prot_E-siliculosus-1a_F_contig1218.1381.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1218.1381.1
Unique Nameprot_E-siliculosus-1a_F_contig1218.1381.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length1058
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1218.1381.1 vs. uniprot
Match: D8LD59_ECTSI (RNA helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD59_ECTSI)

HSP 1 Score: 1201 bits (3108), Expect = 0.000e+0
Identity = 687/786 (87.40%), Postives = 704/786 (89.57%), Query Frame = 0
Query:    1 MLAARRTYGLGRSTLSSSAVAVSRCSRLGALAHATTTRCRSTRIGSIPQVLAARQQHFSGGSAPGADSLSSSPDVGLGRPAGGGRRPAQLARREGKTEWVRYQNMMHQRTGLARRGQLSSLRGGVVGPSVNNDAGSGGVETSADSGAAAAXXXXAEANEPDMATPTAAGSSVTLSPPATMATTSSESTAVIDEWSTSNSSDSRPSSDELHATTNMTARGGPGPDDGDLAASDTVLPIATTTRQETSSRISSEDAVITDVDSRREAALNAELERKFGTEPPQREEISGKPRRRRSRGRDRRGAARAVEGSANELRHEPPAAVSGGGGTAPAAESEIGELNEVPVGEAAGLITGMSGDGTEPASGEGAPRSKSADESRLGRRNRRGGHATGDGRGGGSLGRGGRGKQXXXXXXXXXXXXXXXXSGDSYSQQQGSAWKNIHAKKKLRWLLKGLASDYGVQEMLARHHISKASLLTRISCRQHTMSKLLRVFEDLVLDDPDTAFPGEAGQKVQEEVSSLCYHPKFQADAVLMKRPIRTRTTSGRSFTFSSKQPKRGHEGPFVKERNDVVEKGLIPRLVELAQESYPDEIEATKRMDSIVDLRNPQQGFPLARLRKRRIIYHGGPTNSGKTYQAIERLKKAGANRQPGDGPAGLFCGPLRLLALEVYEQLNSQGVYCSLMTGQEKREVPFATHVSCTIEMASTVNEYEVAVIDEIQMLADEQRGPSWTSAVLGLNCPEIHVCGGMEGAVLVEAMAKETGDDFELREYQRKTELVCAEESLGNNYKNIQPGD 786
            MLAARRTYGLGRSTLS+SAVAVSRCSRLGALAHATT RCRSTRIGS  QV AARQQHFSGGSAPGA+SLSSSP VGLGR AG GRRP QLAR++GKTEWVRYQNMMHQRTGLARR QLSS+RGGVVGPSVNNDAGSGGVETSADS     XXXX   +EPD+ATPTAAGSSVTLSPPATMATTSSESTAVI                            G GPDDGDLAA DTV PIATT RQETSSRISSEDAVITD+DSRREAALNAELERKFGTEPPQ EEISGK RRRRSRGR RRGAARAVEG+ANEL+HEPP+AVSGGGG APAAESE GELNEVPVGEAAG ITGMSGDG +PASGEG PRSKSADESR GRRNRRGG ATGDGRGGGSL        XXXXXXXXXXXXXXXXS DSYSQQQGSAWKN+HAKKKLRWLLKGLASDYGVQEMLARHHISK           HTMSKLLRVFEDLVLD PDTAFPGEAGQK+QEE+SSLCYHPKFQADAVLMKRPIRTRTTSGRSFTFSSKQPKRG EGPFVKERNDVVEKGLIPRLVELAQESY DEIEATKRMDSIVDLRNPQQGFPLARLRKRRIIYHGGPTNSGKTYQAIERLKKAGA+RQPGDGPAGLFCGPLRLLALEVYEQLNSQGVYCSLMTGQEKREVPFATHVSCTIEMASTVNEYEVAVIDEIQMLADEQRGPSWTSAVLGLNCPEIHVCGGMEGAVLVEAMAKETGDDFELREYQRKTELVCAEESLGNNYKNIQPG+
Sbjct:    1 MLAARRTYGLGRSTLSTSAVAVSRCSRLGALAHATTARCRSTRIGSTRQVPAARQQHFSGGSAPGANSLSSSPGVGLGRQAGCGRRPTQLARKKGKTEWVRYQNMMHQRTGLARRDQLSSMRGGVVGPSVNNDAGSGGVETSADSXXXXXXXXXXXXSEPDVATPTAAGSSVTLSPPATMATTSSESTAVI----------------------------GLGPDDGDLAAPDTVPPIATT-RQETSSRISSEDAVITDLDSRREAALNAELERKFGTEPPQLEEISGKTRRRRSRGRGRRGAARAVEGTANELQHEPPSAVSGGGGIAPAAESETGELNEVPVGEAAGPITGMSGDGAKPASGEGTPRSKSADESRRGRRNRRGGDATGDGRGGGSLXX--XXXXXXXXXXXXXXXXXXXXSEDSYSQQQGSAWKNVHAKKKLRWLLKGLASDYGVQEMLARHHISK-----------HTMSKLLRVFEDLVLDHPDTAFPGEAGQKLQEEMSSLCYHPKFQADAVLMKRPIRTRTTSGRSFTFSSKQPKRGREGPFVKERNDVVEKGLIPRLVELAQESYADEIEATKRMDSIVDLRNPQQGFPLARLRKRRIIYHGGPTNSGKTYQAIERLKKAGADRQPGDGPAGLFCGPLRLLALEVYEQLNSQGVYCSLMTGQEKREVPFATHVSCTIEMASTVNEYEVAVIDEIQMLADEQRGPSWTSAVLGLNCPEIHVCGGMEGAVLVEAMAKETGDDFELREYQRKTELVCAEESLGNNYKNIQPGE 744          
BLAST of mRNA_E-siliculosus-1a_F_contig1218.1381.1 vs. uniprot
Match: A0A6H5K988_9PHAE (RNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K988_9PHAE)

HSP 1 Score: 894 bits (2309), Expect = 5.410e-314
Identity = 498/580 (85.86%), Postives = 509/580 (87.76%), Query Frame = 0
Query:  240 TTRQETSSRISSEDAVITDVDSRREAALNAELERKFGTEPPQREEISGKPRRRRSRGRDRRGAARAVEGSANELRHEPPAAVSGGGGTAPAAESEIGELNEVPVGEAAGLITGMSGDGTEPASGEGAPRSKSADESRLGRRNRRGGHATGDGRGGGSLGRGGRGKQXXXXXXXXXXXXXXXXSGDSYSQQQGSAWKNIHAKKKLRWLLKGLASDYGVQEMLARHHISKASLLTRISCRQ---HTMSKLLRVFEDLVLDDPDTAFPGEAGQKVQEEVSSLCYHPKFQADAVLMKRPIRTRTTSGRSFTFSSKQPKRGHEGPFVKERNDVVEKGLIPRLVELAQESYPDEIEATKRMDSIVDLRNPQQGFPLARLRKRRIIYHGGPTNSGKTYQAIERLKKAGANRQPGDGPAGLFCGPLRLLALEVYEQLNSQGVYCSLMTGQEKREVPFATHVSCTIEMASTVNEYEVAVIDEIQMLADEQRGPSWTSAVLGLNCPEIHVCGGMEGAVLVEAMAKE------------------------------TGDDFELREYQRKTELVCAEESLGNNYKNIQPGD 786
            TTRQETSS ISSEDAVITD+DSRREAALNAELERKFGTEPPQREEISGKPRRRRSRGRDRRGAARAVEG+ANEL+HEPPAA  GGGG APAAESE GELNEVPV  A G  TGMSGDG +PASGEG PRS+SA+E R GRRNRRGGHATGD               XXXXXXXXXXXXXXX SGDS+SQQQGSAWKNIHAKKKLRWLLKGLASDYGVQEMLA HH+SKAS  TRISCRQ    TMSKLLRVFEDLVLD PDTAFPGE GQK+QEEVSSLCYHPKFQADAVLMKRPIRTRTTSGRSFTFSSKQPKRG EGPFVKERNDVVEKGLIPRLVELAQESY DEIEATKRMD+IVDLRNPQQGFPLARLRKRRIIYHGGPTNSGKTYQAIERLKKAGANRQPGDGPAGLFCGPLRLLALEVYEQLNSQGVYCSLMTGQEKREVPFATHVSCTIEMASTVNEYEVAVIDEIQMLADEQRGPSWTSAVLGLNCPEIHVCGGMEGAVLVEAMAKE                              TGDDFELREYQRKTELVCAEESLGNNYKNIQPG+
Sbjct:  126 TTRQETSSCISSEDAVITDLDSRREAALNAELERKFGTEPPQREEISGKPRRRRSRGRDRRGAARAVEGTANELQHEPPAAARGGGGIAPAAESETGELNEVPVSAAVGPTTGMSGDGAKPASGEGTPRSRSAEELRRGRRNRRGGHATGDRX---XXXXXXXXXXXXXXXXXXXXXXXXXGSGDSFSQQQGSAWKNIHAKKKLRWLLKGLASDYGVQEMLALHHVSKASFSTRISCRQVSVQTMSKLLRVFEDLVLDHPDTAFPGEEGQKLQEEVSSLCYHPKFQADAVLMKRPIRTRTTSGRSFTFSSKQPKRGREGPFVKERNDVVEKGLIPRLVELAQESYADEIEATKRMDNIVDLRNPQQGFPLARLRKRRIIYHGGPTNSGKTYQAIERLKKAGANRQPGDGPAGLFCGPLRLLALEVYEQLNSQGVYCSLMTGQEKREVPFATHVSCTIEMASTVNEYEVAVIDEIQMLADEQRGPSWTSAVLGLNCPEIHVCGGMEGAVLVEAMAKEAFRVEEIHVEGETRDIVGVWKEEGDRVPAQTGDDFELREYQRKTELVCAEESLGNNYKNIQPGE 702          
BLAST of mRNA_E-siliculosus-1a_F_contig1218.1381.1 vs. uniprot
Match: D8LD58_ECTSI (ATP-dependent RNA and DNA helicase, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD58_ECTSI)

HSP 1 Score: 483 bits (1244), Expect = 4.510e-159
Identity = 248/274 (90.51%), Postives = 250/274 (91.24%), Query Frame = 0
Query:  785 GDAVVAFSRKDIFSIKKEIESKTPHKCCVIYGSLPQETRAHQARLFNSEDTGYDVLVASDAIGMGLNLNIRRVVFHAVSKRTGGGRAAVKLPPTMLKQIGGRAGRHGKQWEYGEVTCLRSTDMAYMNKIMNTPLEPIPKAAIFPSVQHMQEFSNSLDETEAAKPEGQERRRLAETFAAFADKAKVGDRYFLGTHDQHQALANALHPVENLTLKERYAISMAPINGRNALLVRAIFLFATAHAAGLPVFINMQLPPKGTLPKSVRLFFELSSLHN 1058
            GDAVVAFSRKDIFSIKKEIESKTPHKCCVIYGSLPQETRAHQARLFNSEDTGYDVLVASDA+GMGLNLNIRRVVFHAVSKRTGGGRAAVKLPPTMLKQIGGRAGRHGKQWEYGE              IMNTPLEPIPKAAIFPSVQHMQEFSN LDETEA  PEGQERRRLAETFAAFADKAKVGDRYFLGTHDQHQALANALHPVENLTLKERYAISMAPINGRN LLVRAIFLFATAHAAGLPVFINMQLPPKGTLPKS+  F  L S HN
Sbjct:    4 GDAVVAFSRKDIFSIKKEIESKTPHKCCVIYGSLPQETRAHQARLFNSEDTGYDVLVASDAVGMGLNLNIRRVVFHAVSKRTGGGRAAVKLPPTMLKQIGGRAGRHGKQWEYGE--------------IMNTPLEPIPKAAIFPSVQHMQEFSNCLDETEADNPEGQERRRLAETFAAFADKAKVGDRYFLGTHDQHQALANALHPVENLTLKERYAISMAPINGRNTLLVRAIFLFATAHAAGLPVFINMQLPPKGTLPKSMTEFQTLCSKHN 263          
BLAST of mRNA_E-siliculosus-1a_F_contig1218.1381.1 vs. uniprot
Match: A0A7S3UVF2_HETAK (RNA helicase n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UVF2_HETAK)

HSP 1 Score: 431 bits (1107), Expect = 6.020e-133
Identity = 229/489 (46.83%), Postives = 314/489 (64.21%), Query Frame = 0
Query:  569 LIPRLVELAQESYPDEIEATKRMDSIVDLRNPQQGFPLARLRKRRIIYHGGPTNSGKTYQAIERLKKAGANRQPGDGPAGLFCGPLRLLALEVYEQLNSQGVYCSLMTGQEKREVPFATHVSCTIEMASTVNEYEVAVIDEIQMLADEQRGPSWTSAVLGLNCPEIHVCGGMEGAVLVEAMAKETGDDFELREYQRKTELVCAEESLGNNYKNIQPGDAVVAFSRKDIFSIKKEIESKTPHKCCVIYGSLPQETRAHQARLFNSEDTGYDVLVASDAIGMGLNLNIRRVVFHAVSKRTGGGRAAVKLPPTMLKQIGGRAGRHGKQWEYGEVTCLRSTDMAYMNKIMNTPLEPIPKAAIFPSVQHMQEFSNSLDETEAAKPEGQERRRLAETFAAFADKAKVGDRYFLGTHDQHQALANALHPVENLTLKERYAISMAPINGRNALLVRAIFLFATAHAAGLPVFINMQLPPKGTLPKSVRLFFELSSLH 1057
            L    ++     +   I+  +++    +   P   +P ARL +R+II+HGGPTNSGKTY+A++RL++A     P  G  GL+CGPLRLLALEVY++LN  GVYCSL+TGQ+KR VP ATH SCTIE+      ++VAVIDEIQ+LA  +RG +WT A+LGL   E+HVCGG+E A LVE +  +TGD F L  Y R T L     +LG+ Y  ++PGDA+VAFSR DI+SIK EIE+ TPH+CCV+YG+LP E RA QA LFN   + +DVLVASDA+G+GLNLNIRRV+FH V K  G    A  + PT++KQIGGRAGR   ++  G VTCL+  DM Y+   M  PL+P+  A +FPSV+ +Q F+ ++  T           +L      F + ++VG RYFL  +DQ +A A  L P+  L  ++ +   +AP + R+A  +R ++ FA  HA G P  +N+ LP     P++++   EL S H
Sbjct:  161 LFQPFMDYCATKHSKRIQYQRKLLQASNFLRPPDWYPYARLMRRKIIFHGGPTNSGKTYRALQRLRQA----DPARG-GGLYCGPLRLLALEVYQELNRDGVYCSLLTGQDKRIVPGATHASCTIELCDVGRAWDVAVIDEIQLLASAERGSAWTRALLGLQAREVHVCGGLEAAPLVEQLCADTGDSFALASYDRFTPLEIEGRALGS-YDKVEPGDAIVAFSRADIYSIKAEIEANTPHRCCVVYGALPSEARAAQAALFNDPASPFDVLVASDAVGLGLNLNIRRVIFHTVYKWNGKAGVAT-VEPTLVKQIGGRAGRRSSEYAQGRVTCLQEEDMEYLRWAMGVPLKPLTAAGLFPSVEQVQAFAEAMPPTA----------KLNTLLEKFMELSQVGGRYFLCGYDQLRAAAAYLRPLP-LRPQDLFKYCLAPCSTRDAAQMRNLYTFAQGHALGQPAPLNVLLPTAP--PRTLQEVQELCSKH 629          
BLAST of mRNA_E-siliculosus-1a_F_contig1218.1381.1 vs. uniprot
Match: G4YHR7_PHYSP (RNA helicase n=5 Tax=Phytophthora TaxID=4783 RepID=G4YHR7_PHYSP)

HSP 1 Score: 414 bits (1064), Expect = 2.380e-128
Identity = 217/448 (48.44%), Postives = 292/448 (65.18%), Query Frame = 0
Query:  591 MDSIVDLRNPQQGFPLARLRKRRIIYHGGPTNSGKTYQAIERLKKAGANRQPGDGPAGLFCGPLRLLALEVYEQLNSQGVYCSLMTGQEKREVPFATHVSCTIEMASTVNEYEVAVIDEIQMLADEQRGPSWTSAVLGLNCPEIHVCGGMEGAVLVEAMAKETGDDFELREYQRKTELVCAEESLGNNYKNIQPGDAVVAFSRKDIFSIKKEIESKTPHKCCVIYGSLPQETRAHQARLFNSEDTGYDVLVASDAIGMGLNLNIRRVVFHAVSKRTGGGRAAVKLPPTMLKQIGGRAGRHGKQWEYGEVTCLRSTDMAYMNKIMNTPLEPIPKAAIFPSVQHMQEFSNSLDETEAAKPEGQERRRLAETFAAFADKAKVGDRYFLGTHDQHQALANALHPVENLTLKERYAISMAPINGRNALLVRAIFLFATAHAAGLPVFINMQLP 1038
            +  + DLR P + +P A   KRRIIYH GPTNSGKT+QA+ERLK+AG      DG  G++CGPLRLLALE+YE++NS G+Y SL+TGQEK+ VP++THVSCT+EMA+    ++VAVIDEIQ++ D QRG +WT A+ GL   EIHVCG  E   LV+  A+ TGD+FELR Y+R++ L  +   L  NY NI+ GD VVAFSR+DIF IK++IE KT  KCC+IYG LP ETR+ QARLFN  +  +++LVASDA+GMGLNLNIRRVVF  V K +GG    V +P ++ KQI GRAGR+G  +  GE TCL   D+ Y+ +  +    P+  A +FPS + M+EF+  L               LA+    +   A++   YF+  H   +  A  L   E LTL +R+   M+P++ RN L  +    +A AH+ G  V +++ LP
Sbjct:   93 LQQLTDLRLPHEMYPYATAMKRRIIYHEGPTNSGKTHQALERLKQAGE-----DG--GIYCGPLRLLALEIYERMNSDGLYTSLVTGQEKKIVPYSTHVSCTVEMANINRPWDVAVIDEIQLIGDPQRGWAWTRALFGLQAKEIHVCGSGEAVHLVKKFAETTGDEFELRSYERRSPLEISTTHL-KNYSNIRSGDCVVAFSRRDIFQIKRDIEIKTGQKCCIIYGQLPPETRSQQARLFNDRNNDFNILVASDAVGMGLNLNIRRVVFATVKKYSGGSGGMVDIPASLAKQIAGRAGRYGSDFASGEATCLLEEDLEYLKESYDEVPTPLTSAGLFPSSEQMEEFAKQLPGITD----------LADLVDKYVMLARLDGDYFMCNHQDMKDAATLLRDTE-LTLSDRFTFCMSPVSLRNPLARKVFLEYARAHSLGQSVKLDIYLP 521          
BLAST of mRNA_E-siliculosus-1a_F_contig1218.1381.1 vs. uniprot
Match: A0A3R7GQW8_9STRA (RNA helicase n=4 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7GQW8_9STRA)

HSP 1 Score: 413 bits (1062), Expect = 2.040e-127
Identity = 217/450 (48.22%), Postives = 290/450 (64.44%), Query Frame = 0
Query:  589 KRMDSIVDLRNPQQGFPLARLRKRRIIYHGGPTNSGKTYQAIERLKKAGANRQPGDGPAGLFCGPLRLLALEVYEQLNSQGVYCSLMTGQEKREVPFATHVSCTIEMASTVNEYEVAVIDEIQMLADEQRGPSWTSAVLGLNCPEIHVCGGMEGAVLVEAMAKETGDDFELREYQRKTELVCAEESLGNNYKNIQPGDAVVAFSRKDIFSIKKEIESKTPHKCCVIYGSLPQETRAHQARLFNSEDTGYDVLVASDAIGMGLNLNIRRVVFHAVSKRTGGGRAAVKLPPTMLKQIGGRAGRHGKQWEYGEVTCLRSTDMAYMNKIMNTPLEPIPKAAIFPSVQHMQEFSNSLDETEAAKPEGQERRRLAETFAAFADKAKVGDRYFLGTHDQHQALANALHPVENLTLKERYAISMAPINGRNALLVRAIFLFATAHAAGLPVFINMQLP 1038
            K +  + DLR P + +P A   KR+IIYH GPTNSGKT+QA+ERLK+AG      DG  G++CGPLRLLALE++E+LNS G+Y SL+TGQEK+ VP+++HVSCT+EMA+    ++VAVIDEIQ++ D QRG +WT A+ GL   EIHVCG  E   LV+  A+ TGDDFELR Y+R++ L      L N+Y +I+PGD VVAFSR+DIF IK++IE KT  KCC+IYG LP ETR+ QARLFN     Y++LVASDA+GMGLNLNIRRVVF  V K +G     + +PP++ KQI GRAGR+G  +  G  TCL   D+ Y+ +       P+  A +FPS   M+EF+  L               LA+    +   A++   YF+  H   +  A  L   E LTL +R+   MAP++ RN L  +    +A AH+ G  V +++ LP
Sbjct:  106 KALSQLTDLRLPHEMYPFATAMKRKIIYHEGPTNSGKTHQALERLKQAGE-----DG--GIYCGPLRLLALEIFERLNSDGLYTSLVTGQEKKIVPYSSHVSCTVEMANINRPWDVAVIDEIQLIGDPQRGWAWTRALFGLQANEIHVCGSGEALPLVQKFAETTGDDFELRSYERRSPLEIDTAHL-NSYSHIRPGDCVVAFSRRDIFQIKRDIEIKTGQKCCIIYGQLPPETRSQQARLFNDRTNDYNILVASDAVGMGLNLNIRRVVFATVKKYSGSSGGMIDIPPSLAKQIAGRAGRYGSAYASGTATCLLKEDLEYLKESYEEVPTPLTSAGLFPSSDQMEEFAKQLPGITD----------LADLVDKYVMLARLDGDYFMCNHQDMKDAAKLLRDTE-LTLSDRFTFCMAPVSLRNPLARKVFLEYARAHSLGQSVKLDIYLP 536          
BLAST of mRNA_E-siliculosus-1a_F_contig1218.1381.1 vs. uniprot
Match: A0A0P1AZN5_PLAHL (RNA helicase n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AZN5_PLAHL)

HSP 1 Score: 410 bits (1053), Expect = 1.460e-126
Identity = 215/451 (47.67%), Postives = 290/451 (64.30%), Query Frame = 0
Query:  588 TKRMDSIVDLRNPQQGFPLARLRKRRIIYHGGPTNSGKTYQAIERLKKAGANRQPGDGPAGLFCGPLRLLALEVYEQLNSQGVYCSLMTGQEKREVPFATHVSCTIEMASTVNEYEVAVIDEIQMLADEQRGPSWTSAVLGLNCPEIHVCGGMEGAVLVEAMAKETGDDFELREYQRKTELVCAEESLGNNYKNIQPGDAVVAFSRKDIFSIKKEIESKTPHKCCVIYGSLPQETRAHQARLFNSEDTGYDVLVASDAIGMGLNLNIRRVVFHAVSKRTGGGRAAVKLPPTMLKQIGGRAGRHGKQWEYGEVTCLRSTDMAYMNKIMNTPLEPIPKAAIFPSVQHMQEFSNSLDETEAAKPEGQERRRLAETFAAFADKAKVGDRYFLGTHDQHQALANALHPVENLTLKERYAISMAPINGRNALLVRAIFLFATAHAAGLPVFINMQLP 1038
            T  +  + DLR P + +P A   KR+IIYH GPTNSGKT+QA+ERLK+AG      DG  G++CGPLRLLALE++++LN+ G+Y SL+TGQEK+ VP++THVSCT+EMA+    ++VAV+DEIQ++ D QRG +WT A  GL   EIHVCG  E   L++  A  TGDDFEL  Y R++ L  A + LG+ Y +IQPGD VVAFSR+DIF IK++IE KT  KCC+IYG LP ETR+HQARLFN     ++VLVASDAIGMGLNLNIRR+VF  V K +G G   + +PP + +QI GRAGR+   +  GE TCL   D+ YM +       P+  A IFP+ + M+EF+  L               LA+    +   A++   YF+  H   +  A  L   + LTL +R+   M+P++ RN L  +    +A AH+ G  V +++ LP
Sbjct:   89 TISLQQLTDLRLPHEMYPFATAMKRKIIYHEGPTNSGKTFQALERLKQAGE-----DG--GIYCGPLRLLALEIFDRLNTDGLYTSLVTGQEKKVVPYSTHVSCTVEMANINRRWDVAVLDEIQLIGDPQRGWAWTRAFFGLQANEIHVCGSGEAVDLIKKFAATTGDDFELCSYSRRSPLTLATKHLGS-YHHIQPGDCVVAFSRRDIFQIKRDIEIKTGLKCCIIYGQLPPETRSHQARLFNDRTNDFNVLVASDAIGMGLNLNIRRIVFATVKKYSGSG-GMIDIPPALARQIAGRAGRYNSDFASGEATCLLKEDLEYMKESYEEKPTPLSSAGIFPTSEQMEEFAKQLPGIS----------NLADLVDKYVMLARLDGAYFMCNHQDMKDAATLLQETD-LTLSDRFTFCMSPVSLRNPLARKVFLEYARAHSLGQSVKLDIYLP 519          
BLAST of mRNA_E-siliculosus-1a_F_contig1218.1381.1 vs. uniprot
Match: W2MTU1_PHYPR (RNA helicase n=10 Tax=Phytophthora TaxID=4783 RepID=W2MTU1_PHYPR)

HSP 1 Score: 413 bits (1061), Expect = 1.520e-126
Identity = 214/448 (47.77%), Postives = 294/448 (65.62%), Query Frame = 0
Query:  591 MDSIVDLRNPQQGFPLARLRKRRIIYHGGPTNSGKTYQAIERLKKAGANRQPGDGPAGLFCGPLRLLALEVYEQLNSQGVYCSLMTGQEKREVPFATHVSCTIEMASTVNEYEVAVIDEIQMLADEQRGPSWTSAVLGLNCPEIHVCGGMEGAVLVEAMAKETGDDFELREYQRKTELVCAEESLGNNYKNIQPGDAVVAFSRKDIFSIKKEIESKTPHKCCVIYGSLPQETRAHQARLFNSEDTGYDVLVASDAIGMGLNLNIRRVVFHAVSKRTGGGRAAVKLPPTMLKQIGGRAGRHGKQWEYGEVTCLRSTDMAYMNKIMNTPLEPIPKAAIFPSVQHMQEFSNSLDETEAAKPEGQERRRLAETFAAFADKAKVGDRYFLGTHDQHQALANALHPVENLTLKERYAISMAPINGRNALLVRAIFLFATAHAAGLPVFINMQLP 1038
            +  + DLR P + +P A   KR+IIYH GPTNSGKT+QA+ERLK+AG      DG  G++CGPLRLLALE++E++N+ G+Y SL+TGQEK+ VP++THVSCT+EMA+    ++VAVIDEIQ++ D QRG +WT A+ GL   EIHVCG  E   LV+  A+ TGDDFELR Y+R++ L  A + LG+ Y +I+ GD VVAFSR+DIF IK++IE KT  KCC+IYG LP ETR+ QARLFN  +  +++LVASDA+GMGLNLNIRRVVF  V K +G     + +PP++ KQI GRAGR+G  +  GE TCL   D+ Y+ +  +    P+  A +FPS + M+EF+  L               LA+    +   A++   YF+  H   +  A  L   E LTL +R+   M+P++ RN L  +    +A AH+ G  V +++ LP
Sbjct:  178 LQQLTDLRLPHEMYPYATAMKRKIIYHEGPTNSGKTHQALERLKQAGE-----DG--GIYCGPLRLLALEIFERMNADGLYTSLVTGQEKKLVPYSTHVSCTVEMANINRPWDVAVIDEIQLIGDPQRGWAWTRALFGLQAKEIHVCGSGEAVHLVKKFAETTGDDFELRSYERRSPLEIAPKHLGS-YSHIRSGDCVVAFSRRDIFQIKRDIEIKTGQKCCIIYGQLPPETRSQQARLFNDRNNDFNILVASDAVGMGLNLNIRRVVFATVKKYSGSSGGMIDIPPSLAKQIAGRAGRYGSDFASGEATCLLEEDLGYLKESYDEVPTPLTSAGLFPSSEQMEEFAKQLPGITD----------LADLVDKYVMLARLDGDYFMCNHQDMKDAATLLRDTE-LTLSDRFTFCMSPVSLRNPLARKVFLEYARAHSLGQSVKLDIYLP 606          
BLAST of mRNA_E-siliculosus-1a_F_contig1218.1381.1 vs. uniprot
Match: H3H1H3_PHYRM (RNA helicase n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H1H3_PHYRM)

HSP 1 Score: 416 bits (1069), Expect = 1.600e-126
Identity = 216/448 (48.21%), Postives = 294/448 (65.62%), Query Frame = 0
Query:  591 MDSIVDLRNPQQGFPLARLRKRRIIYHGGPTNSGKTYQAIERLKKAGANRQPGDGPAGLFCGPLRLLALEVYEQLNSQGVYCSLMTGQEKREVPFATHVSCTIEMASTVNEYEVAVIDEIQMLADEQRGPSWTSAVLGLNCPEIHVCGGMEGAVLVEAMAKETGDDFELREYQRKTELVCAEESLGNNYKNIQPGDAVVAFSRKDIFSIKKEIESKTPHKCCVIYGSLPQETRAHQARLFNSEDTGYDVLVASDAIGMGLNLNIRRVVFHAVSKRTGGGRAAVKLPPTMLKQIGGRAGRHGKQWEYGEVTCLRSTDMAYMNKIMNTPLEPIPKAAIFPSVQHMQEFSNSLDETEAAKPEGQERRRLAETFAAFADKAKVGDRYFLGTHDQHQALANALHPVENLTLKERYAISMAPINGRNALLVRAIFLFATAHAAGLPVFINMQLP 1038
            +  + DLR P + +P A   KR+IIYH GPTNSGKT+QA+ERLK+AG      DG  G++CGPLRLLALE++E++N+ G+Y SL+TGQEK+ VP+A+HVSCT+EMA+    ++VAVIDEIQ++ D QRG +WT A+ GL   EIHVCG  E   LV+  A+ TGD+FELR Y+R++ L  A + LG+ Y +I+PGD VVAFSR+DIF IK++IE KT  KCC+IYG LP ETR+ QARLFN     Y++LVASDA+GMGLNLNIRRVVF  V K +GGG   + +P ++ KQI GRAGR+G  +  GE TCL   D+ Y+    +    P+  A +FPS + M+EF+  L               LA+    +   A++   YF+  H   +  A  L   E LTL +R+   M+P++ RN L  +    +A AH+ G  V +++ LP
Sbjct:  278 LQQLTDLRLPHEMYPFATAMKRKIIYHEGPTNSGKTHQALERLKEAGE-----DG--GIYCGPLRLLALEIFERMNTDGLYTSLVTGQEKKIVPYASHVSCTVEMANINRPWDVAVIDEIQLIGDPQRGWAWTRALFGLQAKEIHVCGSGEAVHLVKKFAETTGDEFELRSYERRSPLEIAPKHLGS-YSHIRPGDCVVAFSRRDIFQIKRDIEIKTGEKCCIIYGQLPPETRSQQARLFNDRSNDYNILVASDAVGMGLNLNIRRVVFATVKKYSGGGGGMIDIPASLAKQIAGRAGRYGSDFPSGEATCLLEEDLEYLKSSYDEVPTPLTSAGLFPSSEQMEEFAKQLPGITD----------LADLVDKYVMLARLDGDYFMCNHQDMKDAATLLRDTE-LTLSDRFMFCMSPVSLRNPLARKVFLEYARAHSLGQSVKLDIYLP 706          
BLAST of mRNA_E-siliculosus-1a_F_contig1218.1381.1 vs. uniprot
Match: A0A1J3E5A9_NOCCA (RNA helicase (Fragment) n=1 Tax=Noccaea caerulescens TaxID=107243 RepID=A0A1J3E5A9_NOCCA)

HSP 1 Score: 407 bits (1046), Expect = 1.700e-126
Identity = 212/476 (44.54%), Postives = 293/476 (61.55%), Query Frame = 0
Query:  563 DVVEKGLIPRLVELAQESYPDEIEATKRMDSIVDLRNPQQGFPLARLRKRRIIYHGGPTNSGKTYQAIERLKKAGANRQPGDGPAGLFCGPLRLLALEVYEQLNSQGVYCSLMTGQEKREVPFATHVSCTIEMASTVNEYEVAVIDEIQMLADEQRGPSWTSAVLGLNCPEIHVCGGMEGAVLVEAMAKETGDDFELREYQRKTELVCAEESLGNNYKNIQPGDAVVAFSRKDIFSIKKEIESKTPHKCCVIYGSLPQETRAHQARLFNSEDTGYDVLVASDAIGMGLNLNIRRVVFHAVSKRTGGGRAAVKLPPTMLKQIGGRAGRHGKQWEYGEVTCLRSTDMAYMNKIMNTPLEPIPKAAIFPSVQHMQEFSNSLDETEAAKPEGQERRRLAETFAAFADKAKVGDRYFLGTHDQHQALANALHPVENLTLKERYAISMAPINGRNALLVRAIFLFATAHAAGLPVFINMQLP 1038
            D   K L P  VE   E +PDEI+  K +    DL  P   FP AR  KR+I+YH GPTNSGKTY A++R  +A           GL+C PLRLLA+EV++++N+ G+YCSL+TGQEK+ VPF+ HVSCT+EM ST   YEVAVIDEIQM+AD  RG +WT A+LGL   EIH+CG      +V  M  +TGD+     Y+R   LV   ++L  + KNI+ GD VVAFSR++IF +K  IE  T H+CCVIYG+LP ETR  QA LFN +D  YDVLVASDA+GMGLNLNIRRVVF++++K  G     V +P + +KQI GRAGR G ++  G  T L   D++Y+ + +  P + + K  +FP  + ++ F+  + +   +K               F    ++   YFL  HD  + +AN L  VE L+L++R+    AP+N RN   +  ++ FA+ ++  +PV + M +P
Sbjct:   31 DEAVKFLFPVFVEFCIEEFPDEIKRFKSVVDSADLTKPATWFPFARAMKRKIVYHCGPTNSGKTYNALQRFMEA---------KNGLYCSPLRLLAMEVFDKVNALGIYCSLLTGQEKKHVPFSNHVSCTVEMVSTDELYEVAVIDEIQMMADPSRGHAWTKALLGLKADEIHLCGDPSVLEIVRKMCADTGDELVEEHYERFKPLVVEGKTLLGDLKNIKSGDCVVAFSRREIFEVKMAIEKHTKHRCCVIYGALPPETRRQQANLFNDQDNEYDVLVASDAVGMGLNLNIRRVVFYSLNKYNGD--KHVPVPASQVKQIAGRAGRRGSRYPDGLTTTLHLEDLSYLIECLQQPFDEVKKVGLFPFFEQLELFAAKVPDMAFSK-----------LLDHFGKNCRLDGSYFLCRHDHVKKVANMLEKVEGLSLEDRFNFCFAPVNVRNPKAMYHLYRFASTYSQDMPVNVAMGMP 484          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1218.1381.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LD59_ECTSI0.000e+087.40RNA helicase n=1 Tax=Ectocarpus siliculosus TaxID=... [more]
A0A6H5K988_9PHAE5.410e-31485.86RNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
D8LD58_ECTSI4.510e-15990.51ATP-dependent RNA and DNA helicase, putative n=1 T... [more]
A0A7S3UVF2_HETAK6.020e-13346.83RNA helicase n=2 Tax=Heterosigma akashiwo TaxID=28... [more]
G4YHR7_PHYSP2.380e-12848.44RNA helicase n=5 Tax=Phytophthora TaxID=4783 RepID... [more]
A0A3R7GQW8_9STRA2.040e-12748.22RNA helicase n=4 Tax=Phytophthora kernoviae TaxID=... [more]
A0A0P1AZN5_PLAHL1.460e-12647.67RNA helicase n=1 Tax=Plasmopara halstedii TaxID=47... [more]
W2MTU1_PHYPR1.520e-12647.77RNA helicase n=10 Tax=Phytophthora TaxID=4783 RepI... [more]
H3H1H3_PHYRM1.600e-12648.21RNA helicase n=1 Tax=Phytophthora ramorum TaxID=16... [more]
A0A1J3E5A9_NOCCA1.700e-12644.54RNA helicase (Fragment) n=1 Tax=Noccaea caerulesce... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001650Helicase, C-terminalSMARTSM00490helicmild6coord: 797..891
e-value: 3.9E-15
score: 66.3
IPR001650Helicase, C-terminalPFAMPF00271Helicase_Ccoord: 784..891
e-value: 6.4E-11
score: 42.6
IPR001650Helicase, C-terminalPROSITEPS51194HELICASE_CTERcoord: 774..929
score: 11.116
IPR041082Suv3, C-terminal domain 1PFAMPF18147Suv3_C_1coord: 983..1026
e-value: 2.5E-11
score: 43.3
NoneNo IPR availableGENE3D3.40.50.300coord: 764..918
e-value: 7.9E-141
score: 471.3
NoneNo IPR availableGENE3D3.40.50.300coord: 600..763
e-value: 7.9E-141
score: 471.3
NoneNo IPR availableGENE3D1.20.272.40coord: 594..1002
e-value: 7.9E-141
score: 471.3
NoneNo IPR availablePANTHERPTHR12131:SF1ATP-DEPENDENT RNA HELICASE SUPV3L1, MITOCHONDRIALcoord: 557..1033
NoneNo IPR availablePANTHERPTHR12131ATP-DEPENDENT RNA AND DNA HELICASEcoord: 557..1033
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 1013..1033
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..1012
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1034..1058
IPR014001Helicase superfamily 1/2, ATP-binding domainPROSITEPS51192HELICASE_ATP_BIND_1coord: 606..729
score: 9.22
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 609..906

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1218contigE-siliculosus-1a_F_contig1218:16849..32152 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1218.1381.1mRNA_E-siliculosus-1a_F_contig1218.1381.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1218 16717..32152 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1218.1381.1 ID=prot_E-siliculosus-1a_F_contig1218.1381.1|Name=mRNA_E-siliculosus-1a_F_contig1218.1381.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=1058bp
MLAARRTYGLGRSTLSSSAVAVSRCSRLGALAHATTTRCRSTRIGSIPQV
LAARQQHFSGGSAPGADSLSSSPDVGLGRPAGGGRRPAQLARREGKTEWV
RYQNMMHQRTGLARRGQLSSLRGGVVGPSVNNDAGSGGVETSADSGAAAA
AAGAAEANEPDMATPTAAGSSVTLSPPATMATTSSESTAVIDEWSTSNSS
DSRPSSDELHATTNMTARGGPGPDDGDLAASDTVLPIATTTRQETSSRIS
SEDAVITDVDSRREAALNAELERKFGTEPPQREEISGKPRRRRSRGRDRR
GAARAVEGSANELRHEPPAAVSGGGGTAPAAESEIGELNEVPVGEAAGLI
TGMSGDGTEPASGEGAPRSKSADESRLGRRNRRGGHATGDGRGGGSLGRG
GRGKQAAAASEEGGGGGGGEGSGDSYSQQQGSAWKNIHAKKKLRWLLKGL
ASDYGVQEMLARHHISKASLLTRISCRQHTMSKLLRVFEDLVLDDPDTAF
PGEAGQKVQEEVSSLCYHPKFQADAVLMKRPIRTRTTSGRSFTFSSKQPK
RGHEGPFVKERNDVVEKGLIPRLVELAQESYPDEIEATKRMDSIVDLRNP
QQGFPLARLRKRRIIYHGGPTNSGKTYQAIERLKKAGANRQPGDGPAGLF
CGPLRLLALEVYEQLNSQGVYCSLMTGQEKREVPFATHVSCTIEMASTVN
EYEVAVIDEIQMLADEQRGPSWTSAVLGLNCPEIHVCGGMEGAVLVEAMA
KETGDDFELREYQRKTELVCAEESLGNNYKNIQPGDAVVAFSRKDIFSIK
KEIESKTPHKCCVIYGSLPQETRAHQARLFNSEDTGYDVLVASDAIGMGL
NLNIRRVVFHAVSKRTGGGRAAVKLPPTMLKQIGGRAGRHGKQWEYGEVT
CLRSTDMAYMNKIMNTPLEPIPKAAIFPSVQHMQEFSNSLDETEAAKPEG
QERRRLAETFAAFADKAKVGDRYFLGTHDQHQALANALHPVENLTLKERY
AISMAPINGRNALLVRAIFLFATAHAAGLPVFINMQLPPKGTLPKSVRLF
FELSSLHN
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR014001Helicase_ATP-bd
IPR041082Suv3_C_1
IPR001650Helicase_C