prot_E-siliculosus-1a_F_contig1226.1424.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1226.1424.1
Unique Nameprot_E-siliculosus-1a_F_contig1226.1424.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length410
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig1226.1424.1 vs. uniprot
Match: D7G8N9_ECTSI (Myb-like domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8N9_ECTSI)

HSP 1 Score: 576 bits (1485), Expect = 1.480e-204
Identity = 297/329 (90.27%), Postives = 300/329 (91.19%), Query Frame = 0 
Query:   25 MPPLAAGFVAPTPIAAQPQRRLPPWCEPVSFPPAWDSSRPVPASSKPPASNCNYRSCAARGVRPTSATTSHAGASXXXXXXXXXXXXXXXXGSATSSSPSAVVTQAVEGSKHPAGGFANGALIPLAAEGGNSSGAEGATAVRVDKWGEAAEGNLAGEFEWEGGAEATWTEFEDWLLQDTYSRYAIGSGKHVLWRRMVREVPELMERTPQEARERWLRLTGRLSAGGGEGGSGREGGERMAGSPALDNFYIQPPVLEQWEEIVEGEGMGSFRGNVFGQRGLADGTTMTTAPIDISGRKIQDQYVATQCGVVYELGERRETDLVSQVGRDM 353
            MPPLAAGFVAPTPIAAQPQRRLPPWCEPVSFPPAWDSSRPVPASSKPPASNCNYRSCA RGVRPTSATTSHAGAS                GSATSSSPSAVVTQAVEGS+HPAGGFANGALIPL+ EGG+SSGAEGATAVRV KWGEAAEGNLAGEFEWEGGAEA WTEFEDWLLQDTYSRYAIGSGKHVLWRRMVREVPELMERTPQEARERWLRLTGRLSAGG EGGS RE GE MAGSPALDNFYIQPPVLEQWEEIVEGEGMGSFRGNVFGQRGLADGT MTTAPIDISGRKIQDQYVATQCGVVYELGERRETDLVSQ    M
Sbjct:    1 MPPLAAGFVAPTPIAAQPQRRLPPWCEPVSFPPAWDSSRPVPASSKPPASNCNYRSCAVRGVRPTSATTSHAGASPSGSSTPKTGANGPGAGSATSSSPSAVVTQAVEGSEHPAGGFANGALIPLSTEGGSSSGAEGATAVRVGKWGEAAEGNLAGEFEWEGGAEAAWTEFEDWLLQDTYSRYAIGSGKHVLWRRMVREVPELMERTPQEARERWLRLTGRLSAGGAEGGSRRERGEVMAGSPALDNFYIQPPVLEQWEEIVEGEGMGSFRGNVFGQRGLADGTAMTTAPIDISGRKIQDQYVATQCGVVYELGERRETDLVSQASSKM 329
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BLAST of mRNA_E-siliculosus-1a_F_contig1226.1424.1 vs. uniprot
Match: A0A836CN06_9STRA (Myb-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CN06_9STRA)

HSP 1 Score: 180 bits (457), Expect = 4.820e-51
Identity = 90/171 (52.63%), Postives = 114/171 (66.67%), Query Frame = 0 
Query:  188 AEATWTEFEDWLLQDTYSRYAIGSGKHVLWRRMVREVPELMERTPQEARERWLRLTGRLSAGGGEGGSGREGGERM--------------AGSPALDNFYIQPPVLEQWEEIVEGEGMGSFRGNVFGQRGLADGTTMTTAPIDISGRKIQDQYVATQCGVVYELGERRETD 344
            A+  WTEFEDWLLQDT++RYAIGSGKHVLW RMV EVPEL+ RTPQEAR RWL +TGRL+         R+GG                 +G+P ++ FY+QPP+L  WEE+ +    GSF G+V G  GLADG  + T  +D++GR++ DQYV T+CG V+ELG RR  D
Sbjct:   22 ADMPWTEFEDWLLQDTFARYAIGSGKHVLWNRMVTEVPELIGRTPQEARRRWLHITGRLT-------DQRQGGXXXXXXXXXXXXXXXGSSGAPDVETFYLQPPLLHDWEELED----GSFEGSVEGMGGLADGVLVRTRGVDLAGRRVADQYVRTECGAVFELGARRGAD 181
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1226.1424.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G8N9_ECTSI1.480e-20490.27Myb-like domain-containing protein n=2 Tax=Ectocar... [more]
A0A836CN06_9STRA4.820e-5152.63Myb-like domain-containing protein n=1 Tax=Tribone... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 32..409
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 19..31
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 10..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..9
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..31
IPR017877Myb-like domainPROSITEPS50090MYB_LIKEcoord: 192..243
score: 6.922

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1226contigE-siliculosus-1a_F_contig1226:6062..8744 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1226.1424.1mRNA_E-siliculosus-1a_F_contig1226.1424.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1226 5941..8940 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1226.1424.1 ID=prot_E-siliculosus-1a_F_contig1226.1424.1|Name=mRNA_E-siliculosus-1a_F_contig1226.1424.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=410bp
MVTFKHRSNAVAAALLLAHHRHGNMPPLAAGFVAPTPIAAQPQRRLPPWC
EPVSFPPAWDSSRPVPASSKPPASNCNYRSCAARGVRPTSATTSHAGASP
SGSSTPKTGADGSGAGSATSSSPSAVVTQAVEGSKHPAGGFANGALIPLA
AEGGNSSGAEGATAVRVDKWGEAAEGNLAGEFEWEGGAEATWTEFEDWLL
QDTYSRYAIGSGKHVLWRRMVREVPELMERTPQEARERWLRLTGRLSAGG
GEGGSGREGGERMAGSPALDNFYIQPPVLEQWEEIVEGEGMGSFRGNVFG
QRGLADGTTMTTAPIDISGRKIQDQYVATQCGVVYELGERRETDLVSQVG
RDMTFFFAQTLCLVRDYFPVSVTLVNVPLFRFRALAASCYTGLLPLPPGQ
TPRQQSVQY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR017877Myb-like_dom