prot_E-siliculosus-1a_F_contig1249.1548.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1249.1548.1
Unique Nameprot_E-siliculosus-1a_F_contig1249.1548.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length508
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig1249.1548.1 vs. uniprot
Match: D8LHL4_ECTSI (DUF3342 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHL4_ECTSI)

HSP 1 Score: 372 bits (956), Expect = 3.370e-117
Identity = 232/259 (89.58%), Postives = 236/259 (91.12%), Query Frame = 0 
Query:    1 MSCRAAPPTVSFRGQLLRRHEPLSPWSLTRTVTSLHRKGMSWTAVYWFLWGLTQPLYCVRCREVFLAGDIGHCRSHPQQAFFPGDSGCGSSTTXXXXXXISGEEQGGVGVGAADGYYPCCKSPVNRFSLEPPPLGCVSLDHVVRDADEDPLVLRVLQLQRANISYQARDWRNAVHEETSAAVKSAVGSGSDGGGAYSXXXXXXXXXXXXXXXXXXXXXXXXXXXNYGSRGNSGGGDGVRGXXXXXGS--GIVSTDKMPA 257
            MSCRAAPPTVSFRGQLLRRHEPLSPWSLTRTVTSLHRKGMSWTAVYWFLWGLTQPLYCVRCREVFLAGDIGHCRSHPQQAFFPGDSGCGSSTTXXXXXXISGEE+GGVGVGAADGYYPCC+SPVNRFSLEPPPLGCVSLDHVVRDADEDPLVLRVLQLQRANISYQ  DWR+AV+EET A VKSAVG GSDG     XXXXXXXXXXXXXXXXXXXXXXXXXXX   SRGNS GGD VRG XXXX    GIV TDK  A
Sbjct:  516 MSCRAAPPTVSFRGQLLRRHEPLSPWSLTRTVTSLHRKGMSWTAVYWFLWGLTQPLYCVRCREVFLAGDIGHCRSHPQQAFFPGDSGCGSSTTXXXXXXISGEERGGVGVGAADGYYPCCQSPVNRFSLEPPPLGCVSLDHVVRDADEDPLVLRVLQLQRANISYQ--DWRDAVNEETRAVVKSAVGPGSDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRGNSSGGDRVRGGXXXXXXXFGIVGTDKAAA 772
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BLAST of mRNA_E-siliculosus-1a_F_contig1249.1548.1 vs. uniprot
Match: A0A6H5K7D3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7D3_9PHAE)

HSP 1 Score: 138 bits (348), Expect = 4.800e-36
Identity = 62/62 (100.00%), Postives = 62/62 (100.00%), Query Frame = 0 
Query:    1 MSCRAAPPTVSFRGQLLRRHEPLSPWSLTRTVTSLHRKGMSWTAVYWFLWGLTQPLYCVRCR 62
            MSCRAAPPTVSFRGQLLRRHEPLSPWSLTRTVTSLHRKGMSWTAVYWFLWGLTQPLYCVRCR
Sbjct:   31 MSCRAAPPTVSFRGQLLRRHEPLSPWSLTRTVTSLHRKGMSWTAVYWFLWGLTQPLYCVRCR 92
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BLAST of mRNA_E-siliculosus-1a_F_contig1249.1548.1 vs. uniprot
Match: A0A835YQX4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQX4_9STRA)

HSP 1 Score: 123 bits (308), Expect = 4.800e-26
Identity = 77/203 (37.93%), Postives = 102/203 (50.25%), Query Frame = 0 
Query:    1 MSCRAAPPTVSFRGQLLRRHEPLSPWSLTRTVTSLHRKGMSWTAVYWFLWGLTQPLYCVRCREVFLAGDI-----GHCRSH---PQQAF--FPGDSGCG------SSTTXXXXXXISGEEQGGV---------GVGAADGYYPCCKSPVNRFSLEPPPLGCVSLDHVVR-DADEDPLVLRVLQLQRANISYQARDWRNAVHEE 177
            ++C  APP V  RG+L+RRH P  PWSLT  V +LH +GM+WT VYW LWG T+ L C RC E F A +         R H   P+ ++  F   + C       +S T      I+  + GG            GA +G + CC++   RFSL+    GC   DHV   DA E    L +L LQR +I+  A  WR A+ EE
Sbjct:  369 LTCARAPPLVDARGRLVRRHAPARPWSLTALVAALHARGMTWTEVYWLLWGATRTLRCRRCGEAFTASERKSNAESRLRPHAFTPESSYAVFETAASCRLASPSIASLTRARALPIAPRQIGGCRHHPGRAAYAAGACEGRWSCCRAAAARFSLDTAAPGCAVTDHVPEEDAPESAEALALLPLQRRSIT--AEGWREAIAEE 569
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1249.1548.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LHL4_ECTSI3.370e-11789.58DUF3342 domain-containing protein n=1 Tax=Ectocarp... [more]
A0A6H5K7D3_9PHAE4.800e-36100.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YQX4_9STRA4.800e-2637.93Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR20946UNCHARACTERIZEDcoord: 11..171

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1249contigE-siliculosus-1a_F_contig1249:22636..29731 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1249.1548.1mRNA_E-siliculosus-1a_F_contig1249.1548.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1249 21781..29928 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1249.1548.1 ID=prot_E-siliculosus-1a_F_contig1249.1548.1|Name=mRNA_E-siliculosus-1a_F_contig1249.1548.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=508bp
MSCRAAPPTVSFRGQLLRRHEPLSPWSLTRTVTSLHRKGMSWTAVYWFLW
GLTQPLYCVRCREVFLAGDIGHCRSHPQQAFFPGDSGCGSSTTGASTTGI
SGEEQGGVGVGAADGYYPCCKSPVNRFSLEPPPLGCVSLDHVVRDADEDP
LVLRVLQLQRANISYQARDWRNAVHEETSAAVKSAVGSGSDGGGAYSSGG
SGGGGIGVAGDAATGKGGTYDASTNYGSRGNSGGGDGVRGGGGGGGSGIV
STDKMPAKRQASAGNKRPPRGPDFPPAVVTTTTTTTTTCIAATGGNGGRP
AAPKESGSSNSSGGGTSTSTGGNSSSGNSSGQMTPSSSSSSPTARVAAPP
PAGQRPASAGSKANGVSGGIGDGGASSGSAEDAAATPGEPPTPAGLPAGG
ISRGEEGTVVVPTATSGMNCRRIWEVRASEVLSDRERGLLPNEHPVQRVS
LQGGFADWDNAPRDCSRMAEGQARRWQTDALRENDGLRIAKMCDDLRRKR
RGKQPQQ*
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