prot_E-siliculosus-1a_F_contig124.1498.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig124.1498.1 vs. uniprot
Match: A0A6H5L4H0_9PHAE (Coilin n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4H0_9PHAE) HSP 1 Score: 240 bits (612), Expect = 7.200e-67 Identity = 138/189 (73.02%), Postives = 147/189 (77.78%), Query Frame = 0
Query: 1 MDAVALPPAVVSSPRRIRVVFTADAGCVPSSNPTLTKRWIFIPPRLTVIGDLAHHLARQLKQRKGKKARSSSLMLTLDGFVLPPTESLDVLRETDVVTLTLQQSDGREHGRTAIAGSXXXXXXXXXXXXXXXXXXXXXX---RRGSKEGAVSGVGNKXXXXXXXXXXXXXXXXXKRSRTGSPAVESVVS 186
MD VALPPAV SSPRRIRVVF ADAGCVPSSNPTLTKRWIFIPPRLTVIGDLAHHL RQLK+RKG+KARSSSL+LTLDGFVLPPTESLDVLRETDVVTLTL+QSDGREHGRTAI+G+ XXXXXXX +RG +EG+VSGVGNK KRSRTGSPAVES S
Sbjct: 54 MDTVALPPAVASSPRRIRVVFKADAGCVPSSNPTLTKRWIFIPPRLTVIGDLAHHLTRQLKRRKGRKARSSSLVLTLDGFVLPPTESLDVLRETDVVTLTLRQSDGREHGRTAISGNSTTXXXXXXXGAGKAKTNQKAKAPKKRGGREGSVSGVGNKAGGKKRGAPAVGAAAGRKRSRTGSPAVESSAS 242
BLAST of mRNA_E-siliculosus-1a_F_contig124.1498.1 vs. uniprot
Match: A0A0P0Y9A7_ORYSJ (Coilin n=1 Tax=Oryza sativa subsp. japonica TaxID=39947 RepID=A0A0P0Y9A7_ORYSJ) HSP 1 Score: 56.6 bits (135), Expect = 1.590e-6 Identity = 33/94 (35.11%), Postives = 54/94 (57.45%), Query Frame = 0
Query: 5 ALPPAVVSSPRRIRVVFTADAGCVPSSNPTLTKR-WIFIPPRLTVIGDLAHHLARQLKQRKGKKARSSSLMLTLDGFVLPPTESLDVLRETDVV 97
A PPA R+R+VF S + +R W+ +PP L+ + DLA H+A + + R+ + S ++L++DGFVLPP ES + R+ D++
Sbjct: 2 ATPPAQAV---RLRLVFDNQRILRRSLRESGLRRCWLLLPPELSTVSDLAAHIAARFRLRR---SCPSCVILSIDGFVLPPFESTCIFRDNDII 89
BLAST of mRNA_E-siliculosus-1a_F_contig124.1498.1 vs. uniprot
Match: A0A452ZID7_AEGTS (Coilin n=1 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A452ZID7_AEGTS) HSP 1 Score: 57.4 bits (137), Expect = 1.920e-5 Identity = 30/93 (32.26%), Postives = 51/93 (54.84%), Query Frame = 0
Query: 5 ALPPAVVSSPRRIRVVFTADAGCVPSSNPTLTKRWIFIPPRLTVIGDLAHHLARQLKQRKGKKARSSSLMLTLDGFVLPPTESLDVLRETDVV 97
A PPA SP R+R+VF + + L + W+ + P L + DL+ H+A + + + + ++LT+DGF LPP ES + R+ D++
Sbjct: 28 ATPPAXXPSPVRLRLVFD-KTRLLRRAQRDLRRCWLLLRPELATVADLSAHVAARFRLHR---SCPGGVVLTMDGFALPPFESTCIFRDKDII 116
BLAST of mRNA_E-siliculosus-1a_F_contig124.1498.1 vs. uniprot
Match: B8BP67_ORYSI (Coilin n=3 Tax=Oryza sativa TaxID=4530 RepID=B8BP67_ORYSI) HSP 1 Score: 58.2 bits (139), Expect = 2.460e-5 Identity = 33/102 (32.35%), Postives = 58/102 (56.86%), Query Frame = 0
Query: 7 PPAVVSSPR---RIRVVFTADAGCVPSSNPTLTKR-WIFIPPRLTVIGDLAHHLARQLKQRKGKKARSSSLMLTLDGFVLPPTESLDVLRETDVVTLTLQQS 104
PP + + P R+R+VF S + +R W+ +PP L+ + DLA H+A + + R+ + S ++L++DGFVLPP ES + R+ D++ + + S
Sbjct: 130 PPPMATPPAQAVRLRLVFDNQRILRRSLRESGLRRCWLLLPPELSTVSDLAAHIAARFRLRR---SCPSCVILSIDGFVLPPFESTCIFRDNDIIRVKQKAS 228
BLAST of mRNA_E-siliculosus-1a_F_contig124.1498.1 vs. uniprot
Match: A0A0E0RG41_ORYRU (Coilin n=7 Tax=Oryza TaxID=4527 RepID=A0A0E0RG41_ORYRU) HSP 1 Score: 57.0 bits (136), Expect = 5.330e-5 Identity = 34/101 (33.66%), Postives = 57/101 (56.44%), Query Frame = 0
Query: 5 ALPPAVVSSPRRIRVVFTADAGCVPSSNPTLTKR-WIFIPPRLTVIGDLAHHLARQLKQRKGKKARSSSLMLTLDGFVLPPTESLDVLRETDVVTLTLQQS 104
A PPA R+R+VF S + +R W+ +PP L+ + DLA H+A + + R+ + S ++L++DGFVLPP ES + R+ D++ + + S
Sbjct: 2 ATPPAQAV---RLRLVFDNQRILRRSLRESGLRRCWLLLPPELSTVSDLAAHIAARFRLRR---SCPSCVILSIDGFVLPPFESTCIFRDNDIIRVKQKAS 96
BLAST of mRNA_E-siliculosus-1a_F_contig124.1498.1 vs. uniprot
Match: A0A3B5ZYF5_WHEAT (Coilin n=23 Tax=Triticinae TaxID=1648030 RepID=A0A3B5ZYF5_WHEAT) HSP 1 Score: 56.6 bits (135), Expect = 7.090e-5 Identity = 30/93 (32.26%), Postives = 51/93 (54.84%), Query Frame = 0
Query: 5 ALPPAVVSSPRRIRVVFTADAGCVPSSNPTLTKRWIFIPPRLTVIGDLAHHLARQLKQRKGKKARSSSLMLTLDGFVLPPTESLDVLRETDVV 97
A PPA SP R+R+VF + + L + W+ + P L + DL+ H+A + + + + ++LT+DGF LPP ES + R+ D++
Sbjct: 2 ATPPAPSPSPVRLRLVFD-KTRLLRRAQRDLRRCWLLLRPELATVADLSAHVAARFRLHR---SCPGGVVLTMDGFALPPFESTCIFRDKDII 90 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig124.1498.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 6
InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_E-siliculosus-1a_F_contig124.1498.1 ID=prot_E-siliculosus-1a_F_contig124.1498.1|Name=mRNA_E-siliculosus-1a_F_contig124.1498.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=443bpback to top |