prot_E-siliculosus-1a_F_contig121.1337.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig121.1337.1
Unique Nameprot_E-siliculosus-1a_F_contig121.1337.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length240
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig121.1337.1 vs. uniprot
Match: A0A6H5KZY0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZY0_9PHAE)

HSP 1 Score: 102 bits (253), Expect = 3.860e-21
Identity = 71/140 (50.71%), Postives = 80/140 (57.14%), Query Frame = 0 
Query:   15 MAVKATPGVDGMQVKKEEXXXXXXEIHEER-------SRPGKRKRGGMAEALQRYSFWTAGSRQPNALSPAGAPSKRQRKASSPGAKHAKPGMIYLVSKR----------------CGHPGCLKHPSHGKDGSKRPEFCA 131
            MA KATP VDGMQVK+E XXXXXX  ++ER        RPGKRKRGGMA ALQRYS WTAGSRQP A    GA +KRQR  SSPG K    G      ++                C   GC + PS+G   SK  EFC+
Sbjct:    1 MAAKATPSVDGMQVKEEXXXXXXXXDYDERLSDDPLQPRPGKRKRGGMANALQRYSIWTAGSRQPYAERLTGASAKRQRTTSSPGTKEQCGGRATAAPRKPPTRTTAGHRGKRPLFCQEDGCTRRPSYGNASSKTAEFCS 140
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BLAST of mRNA_E-siliculosus-1a_F_contig121.1337.1 vs. uniprot
Match: D7FTH3_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTH3_ECTSI)

HSP 1 Score: 70.1 bits (170), Expect = 6.950e-12
Identity = 29/32 (90.62%), Postives = 30/32 (93.75%), Query Frame = 0 
Query:  100 MIYLVSKRCGHPGCLKHPSHGKDGSKRPEFCA 131
            MI LVSKRCGHPGC+KHPSHGKDGSKRPE CA
Sbjct:    1 MIDLVSKRCGHPGCMKHPSHGKDGSKRPEICA 32
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BLAST of mRNA_E-siliculosus-1a_F_contig121.1337.1 vs. uniprot
Match: A0A6H5L8B4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8B4_9PHAE)

HSP 1 Score: 57.4 bits (137), Expect = 1.760e-6
Identity = 21/34 (61.76%), Postives = 30/34 (88.24%), Query Frame = 0 
Query:   93 AKHAKPGMIYLVSKRCGHPGCLKHPSHGKDGSKR 126
            ++HAKPGM  +++KRCGHPGC+KH ++GKDGS +
Sbjct:  109 SQHAKPGMTNIMTKRCGHPGCIKHRTYGKDGSSK 142
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig121.1337.1 vs. uniprot
Match: D7FHY3_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHY3_ECTSI)

HSP 1 Score: 56.6 bits (135), Expect = 1.090e-5
Identity = 22/33 (66.67%), Postives = 28/33 (84.85%), Query Frame = 0 
Query:   93 AKHAKPGMIYLVSKRCGHPGCLKHPSHGKDGSK 125
            +KH+KPGMI +V+KRCGHPGC+K PS+G  G K
Sbjct:   55 SKHSKPGMINVVNKRCGHPGCMKQPSYGNHGMK 87
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig121.1337.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5KZY0_9PHAE3.860e-2150.71Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FTH3_ECTSI6.950e-1290.63EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
A0A6H5L8B4_9PHAE1.760e-661.76Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FHY3_ECTSI1.090e-566.67EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 23..46

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig121contigE-siliculosus-1a_F_contig121:51371..62570 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig121.1337.1mRNA_E-siliculosus-1a_F_contig121.1337.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig121 51371..73018 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig121.1337.1 ID=prot_E-siliculosus-1a_F_contig121.1337.1|Name=mRNA_E-siliculosus-1a_F_contig121.1337.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=240bp
MSSAGLEFEIGDCAMAVKATPGVDGMQVKKEEEEQEQEEIHEERSRPGKR
KRGGMAEALQRYSFWTAGSRQPNALSPAGAPSKRQRKASSPGAKHAKPGM
IYLVSKRCGHPGCLKHPSHGKDGSKRPEFCAQHSQQGMVDVVTRRCDHPG
CMKRPSYGTDGSKKAEFCSQHRQQGMVDIVIRRCGHPGCTKGASYRKDGN
DKAEFCAQHSQPGMVNTAKKRCRHPDCSKRPSYGTDGSKK
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