prot_E-siliculosus-1a_F_contig126.1607.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig126.1607.1
Unique Nameprot_E-siliculosus-1a_F_contig126.1607.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length444
Homology
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig126.1607.1 vs. uniprot
Match: D8LBT1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBT1_ECTSI)

HSP 1 Score: 566 bits (1460), Expect = 1.240e-199
Identity = 362/401 (90.27%), Postives = 368/401 (91.77%), Query Frame = 0 
Query:   47 MQVYLTSWQAMCRASAAIAKGLAKLARGSDGAVGARGDNDGVKDKQGVSPLVDMARLYDSAHRAIDRGVREPTQRQVPFRHRADTTLRETGALLSRFPPIFAKVTRRKQVLADVEAAKSRVRAAEAAREKERDSFAVVAGKEHRRRMSDALATAVAVAEGVTAEVVADAERLEREREAMLVPQVSALVGGQAFFMRRSATVLEKLAAQLPHSALALCRLLGPRPMENPSPPPPLPRR-SSIQQTLSPSVAPVDVSGHSAGSSSTVVRGFDGXXXXXXXXXXXXMGLVSPNQQAATT-TPVFSPPGLRPHGAKFEPVGLSPTGSSASXXXXXXAAVGAPDRSQSCSRPNAMARGDPASTSKSAEAMNPAAAXXXXXXXXXXXX--PPRPEINSGRAGGDGTR 443
            MQVYLTSWQAMCRASAAIAKGLAKLA+GSDGAVGARGDNDGVKDKQGVSPLVDMARLYDSAHRAIDRGVREPTQR V      DTTLRETGALLSRFPPIFAKVTRRKQVLADVEAAKSRVRAAEAAREKERDSFAVVAGKEHRRRMSDALATAVAVAEGVTAEVVADAERLEREREAMLVPQVSALVGGQAFFMRRSA VLEKLA+QLPHSALALC+LLGPRPMEN S PPPLPRR SSIQQTLSPSVAPVDVSGHSAGSSSTVVRGFDGXXXXXXXXXXXX              TP  SPPGL+PHGAKFEPVGLSPTGSSASXXXXXXAAVG PDRSQSCSRP+AMARGDP STSKSAEAMNPAAAXXXXXXXXXXXX  PPRPEI+ GRAGGDG R
Sbjct:    1 MQVYLTSWQAMCRASAAIAKGLAKLAKGSDGAVGARGDNDGVKDKQGVSPLVDMARLYDSAHRAIDRGVREPTQRVVE-----DTTLRETGALLSRFPPIFAKVTRRKQVLADVEAAKSRVRAAEAAREKERDSFAVVAGKEHRRRMSDALATAVAVAEGVTAEVVADAERLEREREAMLVPQVSALVGGQAFFMRRSAVVLEKLASQLPHSALALCQLLGPRPMENRSAPPPLPRRRSSIQQTLSPSVAPVDVSGHSAGSSSTVVRGFDGXXXXXXXXXXXXXXXXXXXXXXXXXXTPALSPPGLQPHGAKFEPVGLSPTGSSASXXXXXXAAVGTPDRSQSCSRPSAMARGDPTSTSKSAEAMNPAAAXXXXXXXXXXXXLLPPRPEISGGRAGGDGKR 396
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig126.1607.1 vs. uniprot
Match: A0A6H5KWM0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWM0_9PHAE)

HSP 1 Score: 378 bits (970), Expect = 6.510e-127
Identity = 253/288 (87.85%), Postives = 262/288 (90.97%), Query Frame = 0 
Query:  157 LADVEAAKSRVRAAEAAREKERDSFAVVAGKEHRRRMSDALATAVAVAEGVTAEVVADAERLEREREAMLVPQVSALVGGQAFFMRRSATVLEKLAAQLPHSALALCRLLGPRPMENPSPPPPLPRRSSIQQTLSPSVAPVDVSGHSAGSSSTVVRGFDGXXXXXXXXXXXXMGLVSPNQQAATTT-PVFSPPGLRPHGAKFEPVGLSPTGSSASXXXXXXAAVGAPDRSQSCSRPNAMARGDPASTSKSAEAMNPAAAXXXXXXXXXXXXPPRPEINSGRAGGDGTR 443
            +ADVEAAKSRVRAAEAAREKERDSFAVVAGKEHRRRMSDALATAVAVA+GVTAEVVADAERLERER AMLVPQVSALVGGQAFFMRRSATVLEKLAAQLPHSALALCRLLGPRPMENP  P       SIQQT S S+A VDVSGHSAGSSSTVVRGFD XXXXXXXXXXXX GL+SP++QAATTT P  SPPGL+ HGAKFEPVGLSPTGSSA XXXXXXAAVG PDRSQSCSRPNAMARGDP STSKSAEA+NPAAAXXXXXXXXXXXX PRPE + GRAGGDG R
Sbjct:    1 MADVEAAKSRVRAAEAAREKERDSFAVVAGKEHRRRMSDALATAVAVADGVTAEVVADAERLERERAAMLVPQVSALVGGQAFFMRRSATVLEKLAAQLPHSALALCRLLGPRPMENPFTPXXXXXXXSIQQTFSTSIASVDVSGHSAGSSSTVVRGFDXXXXXXXXXXXXXXGLISPHRQAATTTTPALSPPGLQSHGAKFEPVGLSPTGSSAXXXXXXXAAVGTPDRSQSCSRPNAMARGDPTSTSKSAEAINPAAAXXXXXXXXXXXXXPRPETSGGRAGGDGKR 288
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig126.1607.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LBT1_ECTSI1.240e-19990.27Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KWM0_9PHAE6.510e-12787.85Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 153..180
IPR027267AH/BAR domain superfamilyGENE3D1.20.1270.60coord: 3..258
e-value: 9.0E-19
score: 69.8
IPR027267AH/BAR domain superfamilySUPERFAMILY103657BAR/IMD domain-likecoord: 23..255

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig126contigE-siliculosus-1a_F_contig126:68308..73258 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig126.1607.1mRNA_E-siliculosus-1a_F_contig126.1607.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig126 67227..73380 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig126.1607.1 ID=prot_E-siliculosus-1a_F_contig126.1607.1|Name=mRNA_E-siliculosus-1a_F_contig126.1607.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=444bp
MVFGRKRGFLSSWTSRSVETDPDLEFKARVHKVEVMHKTLAELQFNMQVY
LTSWQAMCRASAAIAKGLAKLARGSDGAVGARGDNDGVKDKQGVSPLVDM
ARLYDSAHRAIDRGVREPTQRQVPFRHRADTTLRETGALLSRFPPIFAKV
TRRKQVLADVEAAKSRVRAAEAAREKERDSFAVVAGKEHRRRMSDALATA
VAVAEGVTAEVVADAERLEREREAMLVPQVSALVGGQAFFMRRSATVLEK
LAAQLPHSALALCRLLGPRPMENPSPPPPLPRRSSIQQTLSPSVAPVDVS
GHSAGSSSTVVRGFDGGGSRGGGSSSSTMGLVSPNQQAATTTPVFSPPGL
RPHGAKFEPVGLSPTGSSASSPPPPPAAVGAPDRSQSCSRPNAMARGDPA
STSKSAEAMNPAAAAAAAAAPAAPLLPPRPEINSGRAGGDGTR*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027267AH/BAR_dom_sf