unique Nameprot_E-siliculosus-1a_F_contig1263.1627.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length151
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig1263.1627.1 vs. uniprot
Match: B5LWH5_9PHYC (Uncharacterized protein n=1 Tax=Feldmannia species virus TaxID=39420 RepID=B5LWH5_9PHYC)

HSP 1 Score: 81.3 bits (199), Expect = 1.620e-16
Identity = 58/153 (37.91%), Postives = 83/153 (54.25%), Query Frame = 0 
Query:    1 VACGTIVHNNKTQVASGNTQSNSRFVYDQQSQDTTEVSRNATVLGASGQGAHVELSTLVTVDGERSMQPV-IKSSPTSTTFSSLRGGLVANLTIDGSISWDRDESCLYLYANKAFRFKYMESNGVSPSMLVLEGLNPTTL--QYTPKFEISSD 150
            ++CG +VH     +  G+   +S F YD++S +  EVSR+  ++ +S        S         +MQPV I +S  S   SS    L   LT+DG ISWD   +CLYL A+K FRF++ ES+GV+PS L+LE L        Y PK E +S+
Sbjct:   20 MSCGDVVHGEVVNI--GDLVCSS-FSYDEESGEAREVSRDDVIVDSSSGSVSFRSSVR---SKNSTMQPVLISASSQSCVKSSTDNELFTTLTLDGGISWDSSTACLYLSADKLFRFRFAESDGVNPSRLILEALGSENGGGTYLPKAEFTSE 166
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1263.1627.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
B5LWH5_9PHYC1.620e-1637.91Uncharacterized protein n=1 Tax=Feldmannia species... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1263contigE-siliculosus-1a_F_contig1263:26461..26913 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1263.1627.1mRNA_E-siliculosus-1a_F_contig1263.1627.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1263 26461..26913 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1263.1627.1 ID=prot_E-siliculosus-1a_F_contig1263.1627.1|Name=mRNA_E-siliculosus-1a_F_contig1263.1627.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=151bp
VACGTIVHNNKTQVASGNTQSNSRFVYDQQSQDTTEVSRNATVLGASGQG
AHVELSTLVTVDGERSMQPVIKSSPTSTTFSSLRGGLVANLTIDGSISWD
RDESCLYLYANKAFRFKYMESNGVSPSMLVLEGLNPTTLQYTPKFEISSD
*
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