prot_E-siliculosus-1a_F_contig1232.1456.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1232.1456.1
Unique Nameprot_E-siliculosus-1a_F_contig1232.1456.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length236
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig1232.1456.1 vs. uniprot
Match: A0A6H5K161_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K161_9PHAE)

HSP 1 Score: 404 bits (1038), Expect = 2.890e-131
Identity = 226/263 (85.93%), Postives = 232/263 (88.21%), Query Frame = 0 
Query:    1 MSMLLEAVHRVNLQRAAALLARGADVNTTDAQGVTPLIIACERG---------------------------ELKMLDLLLKARASTKMVTNDTQSSCLHIAAKNNAAEIVLRLLEVDPTIEERATSQGDTALMVACLSAVETEASSATLNALLQPRLTTTTSPSNKATSAPPRKTGSYASAGEGKAPVAVLGPDDPRLVARNRHGHTALHCAAFSQSPTAVRLLLEAGADCTIGDKAGRTAVEVALNLNKKKATALREGARGG 236
            MSMLLEAVH+VN+QRAAALLARGADVNTTDAQGVTPLIIACERG                           ELKMLDLLLKARASTKMVTNDTQSSCLHIAAKNNAAEIVLRLLEVDPTIEE+ATSQGDTALMVACLSAVETEASSATLNALL+PR T+TT PSN ATSAPPRKTGSYASAG+GKAPVAVLGPDDPRLVARNRHGHTALHCAAFSQSPTAVRLLLEAGADCTIGDKAGRTAVEVALNLNKKKAT LREGARGG
Sbjct:    1 MSMLLEAVHQVNVQRAAALLARGADVNTTDAQGVTPLIIACERGALCLGTSSNHAVTVTAXXXXXXPAATGELKMLDLLLKARASTKMVTNDTQSSCLHIAAKNNAAEIVLRLLEVDPTIEEKATSQGDTALMVACLSAVETEASSATLNALLRPRPTSTTGPSNNATSAPPRKTGSYASAGDGKAPVAVLGPDDPRLVARNRHGHTALHCAAFSQSPTAVRLLLEAGADCTIGDKAGRTAVEVALNLNKKKATGLREGARGG 263
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BLAST of mRNA_E-siliculosus-1a_F_contig1232.1456.1 vs. uniprot
Match: D8LLU4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLU4_ECTSI)

HSP 1 Score: 385 bits (989), Expect = 1.430e-124
Identity = 209/224 (93.30%), Postives = 214/224 (95.54%), Query Frame = 0 
Query:    1 MSMLLEAVHRVNLQRAAALLARGADVNTTDAQGVTPLIIACERGELKMLDLLLKARASTKMVTNDTQSSCLHIAAKNNAAEIVLRLLEVDPTIEERATSQGDTALMVACLSAVETEASSATLNALLQPRLTTTTSPSNKATSAPPRKTGSYASAGEGKAPVAVLGPDDPRLVARNRHGHTALHCAAFSQSPTAVRLLLEAGADCTIGDKAGRTAVEVALNLNKK 224
            MSMLLEAVHRVN+QRAA LLARGADVNTTDAQGVTPLIIACERGELKMLDLLLKARASTKMVTNDTQSSCLHIAAKNNA +IVLRLLEVDPTIEERATSQGDTALMVACLSAVETEASSATLNALLQPRL TTT PSNKA+  PPRKTG YASAG+GKAPVAVLGPDDPRLVARNRHGHTALHCAAFSQSPTAVRLLLEAGADCTI D+AG TAVEVALNL KK
Sbjct:    1 MSMLLEAVHRVNVQRAATLLARGADVNTTDAQGVTPLIIACERGELKMLDLLLKARASTKMVTNDTQSSCLHIAAKNNAEDIVLRLLEVDPTIEERATSQGDTALMVACLSAVETEASSATLNALLQPRLATTTGPSNKASGPPPRKTGRYASAGDGKAPVAVLGPDDPRLVARNRHGHTALHCAAFSQSPTAVRLLLEAGADCTIRDEAGLTAVEVALNLIKK 224
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BLAST of mRNA_E-siliculosus-1a_F_contig1232.1456.1 vs. uniprot
Match: UPI00067656E0 (ankyrin repeat domain-containing protein n=1 Tax=Bradyrhizobium japonicum TaxID=375 RepID=UPI00067656E0)

HSP 1 Score: 53.5 bits (127), Expect = 9.240e-5
Identity = 33/73 (45.21%), Postives = 46/73 (63.01%), Query Frame = 0 
Query:    2 SMLLEAVHRVNLQRAAALLARGADVNTTDAQGVTPLIIACERGELKMLDLLLKARASTKMVTNDTQSSCLHIA 74
            S LL AV R +L  AA  L  GAD ++ DA+G+TPL+IA  RG+ +M++LLL A A   +V     ++ LH A
Sbjct:    5 SALLTAVRRGDLADAADRLRLGADCDSPDAEGLTPLMIASGRGQAQMVELLLAAGAQVHLVDPRAGATALHKA 77
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1232.1456.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5K161_9PHAE2.890e-13185.93Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LLU4_ECTSI1.430e-12493.30Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
UPI00067656E09.240e-545.21ankyrin repeat domain-containing protein n=1 Tax=B... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 100..134
e-value: 2200.0
score: 2.4
coord: 177..206
e-value: 1.9E-4
score: 30.8
coord: 32..61
e-value: 0.1
score: 21.7
coord: 66..95
e-value: 1.8
score: 17.6
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 32..64
score: 9.858
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 177..209
score: 11.728
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 161..235
e-value: 2.3E-12
score: 48.9
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 1..139
e-value: 1.1E-22
score: 82.4
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 4..225
NoneNo IPR availablePFAMPF13857Ank_5coord: 170..218
e-value: 7.0E-7
score: 29.4
NoneNo IPR availablePANTHERPTHR24134FAMILY NOT NAMEDcoord: 173..226
coord: 4..119
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 18..92
e-value: 9.5E-11
score: 42.1
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 1..236
score: 30.264

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1232contigE-siliculosus-1a_F_contig1232:30345..33793 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1232.1456.1mRNA_E-siliculosus-1a_F_contig1232.1456.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1232 30345..33793 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1232.1456.1 ID=prot_E-siliculosus-1a_F_contig1232.1456.1|Name=mRNA_E-siliculosus-1a_F_contig1232.1456.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=236bp
MSMLLEAVHRVNLQRAAALLARGADVNTTDAQGVTPLIIACERGELKMLD
LLLKARASTKMVTNDTQSSCLHIAAKNNAAEIVLRLLEVDPTIEERATSQ
GDTALMVACLSAVETEASSATLNALLQPRLTTTTSPSNKATSAPPRKTGS
YASAGEGKAPVAVLGPDDPRLVARNRHGHTALHCAAFSQSPTAVRLLLEA
GADCTIGDKAGRTAVEVALNLNKKKATALREGARGG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR020683Ankyrin_rpt-contain_dom
IPR036770Ankyrin_rpt-contain_sf
IPR002110Ankyrin_rpt