prot_E-siliculosus-1a_F_contig1211.1345.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1211.1345.1
Unique Nameprot_E-siliculosus-1a_F_contig1211.1345.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length682
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1211.1345.1 vs. uniprot
Match: D7FTS5_ECTSI (Glycos_transf_1 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTS5_ECTSI)

HSP 1 Score: 1081 bits (2795), Expect = 0.000e+0
Identity = 610/666 (91.59%), Postives = 621/666 (93.24%), Query Frame = 0
Query:    1 MLQDGSGAGIRAEESRLFGLLDKVIAVGAPCRTLLTADYGVREEAIVVVEPTFAALAPNVAVAXXXXXXXXXXXXIEAGVVPPAAWVDISNERPPRFVSVGTLCPRKGQLGLIAALRAACASQPEQLGGSVLTLIGGEGADPSYAEAVRAAAXXXXXXXAGDESRGVAKGEGPGRLEVRLLGPLPREETLEHVGASDAFLLNSCSESWAVAPVEAALRGVPVLSTRVGWLAQSLPADSTIWVGSGRAGRGHDSDGGGGIVAGGDGVGLASAAEWGQALLRFAHARQRLRIEAERAVPGLAERFCRAVAADTRGEAVRTLMETTTGRRCTRACCSHSHLLGGYELSNGPADPSTNTITAVTDQERVRRATVNNALACVCATCVSISGAGGAAAGLAALVAAQCLLLVGLAPPCSPANLVTVFRSFIPPAVVWFMAGSDFGQQVSMADVTVFGVLFVLLDVADGILARRSKSGPTRVGAALDVESDSIAVLFLSLAASRKAWRGGFIAGVLRYLFVLATDARELPPSPIGPAGRWVAKIAALASVAALAASVGNGAVRNGGGXXGDADTAAFEGTGGEGWWVRGGAEGSSPLLCAVGVAVLCASFSIDFFQIWVLLPREEAXXXXXXXXXXXXXXXXXXVTNETVGNGGVLGGAEEAPSTKAIAAIGE 666
            MLQD SGAGIRAEE RLFGLLDKVIAVGAPCRTLLTADYGVREEAIVVVEPTF A+APNVAVA  XXXXXXXXXXIEAGVVPPAA VD+SNERPPRFVSVGTLCPRKGQLGLIAALRAACASQP +LGGSVLTLIGGEGADPSYAEAVRAAA       AGDESRG AK EGPGRLEVRLLGPLPREETLEHVGASDAFLLNSCSESWAVAPVEAALRGVPVLSTRVGWLAQSLPA+STIWVGSGR GRG DSDGGGGIVAGGDGVGLASA EWGQALLRFAHARQRLRIEAERAVPGLAERFCRAVAADTRG+AVRTLMETTTG RCTRA C  S+LLGG+ELSNGP DPST TI AVTDQERVRRATVNNALACVCATCVSISGAGGAA GLAALVAAQCLLLVGLAPPCSPANLVTVFRSFIPPAVVWFMAGSDFGQ VSMADVTVFGVLFVLLDVADGILARRSKSGPTRVGAALDVESDSIAVLFLSLAAS+KAWRGGFIAGVLRYLFVLATDARELPPSPIGPAGRWVAKIAALASVAALAASVGNGA+RNGGG  GDADTA FE TGG GWWVRGGAEGSSPLLCAVGVAVLCASFSIDFFQIWVLLPREEA XXXXXXXX         VTNETVGNG VLGGA+E PSTKAIAA+GE
Sbjct:  154 MLQDESGAGIRAEERRLFGLLDKVIAVGAPCRTLLTADYGVREEAIVVVEPTFTAVAPNVAVAASXXXXXXXXXXIEAGVVPPAASVDVSNERPPRFVSVGTLCPRKGQLGLIAALRAACASQPIKLGGSVLTLIGGEGADPSYAEAVRAAAATAG---AGDESRGGAKVEGPGRLEVRLLGPLPREETLEHVGASDAFLLNSCSESWAVAPVEAALRGVPVLSTRVGWLAQSLPAESTIWVGSGREGRGPDSDGGGGIVAGGDGVGLASATEWGQALLRFAHARQRLRIEAERAVPGLAERFCRAVAADTRGQAVRTLMETTTGTRCTRASCGRSNLLGGFELSNGPTDPSTTTIPAVTDQERVRRATVNNALACVCATCVSISGAGGAAVGLAALVAAQCLLLVGLAPPCSPANLVTVFRSFIPPAVVWFMAGSDFGQ-VSMADVTVFGVLFVLLDVADGILARRSKSGPTRVGAALDVESDSIAVLFLSLAASQKAWRGGFIAGVLRYLFVLATDARELPPSPIGPAGRWVAKIAALASVAALAASVGNGALRNGGGG-GDADTAVFERTGGRGWWVRGGAEGSSPLLCAVGVAVLCASFSIDFFQIWVLLPREEAAXXXXXXXXA--------VTNETVGNGSVLGGADETPSTKAIAAVGE 806          
BLAST of mRNA_E-siliculosus-1a_F_contig1211.1345.1 vs. uniprot
Match: UPI0007320A72 (glycosyltransferase family 4 protein n=1 Tax=Thiohalocapsa sp. ML1 TaxID=1431688 RepID=UPI0007320A72)

HSP 1 Score: 66.6 bits (161), Expect = 4.640e-8
Identity = 60/186 (32.26%), Postives = 83/186 (44.62%), Query Frame = 0
Query:   76 IEAGVVPPAAWVDISNERPPRFVSVGTLCPRKGQLGLIAAL--------RAACASQPEQLGGSVLTLIGGEGADPSYAEAVRAAAXXXXXXXAGDESRGVAKGEGPGRLEVRLLGPLPREETLEHVGASDAFLLNSCSESWAVAPVEAALRGVPVLSTRVGWLAQSLPADSTIWVGSGRAGRGHDS 253
            +E G  P    +    + P R V+VGT+ PRKG L LI AL        R  CA   ++              DP+ A A+RA            E+ G+ +        VRLLG LP      H   +D F+L S  E + +A  EA  RG+PVL T  G +A ++PAD+ + V  G     HD+
Sbjct:  152 VEPGTEPAPLAMGSGGDGPLRLVAVGTVTPRKGHLLLIEALGRLRHLDWRLDCAGSLDR--------------DPTTAAALRARI----------EALGLGE-------RVRLLGELPPAALEPHYARADLFVLASLFEGYGMAYAEALARGLPVLGTTGGAIADTVPADAGLLVPPGDVEALHDA 306          
BLAST of mRNA_E-siliculosus-1a_F_contig1211.1345.1 vs. uniprot
Match: A0A840P3C8_9ACTN (Phosphatidylglycerophosphate synthase n=1 Tax=Thermocatellispora tengchongensis TaxID=1073253 RepID=A0A840P3C8_9ACTN)

HSP 1 Score: 62.8 bits (151), Expect = 3.080e-7
Identity = 57/165 (34.55%), Postives = 82/165 (49.70%), Query Frame = 0
Query:  385 SGAGGAAAGLAALVAAQCLLLVGLAPPCSPANLVTVFRSFIPPAVVWFMAGSDFGQQVSMADVTVFGVLFVLLDVADGILARRSKSGPTRVGAALDVESDSIAVLFLSLAASRKAWRGGFIAGVLRYLFVLATDARELPPSPIGP--AGRWVAKIAALASVAALA 547
            +GAG AAA  A LV A   LL        PA +VT+ R+ +   V   +  + F   V  A +   G   +LLD ADG +ARR+ +  T +GA  D+E D+  +L LS  A+  A       G++RY +V A  A     +P+ P  A + VA +  +  VAA A
Sbjct:   43 AGAGYAAALSALLVRA---LLRSGERSLGPAGIVTLVRAELAGGVTALVVSAAFAPGVPRAPIVALGAAVLLLDWADGQVARRTGT-ETALGARFDMEVDAFLILVLSAYAAASAGPWALAIGLMRYAWVAAGRAAPWLRAPLPPSLARKAVAAVQGIVLVAAAA 203          
BLAST of mRNA_E-siliculosus-1a_F_contig1211.1345.1 vs. uniprot
Match: A0A7V2RTH2_9PROT (Glycosyltransferase n=1 Tax=Rhodospirillales bacterium TaxID=2026786 RepID=A0A7V2RTH2_9PROT)

HSP 1 Score: 58.9 bits (141), Expect = 1.450e-5
Identity = 67/220 (30.45%), Postives = 90/220 (40.91%), Query Frame = 0
Query:   23 KVIAVGAPCRTLLTADYGVREEAIVVVEPTFAALAPNVAVAXXXXXXXXXXXXIEAGVVPPAAWVDISNERPPRFVSVGTLCPRKGQLGLIAALRAACASQPEQLGGSVLTLIGGEGADPSYAEAVRAAAXXXXXXXAGDESRGVAKGEGPGRLEVRLLGPLPREETLEHVGASDAFLLNSCSESWAVAPVEAALRGVPVLSTRVGWLAQSLPADSTIWV 242
            +VI   A  R +L  ++ V    I V EP      P                       P +AW       PPR +SV +L PRK  L LI AL A  A  P +L      ++G    DP  A AVR A               +A G G     V  +G    EE       +D F+  S  E + +A +EA  RG+PV++TR G +A+ LP D+ I V
Sbjct:  127 RVIVTSATTREVLVREFAVPIHRITVAEPGIDPAEP----------------------APGSAW------NPPRLLSVASLTPRKDHLTLIRAL-AHIADLPWRL-----DIVGSATRDPVTARAVREAV--------------IAFGFGH---RVVFVGECQGEELEAAWRPADLFVSASRYEGYGMALMEAVARGLPVVATRGGAVAEVLPPDAAILV 295          
BLAST of mRNA_E-siliculosus-1a_F_contig1211.1345.1 vs. uniprot
Match: A0A8J3ZUK0_9ACTN (Membrane protein n=2 Tax=Virgisporangium ochraceum TaxID=65505 RepID=A0A8J3ZUK0_9ACTN)

HSP 1 Score: 56.6 bits (135), Expect = 6.020e-5
Identity = 40/106 (37.74%), Postives = 63/106 (59.43%), Query Frame = 0
Query:  414 PANLVTVFRSFIPPAVVWFMAGSDFGQQVSMADVTVFGVLFVLLDVADGILARRSKSGPTRVGAALDVESDSIAVLFLSLAASRKAWRGGFIA--GVLRYLFVLAT 517
            PAN VT+ R+     V   +A +  G+ V +A + V   + +LLD ADG +ARR+ S  T +GA  D+E D+  +L LS+  ++  + GG++   G LRY+FV A+
Sbjct:  103 PANAVTLTRATFVGGVAAIVADTA-GRAVPVAALAVLASVALLLDAADGFVARRTGSS-TALGARFDMEVDAFLILVLSVFVAQ--FLGGWVLAIGALRYVFVAAS 204          
BLAST of mRNA_E-siliculosus-1a_F_contig1211.1345.1 vs. uniprot
Match: A0A3N5GNP8_9BURK (Glycosyltransferase family 1 protein n=1 Tax=Burkholderiales bacterium TaxID=1891238 RepID=A0A3N5GNP8_9BURK)

HSP 1 Score: 57.0 bits (136), Expect = 6.220e-5
Identity = 49/146 (33.56%), Postives = 70/146 (47.95%), Query Frame = 0
Query:   97 FVSVGTLCPRKGQLGLIAALRAACASQPEQLGGSVLTLIGGEGADPSYAEAVRAAAXXXXXXXAGDESRGVAKGEGPGRLEVRLLGPLPREETLEHVGASDAFLLNSCSESWAVAPVEAALRGVPVLSTRVGWLAQSLPADSTIWV 242
             + V TL PRKG L L+ AL      +        L  +G    DPS+A AV A            E+  +A+        V + G L R     H+  +DAF+L S  E + +A  EA  RG+PV+ TRVG +AQ++PA + + V
Sbjct:  181 LLCVATLTPRKGHLQLLDALWRVRDRR------WTLHCVGSAMRDPSHARAVAARI----------EALALAE-------RVTIEGELDRASLDRHLAQADAFVLASVYEGYGMAFAEALARGLPVIGTRVGAIAQTVPACAGLLV 303          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1211.1345.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D7FTS5_ECTSI0.000e+091.59Glycos_transf_1 domain-containing protein n=2 Tax=... [more]
UPI0007320A724.640e-832.26glycosyltransferase family 4 protein n=1 Tax=Thioh... [more]
A0A840P3C8_9ACTN3.080e-734.55Phosphatidylglycerophosphate synthase n=1 Tax=Ther... [more]
A0A7V2RTH2_9PROT1.450e-530.45Glycosyltransferase n=1 Tax=Rhodospirillales bacte... [more]
A0A8J3ZUK0_9ACTN6.020e-537.74Membrane protein n=2 Tax=Virgisporangium ochraceum... [more]
A0A3N5GNP8_9BURK6.220e-533.56Glycosyltransferase family 1 protein n=1 Tax=Burkh... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.2000coord: 87..295
e-value: 2.2E-18
score: 68.5
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 409..414
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..385
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 639..681
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 436..446
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 386..408
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 415..435
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 590..613
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 447..465
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 619..638
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 614..618
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 466..589
NoneNo IPR availableSUPERFAMILY53756UDP-Glycosyltransferase/glycogen phosphorylasecoord: 11..303

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1211contigE-siliculosus-1a_F_contig1211:6521..9821 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1211.1345.1mRNA_E-siliculosus-1a_F_contig1211.1345.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1211 5564..11732 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1211.1345.1 ID=prot_E-siliculosus-1a_F_contig1211.1345.1|Name=mRNA_E-siliculosus-1a_F_contig1211.1345.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=682bp
MLQDGSGAGIRAEESRLFGLLDKVIAVGAPCRTLLTADYGVREEAIVVVE
PTFAALAPNVAVAASASAAAAAAAAIEAGVVPPAAWVDISNERPPRFVSV
GTLCPRKGQLGLIAALRAACASQPEQLGGSVLTLIGGEGADPSYAEAVRA
AAAAAATAGAGDESRGVAKGEGPGRLEVRLLGPLPREETLEHVGASDAFL
LNSCSESWAVAPVEAALRGVPVLSTRVGWLAQSLPADSTIWVGSGRAGRG
HDSDGGGGIVAGGDGVGLASAAEWGQALLRFAHARQRLRIEAERAVPGLA
ERFCRAVAADTRGEAVRTLMETTTGRRCTRACCSHSHLLGGYELSNGPAD
PSTNTITAVTDQERVRRATVNNALACVCATCVSISGAGGAAAGLAALVAA
QCLLLVGLAPPCSPANLVTVFRSFIPPAVVWFMAGSDFGQQVSMADVTVF
GVLFVLLDVADGILARRSKSGPTRVGAALDVESDSIAVLFLSLAASRKAW
RGGFIAGVLRYLFVLATDARELPPSPIGPAGRWVAKIAALASVAALAASV
GNGAVRNGGGGGGDADTAAFEGTGGEGWWVRGGAEGSSPLLCAVGVAVLC
ASFSIDFFQIWVLLPREEAAAAAAAAAAAAAAASASAVTNETVGNGGVLG
GAEEAPSTKAIAAIGEGVRGGRAPARTASAT*
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