prot_E-siliculosus-1a_F_contig119.1217.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig119.1217.1
Unique Nameprot_E-siliculosus-1a_F_contig119.1217.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length192
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig119.1217.1 vs. uniprot
Match: D7FYT6_ECTSI (N/a n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYT6_ECTSI)

HSP 1 Score: 385 bits (990), Expect = 3.560e-124
Identity = 189/191 (98.95%), Postives = 189/191 (98.95%), Query Frame = 0
Query:    1 MTAVEMLNDDVYIGGEADCNIFTLRRNADAATEEERARLEIQGEFHLGEFVNKFCRGSLLMQSSEVNGPGGMDSPLVKGQPLLFGTVNGMVGTILNLTEDNHRFLAQLQTAMTKVVKGVGGFSHDEWRSFTNGRRTSPSSNFIDGDLVESYLDMPRHNQEEVLRHVDTPVGDKQWAVEDVVVRVEEMQRLH 191
            MTAVEMLNDDVYIGGEADCNIFTLRRNADAATEEERARLEIQGEFHLGEFVNKFCRGSLLMQSSEVN PGGMDSPLVKGQPLLFGTVNGMVGTIL LTEDNHRFLAQLQTAMTKVVKGVGGFSHDEWRSFTNGRRTSPSSNFIDGDLVESYLDMPRHNQEEVLRHVDTPVGDKQWAVEDVVVRVEEMQRLH
Sbjct:  945 MTAVEMLNDDVYIGGEADCNIFTLRRNADAATEEERARLEIQGEFHLGEFVNKFCRGSLLMQSSEVNSPGGMDSPLVKGQPLLFGTVNGMVGTILTLTEDNHRFLAQLQTAMTKVVKGVGGFSHDEWRSFTNGRRTSPSSNFIDGDLVESYLDMPRHNQEEVLRHVDTPVGDKQWAVEDVVVRVEEMQRLH 1135          
BLAST of mRNA_E-siliculosus-1a_F_contig119.1217.1 vs. uniprot
Match: A0A565C2K9_9BRAS (CPSF_A domain-containing protein n=1 Tax=Arabis nemorensis TaxID=586526 RepID=A0A565C2K9_9BRAS)

HSP 1 Score: 188 bits (478), Expect = 7.490e-58
Identity = 88/191 (46.07%), Postives = 137/191 (71.73%), Query Frame = 0
Query:    1 MTAVEMLNDDVYIGGEADCNIFTLRRNADAATEEERARLEIQGEFHLGEFVNKFCRGSLLMQSSEVNGPGGMDSPLVKGQPLLFGTVNGMVGTILNLTEDNHRFLAQLQTAMTKVVKGVGGFSHDEWRSFTNGRRTSPSSNFIDGDLVESYLDMPRHNQEEVLRHVDTPVGDKQWAVEDVVVRVEEMQRLH 191
            M+AVE+L+DD+Y+G E + N+ T+++N++ AT+EER RLE+ GE+HLGEFVN+FC GSL+M+          DS + +   ++FGTVNG++G I +L ++ + FL +LQ+ + KV+KGVGG SH++WRSF N +RT+ + NF+DGDL+ES+LD+ R+  E++ + ++         VED+   VEE+ RLH
Sbjct:    1 MSAVEILDDDIYLGAENNFNLLTVKKNSEGATDEERGRLEVIGEYHLGEFVNRFCHGSLVMRLP--------DSEIGQIPTVIFGTVNGVIGVIASLPQEQYIFLEKLQSCLRKVIKGVGGLSHEQWRSFNNEKRTAEARNFLDGDLIESFLDLSRNKMEDISKSMNV-------QVEDLCKTVEELTRLH 176          
BLAST of mRNA_E-siliculosus-1a_F_contig119.1217.1 vs. uniprot
Match: A0A5K0XSM8_9MAGN (CPSF_A domain-containing protein (Fragment) n=11 Tax=Nymphaea colorata TaxID=210225 RepID=A0A5K0XSM8_9MAGN)

HSP 1 Score: 186 bits (473), Expect = 7.370e-57
Identity = 93/191 (48.69%), Postives = 131/191 (68.59%), Query Frame = 0
Query:    1 MTAVEMLNDDVYIGGEADCNIFTLRRNADAATEEERARLEIQGEFHLGEFVNKFCRGSLLMQSSEVNGPGGMDSPLVKGQPLLFGTVNGMVGTILNLTEDNHRFLAQLQTAMTKVVKGVGGFSHDEWRSFTNGRRTSPSSNFIDGDLVESYLDMPRHNQEEVLRHVDTPVGDKQWAVEDVVVRVEEMQRLH 191
            MTAVE+L+DD+Y+G E + NIFT+R+N DAAT+EER+RLE+ GE+HLGEFVN+F  GSL+M+          DS       ++F T+NG++G I +L  D + FL +LQ  + KV+KGVGG SH++WRSF N ++ S   NF+DGDL+ES+LD+ R+  EE+   +  PV       E++  RVEE+ RLH
Sbjct:   18 MTAVEILDDDIYLGAENNFNIFTVRKNMDAATDEERSRLEVVGEYHLGEFVNRFRHGSLVMRMP--------DSDSGNIPTVIFATINGVIGVIASLPHDQYLFLEKLQMNLNKVIKGVGGLSHEQWRSFCNEKKVSEPRNFLDGDLIESFLDLNRNRMEEISTAMAVPV-------EELCRRVEELTRLH 193          
BLAST of mRNA_E-siliculosus-1a_F_contig119.1217.1 vs. uniprot
Match: A0A1Y1HSK5_KLENI (DNA damage-binding protein 1 n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HSK5_KLENI)

HSP 1 Score: 201 bits (512), Expect = 1.660e-56
Identity = 99/191 (51.83%), Postives = 135/191 (70.68%), Query Frame = 0
Query:    1 MTAVEMLNDDVYIGGEADCNIFTLRRNADAATEEERARLEIQGEFHLGEFVNKFCRGSLLMQSSEVNGPGGMDSPLVKGQPLLFGTVNGMVGTILNLTEDNHRFLAQLQTAMTKVVKGVGGFSHDEWRSFTNGRRTSPSSNFIDGDLVESYLDMPRHNQEEVLRHVDTPVGDKQWAVEDVVVRVEEMQRLH 191
            MTAVE L+DDVY+G E   N+FT+R+N+DAA++EER RLE+ GEFHLGEFVN+F  GSL+M+          DS       ++FGTVNG++G I +L +D   +L +LQ  +T+V+KGVGGFSHD WRSF+N R+T+ + NF+DGDL+E +LD+ R   EEV + +DT        VED+  R+EE+QRLH
Sbjct:  915 MTAVEALDDDVYLGAENSFNLFTVRKNSDAASDEERGRLEVTGEFHLGEFVNRFRPGSLVMRMP--------DSEAAHIPTVIFGTVNGVIGVIASLPQDQFTYLHKLQNCLTEVIKGVGGFSHDHWRSFSNERKTNEARNFLDGDLIEQFLDLRREKMEEVAKKMDT-------TVEDLSKRIEELQRLH 1090          
BLAST of mRNA_E-siliculosus-1a_F_contig119.1217.1 vs. uniprot
Match: A0A7S0T4Q9_9CHLO (Hypothetical protein n=1 Tax=Mantoniella antarctica TaxID=81844 RepID=A0A7S0T4Q9_9CHLO)

HSP 1 Score: 186 bits (473), Expect = 4.250e-56
Identity = 99/192 (51.56%), Postives = 131/192 (68.23%), Query Frame = 0
Query:    1 MTAVEMLNDDVYIGGEADCNIFTLRRNADAATEEERARLEIQGEFHLGEFVNKFCRGSLLMQSSEVNGPGGMDSPLVKGQPLLFGTVNGMVGTILNLTEDNHRFLAQLQTAMTKVVKGVGGFSHDEWRSFTNGRR--TSPSSNFIDGDLVESYLDMPRHNQEEVLRHVDTPVGDKQWAVEDVVVRVEEMQRL 190
            MTAVE+L+DD Y+G E   N+FT+R+NADAAT+EER+RLE+ GE+HLGEFVN+F RGSL+M+          DS       LLFGTVNG++G + +L E+   FL  LQ A+ KVV GVGG SH++WRSF N  R   + + N++DGDLVES+LD+ R   EEV   VDTP+       +++  RVEE+ RL
Sbjct:   72 MTAVEILDDDTYLGAENSFNLFTVRKNADAATDEERSRLEVVGEYHLGEFVNRFRRGSLVMRLP--------DSDHADIPTLLFGTVNGVIGVLASLPEEQFNFLWALQKALNKVVSGVGGLSHEQWRSFHNEHRGRATEAKNYVDGDLVESFLDLRREKAEEVAALVDTPL-------DELTKRVEELVRL 248          
BLAST of mRNA_E-siliculosus-1a_F_contig119.1217.1 vs. uniprot
Match: A0A388JU08_CHABU (Uncharacterized protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388JU08_CHABU)

HSP 1 Score: 199 bits (507), Expect = 7.330e-56
Identity = 98/191 (51.31%), Postives = 136/191 (71.20%), Query Frame = 0
Query:    1 MTAVEMLNDDVYIGGEADCNIFTLRRNADAATEEERARLEIQGEFHLGEFVNKFCRGSLLMQSSEVNGPGGMDSPLVKGQPLLFGTVNGMVGTILNLTEDNHRFLAQLQTAMTKVVKGVGGFSHDEWRSFTNGRRTSPSSNFIDGDLVESYLDMPRHNQEEVLRHVDTPVGDKQWAVEDVVVRVEEMQRLH 191
            MTAVE+L+DD+Y+G E   N+FT+R+N+DAA++EER RLE+ G++HLGEFVN    GSL+M+          DS   +   ++FGTVNG++G I +L ++   FL +LQ  +TKV+KGVGGFSHD+WRSF N RRT+ + NF+DGDL+E++LD+ RH  +EV R +D PV       E++  RVEEM RLH
Sbjct:  873 MTAVEILDDDIYLGAENSFNLFTVRKNSDAASDEERGRLELVGDYHLGEFVNPIRHGSLVMRLP--------DSEASQIPTVIFGTVNGVIGVIASLQQEQFAFLHKLQKCLTKVIKGVGGFSHDQWRSFCNERRTTDAKNFLDGDLIEAFLDLKRHRMDEVSRMMDVPV-------EELCKRVEEMTRLH 1048          
BLAST of mRNA_E-siliculosus-1a_F_contig119.1217.1 vs. uniprot
Match: W2RJ71_PHYPN (DNA damage-binding protein 1 n=13 Tax=Phytophthora TaxID=4783 RepID=W2RJ71_PHYPN)

HSP 1 Score: 199 bits (506), Expect = 1.160e-55
Identity = 103/210 (49.05%), Postives = 145/210 (69.05%), Query Frame = 0
Query:    1 MTAVEMLNDDVYIGGEADCNIFTLRRNADAATEEERARLEIQGEFHLGEFVNKFCRGSLLMQSSE--------VNGPGGMDS--------PLVKGQPLLFGTVNGMVGTILNLTEDNHRFLAQLQTAMTKVVKGVGGFSHDEWRSFTNGRRTSPSSNFIDGDLVESYLDMPRHNQEEVLRHVDTPV---GDKQWAVEDVVVRVEEMQRLH 191
            M+AV +++DD YIG E D N+FT++RN+ AA++EER RLE  GEFHLGEFVN+F  GSL+MQ+S          +GP  M          P V+ Q +LFGTV+GM+G IL +T+D + FL ++Q A+T+VVKGVGGFSH +WR+F N R  S + NFIDGDLVES+LD+P+    +V+  +++     G  Q+ VED+ +R+EE+ +LH
Sbjct:  939 MSAVGIIDDDTYIGSETDFNLFTVQRNSGAASDEERGRLETVGEFHLGEFVNRFRYGSLVMQNSSSASQAPAIASGPTAMVDVGEPAPVVPAVQNQSMLFGTVSGMIGVILPITKDQYAFLLRVQQALTQVVKGVGGFSHKDWRTFENRRSVSEARNFIDGDLVESFLDLPKPQMMKVVDKLNSDGMLDGTDQFTVEDLTLRIEELAQLH 1148          
BLAST of mRNA_E-siliculosus-1a_F_contig119.1217.1 vs. uniprot
Match: A0A444E478_ENSVE (CPSF_A domain-containing protein n=1 Tax=Ensete ventricosum TaxID=4639 RepID=A0A444E478_ENSVE)

HSP 1 Score: 184 bits (467), Expect = 2.250e-55
Identity = 89/191 (46.60%), Postives = 132/191 (69.11%), Query Frame = 0
Query:    1 MTAVEMLNDDVYIGGEADCNIFTLRRNADAATEEERARLEIQGEFHLGEFVNKFCRGSLLMQSSEVNGPGGMDSPLVKGQPLLFGTVNGMVGTILNLTEDNHRFLAQLQTAMTKVVKGVGGFSHDEWRSFTNGRRTSPSSNFIDGDLVESYLDMPRHNQEEVLRHVDTPVGDKQWAVEDVVVRVEEMQRLH 191
            M+AVE+L+DDV++G E + N+FT+R+N+DAAT+EER RLE+ GE+HLGEFVN+F  GSL+M+          DS       ++FGT+NG++G + +L  D + FL +LQ  + KV+KGVGG SH++WRSF N ++T  + NF+DGDL+ES+LD+ R   +E+   +  P+       E++  RVEE+ RLH
Sbjct:   61 MSAVEILDDDVFLGAENNYNLFTVRKNSDAATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLP--------DSEAGHIPTVIFGTINGVIGVVASLPHDQYVFLEKLQANLVKVIKGVGGLSHEQWRSFNNEKKTVDARNFLDGDLIESFLDLSRSRMDEIASSMAVPL-------EELCKRVEELTRLH 236          
BLAST of mRNA_E-siliculosus-1a_F_contig119.1217.1 vs. uniprot
Match: A0A3M6VCW3_9STRA (DNA damage-binding protein 1 n=2 Tax=Peronosporaceae TaxID=4777 RepID=A0A3M6VCW3_9STRA)

HSP 1 Score: 197 bits (502), Expect = 4.030e-55
Identity = 103/212 (48.58%), Postives = 145/212 (68.40%), Query Frame = 0
Query:    1 MTAVEMLNDDVYIGGEADCNIFTLRRNADAATEEERARLEIQGEFHLGEFVNKFCRGSLLMQS----------SEVNGPGGM-----DSP---LVKGQPLLFGTVNGMVGTILNLTEDNHRFLAQLQTAMTKVVKGVGGFSHDEWRSFTNGRRTSPSSNFIDGDLVESYLDMPRHNQEEVLRHVDTPV---GDKQWAVEDVVVRVEEMQRLH 191
            M+AV +++DD YIG E D N+FT++RN+ AA++EER RLE  GEFHLGEFVN+F  GSL+MQ+          S + GP  M      +P    V+ Q +LFGTV+GM+G I ++++D H FL ++Q A+T+VVKGVGGFSH EWR+F N R  S + NFIDGDLVES+LD+P+    +V+  ++      G  Q+ VED+ +R+EE+ +LH
Sbjct:  939 MSAVGIIDDDTYIGSETDFNLFTVQRNSGAASDEERGRLETVGEFHLGEFVNRFRYGSLVMQNNATSAQALAASTLTGPSDMVDVDKSAPGVLAVQNQSMLFGTVSGMIGVIFSISKDQHAFLLRVQQALTEVVKGVGGFSHKEWRTFENRRSASEARNFIDGDLVESFLDLPKPQMIKVVEKLNNDGMLDGTDQYTVEDLTLRIEELAQLH 1150          
BLAST of mRNA_E-siliculosus-1a_F_contig119.1217.1 vs. uniprot
Match: A0A446KEV9_TRITD (DNA damage-binding protein 1 n=3 Tax=Triticum turgidum subsp. durum TaxID=4567 RepID=A0A446KEV9_TRITD)

HSP 1 Score: 193 bits (490), Expect = 8.350e-55
Identity = 94/191 (49.21%), Postives = 135/191 (70.68%), Query Frame = 0
Query:    1 MTAVEMLNDDVYIGGEADCNIFTLRRNADAATEEERARLEIQGEFHLGEFVNKFCRGSLLMQSSEVNGPGGMDSPLVKGQPLLFGTVNGMVGTILNLTEDNHRFLAQLQTAMTKVVKGVGGFSHDEWRSFTNGRRTSPSSNFIDGDLVESYLDMPRHNQEEVLRHVDTPVGDKQWAVEDVVVRVEEMQRLH 191
            MTAVEM++DD+Y+G E   N+FT+R+N+DAAT+EER RLE+ GE+HLGEFVN+F  GSL+M+          DS + +   ++FGT+NG++G I +L  D++ FL +LQT + K +KGVG  SH++WRSF N ++TS + NF+DGDL+ES+LD+ R   EEV + +  PV       E++  RVEE+ RLH
Sbjct:  470 MTAVEMIDDDIYVGAENSYNLFTVRKNSDAATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLP--------DSEMGQIPTVIFGTINGVIGIIASLPHDHYVFLEKLQTTLVKFIKGVGSLSHEQWRSFHNDKKTSEARNFLDGDLIESFLDLNRAKMEEVAKAMAVPV-------EELSKRVEELMRLH 645          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig119.1217.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FYT6_ECTSI3.560e-12498.95N/a n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYT6_ECT... [more]
A0A565C2K9_9BRAS7.490e-5846.07CPSF_A domain-containing protein n=1 Tax=Arabis ne... [more]
A0A5K0XSM8_9MAGN7.370e-5748.69CPSF_A domain-containing protein (Fragment) n=11 T... [more]
A0A1Y1HSK5_KLENI1.660e-5651.83DNA damage-binding protein 1 n=1 Tax=Klebsormidium... [more]
A0A7S0T4Q9_9CHLO4.250e-5651.56Hypothetical protein n=1 Tax=Mantoniella antarctic... [more]
A0A388JU08_CHABU7.330e-5651.31Uncharacterized protein n=1 Tax=Chara braunii TaxI... [more]
W2RJ71_PHYPN1.160e-5549.05DNA damage-binding protein 1 n=13 Tax=Phytophthora... [more]
A0A444E478_ENSVE2.250e-5546.60CPSF_A domain-containing protein n=1 Tax=Ensete ve... [more]
A0A3M6VCW3_9STRA4.030e-5548.58DNA damage-binding protein 1 n=2 Tax=Peronosporace... [more]
A0A446KEV9_TRITD8.350e-5549.21DNA damage-binding protein 1 n=3 Tax=Triticum turg... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 1..96
e-value: 1.5E-22
score: 82.2
NoneNo IPR availableGENE3D3.30.980.30coord: 98..191
e-value: 9.2E-30
score: 104.7
NoneNo IPR availablePANTHERPTHR10644DNA REPAIR/RNA PROCESSING CPSF FAMILYcoord: 1..179
IPR004871Cleavage/polyadenylation specificity factor, A subunit, C-terminalPFAMPF03178CPSF_Acoord: 1..153
e-value: 8.5E-34
score: 117.3
IPR031297DNA damage-binding protein 1PANTHERPTHR10644:SF3DNA DAMAGE-BINDING PROTEIN 1coord: 1..179

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig119contigE-siliculosus-1a_F_contig119:79868..80792 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig119.1217.1mRNA_E-siliculosus-1a_F_contig119.1217.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig119 79491..80823 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig119.1217.1 ID=prot_E-siliculosus-1a_F_contig119.1217.1|Name=mRNA_E-siliculosus-1a_F_contig119.1217.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=192bp
MTAVEMLNDDVYIGGEADCNIFTLRRNADAATEEERARLEIQGEFHLGEF
VNKFCRGSLLMQSSEVNGPGGMDSPLVKGQPLLFGTVNGMVGTILNLTED
NHRFLAQLQTAMTKVVKGVGGFSHDEWRSFTNGRRTSPSSNFIDGDLVES
YLDMPRHNQEEVLRHVDTPVGDKQWAVEDVVVRVEEMQRLH*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR031297DDB1
IPR004871Cleavage/polyA-sp_fac_asu_C
IPR015943WD40/YVTN_repeat-like_dom_sf