prot_E-siliculosus-1a_F_contig123.1442.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig123.1442.1
Unique Nameprot_E-siliculosus-1a_F_contig123.1442.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length502
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig123.1442.1 vs. uniprot
Match: D8LHP0_ECTSI (SAP domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHP0_ECTSI)

HSP 1 Score: 662 bits (1707), Expect = 6.860e-229
Identity = 408/509 (80.16%), Postives = 422/509 (82.91%), Query Frame = 0
Query:    1 MGPCDAVQCCKDA--VIDDPRPDNAVDIPSAPPPPAHQPATNGDAPEPGNTSMVTKVESDAVRQDHDLVASNTASVVAVDAATGIALDPRAMVAEAXXXXXXXXXXXXDASAGLHAFVESLVISGVPLRILPGDAPSASTSQLDDGRSAKLIRVVLSMAMVLLV---IVHIYEARSLRKSMRDFVDEGRTLAHATDSRELAHSRPVTGSGGGGG---ETQRLWQMLAWFLTKLGSHVATVTMMTEVWEVLARLGGRLNAGEVRVGLLEFDLTAIQGKVADAVARMALQARRLASVKQSVGRMAVKQKGLVETVGFVSRSVSALKNGLADLASRVAGLEETSRRLDXXXXRHDDLQNLVVEIGKKMALNRAEAAAFRGKIRAESTASRADSDAWLRSIEDDLSALQCAFEERAEGRETRPAEGAGIGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATXXXXXXXXXXXXXPGAGTEITRRAAEVKNTAGVTGKATPLTISELMV 501
            MGPCDAVQCCKD   VI+DPRPDNAVDIPSAPPPPA QPAT G APEPGNTSM TK   DAV QD +LV SNTASVV  DA TG+A DPRAMVAEA  XXXXXXXXX DASA LHAFVESLVISGVPLRILP DAPSASTSQLD GRS  LIRVVL +AMVLLV   IVHIYEAR+LRKSMR+FV+EGRTLAHATDSREL HSRPVTG         E QRLWQM AWFLTKLGSHVATVTMMTEVW VLARLGGRLNAGEVRVGLLEFDL+AIQGKVADAVARMALQARRLASVKQSVGR+ VKQKG+VETVGFVSRSVSALKNGLADLASRVAGLEETSR+LD    RHDDLQNLVVEIGKKMALNRAEAA FRGKIRAES ASRADSDAWLRS+EDDLSALQCAFEERAEGRETRPAEGAG                                XXXX  XXXXXXXXXXX  PG GTEITR+ AEVKNTAGVTG+ATPLTISELMV
Sbjct:  408 MGPCDAVQCCKDGAVVINDPRPDNAVDIPSAPPPPADQPATPGAAPEPGNTSMPTKEAPDAVPQDLELVTSNTASVVVTDAVTGVAGDPRAMVAEAAAXXXXXXXXXGDASAALHAFVESLVISGVPLRILPVDAPSASTSQLDGGRSTHLIRVVLPLAMVLLVLLVIVHIYEARTLRKSMREFVEEGRTLAHATDSRELTHSRPVTGGXXXXXXXXENQRLWQMFAWFLTKLGSHVATVTMMTEVWGVLARLGGRLNAGEVRVGLLEFDLSAIQGKVADAVARMALQARRLASVKQSVGRIVVKQKGVVETVGFVSRSVSALKNGLADLASRVAGLEETSRKLDELARRHDDLQNLVVEIGKKMALNRAEAAGFRGKIRAESMASRADSDAWLRSVEDDLSALQCAFEERAEGRETRPAEGAG-------------------------------KXXXXXXXXXXXXXXXXXRGPGRGTEITRQTAEVKNTAGVTGEATPLTISELMV 885          
BLAST of mRNA_E-siliculosus-1a_F_contig123.1442.1 vs. uniprot
Match: A0A6H5JVG1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVG1_9PHAE)

HSP 1 Score: 440 bits (1131), Expect = 2.530e-148
Identity = 271/355 (76.34%), Postives = 289/355 (81.41%), Query Frame = 0
Query:   51 MVTKVESDAVRQDHDLVASNTASVVAVDAATGIALDPRAMVAEAXXXXXXXXXXXX------DASAGLHAFVESLVISGVPLRILPGDAPSASTSQLDDGRSAKLIRVVLSMAMVLLVIV--HIYEARSLRKSMRDFVDEGRTLAHATDSRELAHSRPVTGSGGGGGETQRLWQMLAWFLTKLGSHVATVTMMTEVWEVLARLGGRLNAGEVRVGLLEFDLTAIQGKVADAVARMALQARRLASVKQSVGRMAVKQKGLVETVGFVSRSVSALKNGLADLASRVAGLEETSRRLDXXXXRHDDLQNLVVEIGKKMALNRAEAAAFRGKIRAESTASRADSDAWLRSIEDDLSALQ 397
            MVTKVESDAV QD + VASNTASVVA+DAATGIA DPRAMVAEA   XXXXXXXXX      DASA LHAFVESL IS VPLRIL  DAPSASTSQLD GR+ +LIRVVL + M+LLV+V  HIYEAR+LRKSM DFV+EG TL HATDSRELAHSRPVTG     GETQRLWQM AWFLTKLGSHVAT+TMMT VW VLARLGGRLNAGEVR+GL+EFDL+AI+GKVADAVARM LQARRLASVKQSVGRMA +                     LA+L SRVA LEETSR+LD    RHDDLQNLVVEIGK+MALNR EAA FRGKIRAESTASRADSDAWLRSIEDDLSALQ
Sbjct:    1 MVTKVESDAVPQDFEPVASNTASVVAIDAATGIAGDPRAMVAEATATXXXXXXXXXXXXXXGDASAALHAFVESLAISAVPLRILSVDAPSASTSQLDGGRT-QLIRVVLPLVMMLLVLVMVHIYEARTLRKSMGDFVEEGSTLVHATDSRELAHSRPVTGGXXXXGETQRLWQMFAWFLTKLGSHVATLTMMTNVW-VLARLGGRLNAGEVRLGLMEFDLSAIRGKVADAVARMVLQARRLASVKQSVGRMATR---------------------LANLGSRVAVLEETSRKLDELARRHDDLQNLVVEIGKRMALNRVEAAGFRGKIRAESTASRADSDAWLRSIEDDLSALQ 332          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig123.1442.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LHP0_ECTSI6.860e-22980.16SAP domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5JVG1_9PHAE2.530e-14876.34Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 329..356
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 149..167
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 168..501
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..148
NoneNo IPR availableTMHMMTMhelixcoord: 149..167

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig123contigE-siliculosus-1a_F_contig123:20706..23545 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig123.1442.1mRNA_E-siliculosus-1a_F_contig123.1442.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig123 16835..23545 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig123.1442.1 ID=prot_E-siliculosus-1a_F_contig123.1442.1|Name=mRNA_E-siliculosus-1a_F_contig123.1442.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=502bp
MGPCDAVQCCKDAVIDDPRPDNAVDIPSAPPPPAHQPATNGDAPEPGNTS
MVTKVESDAVRQDHDLVASNTASVVAVDAATGIALDPRAMVAEAAAAATA
AAAASGDASAGLHAFVESLVISGVPLRILPGDAPSASTSQLDDGRSAKLI
RVVLSMAMVLLVIVHIYEARSLRKSMRDFVDEGRTLAHATDSRELAHSRP
VTGSGGGGGETQRLWQMLAWFLTKLGSHVATVTMMTEVWEVLARLGGRLN
AGEVRVGLLEFDLTAIQGKVADAVARMALQARRLASVKQSVGRMAVKQKG
LVETVGFVSRSVSALKNGLADLASRVAGLEETSRRLDELARRHDDLQNLV
VEIGKKMALNRAEAAAFRGKIRAESTASRADSDAWLRSIEDDLSALQCAF
EERAEGRETRPAEGAGIGGGAGGGGGGGGGGGGGGGGGGGGSGRAASGTT
TTATXXXXGGGGGRRGGPGAGTEITRRAAEVKNTAGVTGKATPLTISELM
V*
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