prot_E-siliculosus-1a_F_contig1206.1319.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1206.1319.1
Unique Nameprot_E-siliculosus-1a_F_contig1206.1319.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length1179
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig1206.1319.1 vs. uniprot
Match: D8LI48_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LI48_ECTSI)

HSP 1 Score: 756 bits (1953), Expect = 9.370e-255
Identity = 848/982 (86.35%), Postives = 856/982 (87.17%), Query Frame = 0 
Query:  198 AAARQTEQKQKDYLHLIKAAGFRGKWREVAALVSEMGGKGVKGNVYIYNTAIAAMARCGRPREAEALLTVMLERDSIAPDTISXXXXXXXXXXXXXXXAARRLLGRMTELASSGALLHXXXXXXXXXXXXXXXXXXXXXXXXXXKTMAEAGVTPNIIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREMKLGVAGAASGXXXXXXXXXXXXXXXXXDVVSYASAITACARARRVDEALGLLSELRVNEAQAAAAAVRGGLRNGSGRRAGLPVPNVVAYSAGLFACLKAGDVARGAELLDEMIAAGLRPNKIHCDTMVAAWSAEGKPERAVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGINRRRYTDWAPELANIARLLQNGPDSHGGXXXXXXXXXXXXKAGADGXXXXXXXXXXXXXXXXXXXXX-PEELDCSIEALGDADDAGGATSLLRVMRREGFHASPRAYRSVVYACARVGLLDEAMTLAKEMQSXXXXXXXXXXXXXXXXXXXXXXXXXRPSSFNDDCEVENRNMAKETPADEPPALGDGASLGAVASFAERGLEEETEREAGNGGVASELVPRGVPSTGAASGEDCAEEGSLVASNDNSNSNLGAVNEDEDGAEFDLAMVYNCIICNFARAATGDGGGAGGVCDHRVGKAPAGASVLAVAEKAAAXXXXXXXXXXXXXXXXXXGRSGPGKDGGRAEARGGDVPGEGLVALLFGVAERAEGSLTDEAANGGVEIDHDEEVA 1178
            A+ RQTEQKQKDYLHLIKAAGFRG WREVAALVSEMGGKGV+GNVYIYNTAIAAMARCGRPREAEALLTVMLERDSIAPDTISXXXXXXXXXXXXXX AARRLLGRMTELAS GALLHXXXXXXXXXXXXXXXXXXXXXXXXXXK MAEAGVTPNIIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX         +EMKLGVAGAASG                 DVVSYASAITACARARRVDEALGLLSELRVNEAQAAAAA                                AGDVA GAELLDEMIAAGLRPNKIHCDTMVAAWSAEGKPERAVA  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGINRRRYTDWAPELANIARLLQNGP SHGGXXXXXXXXXXXX      XXXXXXXXXXXXXXXXXXXXX PEELDCSIEALGDADDAGGAT+LLRVMRREGFHASPRAYRSVVYACARVGLLDEAMTLAKEMQS                          PSSFNDDCEVENR++A+ET ADEPPALGDGASLGA ASFAERGLEEETEREA NGGVASELVPR VPSTGAASGEDC EEGSLVASND  N NLGAVNEDEDGAEFDLAMVYNCIICNFARAATGDGGGAGGVCDHRVG+APAGASVLAVAEKAAA                  GRSGPGKDGGRAEARGGDVPGEGLVALLFGVAERAEGSLTDEAANGGVEIDHDEEVA
Sbjct:   13 ASQRQTEQKQKDYLHLIKAAGFRGNWREVAALVSEMGGKGVEGNVYIYNTAIAAMARCGRPREAEALLTVMLERDSIAPDTISXXXXXXXXXXXXXXDAARRLLGRMTELASGGALLHXXXXXXXXXXXXXXXXXXXXXXXXXXKMMAEAGVTPNIIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDWTAAVQLLQEMKLGVAGAASGGAPGGGGTAGVEVAPPPDVVSYASAITACARARRVDEALGLLSELRVNEAQAAAAA--------------------------------AGDVACGAELLDEMIAAGLRPNKIHCDTMVAAWSAEGKPERAVALMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGINRRRYTDWAPELANIARLLQNGPGSHGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPEELDCSIEALGDADDAGGATNLLRVMRREGFHASPRAYRSVVYACARVGLLDEAMTLAKEMQSSSSSAFAAQRQQADVEPPKRLREQEPPSSFNDDCEVENRSIAEETRADEPPALGDGASLGAAASFAERGLEEETEREARNGGVASELVPRRVPSTGAASGEDCVEEGSLVASNDRGNGNLGAVNEDEDGAEFDLAMVYNCIICNFARAATGDGGGAGGVCDHRVGRAPAGASVLAVAEKAAAVAASAVAEETGVGGGERGGRSGPGKDGGRAEARGGDVPGEGLVALLFGVAERAEGSLTDEAANGGVEIDHDEEVA 962
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1206.1319.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LI48_ECTSI9.370e-25586.35Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 315..363
e-value: 7.6E-9
score: 35.5
coord: 662..717
e-value: 0.0014
score: 18.7
coord: 444..505
e-value: 5.7E-11
score: 42.3
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 743..785
e-value: 1.5E-7
score: 31.5
coord: 241..289
e-value: 3.7E-7
score: 30.2
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 530..555
e-value: 0.036
score: 14.3
coord: 584..610
e-value: 0.018
score: 15.3
coord: 895..922
e-value: 0.024
score: 14.8
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 496..527
e-value: 0.001
score: 17.1
coord: 459..493
e-value: 4.5E-7
score: 27.6
coord: 319..353
e-value: 9.2E-4
score: 17.2
coord: 424..457
e-value: 1.4E-4
score: 19.8
coord: 747..779
e-value: 9.1E-6
score: 23.5
coord: 243..277
e-value: 4.9E-4
score: 18.1
coord: 279..306
e-value: 4.0E-4
score: 18.4
coord: 354..387
e-value: 9.2E-5
score: 20.4
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 527..557
score: 7.629
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 422..456
score: 11.246
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 206..240
score: 6.204
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 744..778
score: 11.553
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 492..526
score: 10.501
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 582..616
score: 9.197
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 674..708
score: 9.591
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 352..386
score: 10.797
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 277..307
score: 9.799
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 709..743
score: 8.298
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 457..491
score: 11.959
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 317..351
score: 10.479
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 387..421
score: 8.21
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 892..926
score: 8.955
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 639..673
score: 10.03
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 241..275
score: 9.58
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 857..891
score: 5.875
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 856..937
e-value: 7.4E-8
score: 33.9
coord: 575..685
e-value: 1.6E-17
score: 65.4
coord: 686..797
e-value: 5.1E-24
score: 86.6
coord: 311..396
e-value: 2.1E-19
score: 71.5
coord: 186..310
e-value: 7.7E-24
score: 86.0
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 397..570
e-value: 7.2E-45
score: 155.6
NoneNo IPR availablePANTHERPTHR46128FAMILY NOT NAMEDcoord: 213..306
coord: 639..789
coord: 446..615
coord: 315..457

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1206contigE-siliculosus-1a_F_contig1206:7604..13177 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1206.1319.1mRNA_E-siliculosus-1a_F_contig1206.1319.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1206 7604..13245 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1206.1319.1 ID=prot_E-siliculosus-1a_F_contig1206.1319.1|Name=mRNA_E-siliculosus-1a_F_contig1206.1319.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=1179bp
MVLHAVTPANALVAAPCALQSCHRTVPMRRNPSADYHDATGGTSLSAASS
ISKVSCQHVAVSRGAAAIVERGRRGRRRGRGEITLLGGVASDGWPPDLGG
RRVPSVAASYSVTASAGEGTTAAAAAADSNGENSGGSGGSSSRKSGNSSS
SSSSSSSSSSSNRPAARRIGSSSTPIRTTTTTTGMADPRRRRRLGNVAAA
RQTEQKQKDYLHLIKAAGFRGKWREVAALVSEMGGKGVKGNVYIYNTAIA
AMARCGRPREAEALLTVMLERDSIAPDTISYNSAINGHARCGDLDAARRL
LGRMTELASSGALLHPDQFTYNAVANAAAKRGDAVAAAEVLKTMAEAGVT
PNIITYNSCLAACKAKGDLRRAVVLLEMMREDGIDPDQRSYSAAIATAGI
RGLWEEVQGFLETMREEDLTPDTVTFNTAIKAVADNGQCDVAFSLLAEMK
NEGLTPDQISYNGVLGACGNTGEWKAALRLLEDMRKAGLTPNAYNYSAAM
DACGKAGRQREALALLGHMRKAGVRADTACYNAAIDACSVAMDWTAALQL
LREMKLGVAGAASGGAPGGGGTAGVEAPPPPDVVSYASAITACARARRVD
EALGLLSELRVNEAQAAAAAVRGGLRNGSGRRAGLPVPNVVAYSAGLFAC
LKAGDVARGAELLDEMIAAGLRPNKIHCDTMVAAWSAEGKPERAVALMRR
LQSHGFEPSLYTYETIVWGFAKEANWAAAVRFLAYVLGLGLQPSVRSWDA
AIAACSQAGHWERALALLADMRKQGIRPSKVTYTAAVVGINRRRYTDWAP
ELANIARLLQNGPDSHGGGGGGTAATQGGGKAGADGGGGKGEGEGGGGGS
GGGGGPSPEELDCSIEALGDADDAGGATSLLRVMRREGFHASPRAYRSVV
YACARVGLLDEAMTLAKEMQSSSSSAFAAQRQQAVVERPRRRREQQRPSS
FNDDCEVENRNMAKETPADEPPALGDGASLGAVASFAERGLEEETEREAG
NGGVASELVPRGVPSTGAASGEDCAEEGSLVASNDNSNSNLGAVNEDEDG
AEFDLAMVYNCIICNFARAATGDGGGAGGVCDHRVGKAPAGASVLAVAEK
AAAVAASAVAEGTGVGGGGRGGRSGPGKDGGRAEARGGDVPGEGLVALLF
GVAERAEGSLTDEAANGGVEIDHDEEVA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR002885Pentatricopeptide_repeat