prot_E-siliculosus-1a_F_contig1216.1377.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1216.1377.1
Unique Nameprot_E-siliculosus-1a_F_contig1216.1377.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length234
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig1216.1377.1 vs. uniprot
Match: A0A6H5L4I8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4I8_9PHAE)

HSP 1 Score: 243 bits (621), Expect = 4.510e-78
Identity = 207/232 (89.22%), Postives = 208/232 (89.66%), Query Frame = 0 
Query:    1 MVPGAGVARHGKRKAEHERNASASKKAMEAYYGQAGHAGVVAGGGRSCGGDNSGEEATDDESEFSSVDGRTSPSQQPGAWGAAPPPQPGMGVHFSPEAHGFAAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWSAYGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDARKASRGGGRPEGDEWGWFVDAGEQEQQQAHPGQWGVRRSA 232
            MVPGAGV RHGKRKAEHERNASASKK MEAYYG AGHAGVVAGGGRS GGDNSGEEATDDESEFSSVDGRTSP+QQPG WGAAP PQPGMGV FSPEAHG AA  XXXXXXXXXXXXXXXXXXXXXXX            WSAYG  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDARKASRGGGRPEGDEWGWFVDAGEQEQQQAHPGQWGVRRSA
Sbjct:    1 MVPGAGVVRHGKRKAEHERNASASKKVMEAYYGHAGHAGVVAGGGRSSGGDNSGEEATDDESEFSSVDGRTSPAQQPGTWGAAPRPQPGMGVRFSPEAHGPAAXXXXXXXXXXXXXXXXXXXXXXXXXTLGSAGASNCNGWSAYGGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDARKASRGGGRPEGDEWGWFVDAGEQEQQQAHPGQWGVRRSA 232
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BLAST of mRNA_E-siliculosus-1a_F_contig1216.1377.1 vs. uniprot
Match: D7G7Z4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7Z4_ECTSI)

HSP 1 Score: 187 bits (476), Expect = 2.670e-57
Identity = 99/105 (94.29%), Postives = 100/105 (95.24%), Query Frame = 0 
Query:    1 MVPGAGVARHGKRKAEHERNASASKKAMEAYYGQAGHAGVVAGGGRSCGGDNSGEEATDDESEFSSVDGRTSPSQQPGAWGAAPPPQPGMGVHFSPEAHGFAAAA 105
            MVPGAGV+RHGKRKAEHERNASASKKAMEAYYG AGHAGV AGGGRS GGDNSGEEATDDESEFSSVDGRTSPSQQPGAWG APPPQPGMGVHFSPEAH FAAAA
Sbjct:    1 MVPGAGVSRHGKRKAEHERNASASKKAMEAYYGHAGHAGVAAGGGRSSGGDNSGEEATDDESEFSSVDGRTSPSQQPGAWGVAPPPQPGMGVHFSPEAHDFAAAA 105
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1216.1377.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L4I8_9PHAE4.510e-7889.22Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G7Z4_ECTSI2.670e-5794.29Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1216contigE-siliculosus-1a_F_contig1216:33034..33735 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1216.1377.1mRNA_E-siliculosus-1a_F_contig1216.1377.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1216 31270..34504 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1216.1377.1 ID=prot_E-siliculosus-1a_F_contig1216.1377.1|Name=mRNA_E-siliculosus-1a_F_contig1216.1377.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=234bp
MVPGAGVARHGKRKAEHERNASASKKAMEAYYGQAGHAGVVAGGGRSCGG
DNSGEEATDDESEFSSVDGRTSPSQQPGAWGAAPPPQPGMGVHFSPEAHG
FAAAAAAAGFNNVQAAHAFQQQMAGGASSLGSAGASNSDGWSAYGGVGGG
GGGGGGHSSRLQQQQQAQLEQQYRQQQLLMYQQQQQQQQVDARKASRGGG
RPEGDEWGWFVDAGEQEQQQAHPGQWGVRRSAH*
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