prot_E-siliculosus-1a_F_contig1188.1200.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1188.1200.1
Unique Nameprot_E-siliculosus-1a_F_contig1188.1200.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length87
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1188.1200.1 vs. uniprot
Match: D8LDJ5_ECTSI (Ubiquitinyl hydrolase 1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LDJ5_ECTSI)

HSP 1 Score: 100 bits (250), Expect = 2.720e-23
Identity = 49/53 (92.45%), Postives = 52/53 (98.11%), Query Frame = 0
Query:   18 MSSLCGQHCINNLVQAASYSAADLADIAHELDEQERQHMLAAGSDTPDALKYV 70
            MSSLCGQHCINNLVQAASYSAADLADIA ELD+QERQHMLAAGSDTPDALK++
Sbjct:    1 MSSLCGQHCINNLVQAASYSAADLADIALELDDQERQHMLAAGSDTPDALKFL 53          
BLAST of mRNA_E-siliculosus-1a_F_contig1188.1200.1 vs. uniprot
Match: A0A836CJ83_9STRA (Ubiquitinyl hydrolase 1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJ83_9STRA)

HSP 1 Score: 91.3 bits (225), Expect = 5.670e-21
Identity = 41/59 (69.49%), Postives = 48/59 (81.36%), Query Frame = 0
Query:   11 WVYHEKQMSSLCGQHCINNLVQAASYSAADLADIAHELDEQERQHMLAAGSDTPDALKY 69
            W+YHEKQ SSLCGQHC+NNL+QA  ++A DLADIAH LD +ERQ ML  G  TPDALK+
Sbjct:    3 WIYHEKQESSLCGQHCLNNLLQACIFTAPDLADIAHVLDAKERQLMLELGHSTPDALKF 61          
BLAST of mRNA_E-siliculosus-1a_F_contig1188.1200.1 vs. uniprot
Match: A0A7S4DEZ6_HETAK (Ubiquitinyl hydrolase 1 (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DEZ6_HETAK)

HSP 1 Score: 82.4 bits (202), Expect = 4.640e-18
Identity = 35/62 (56.45%), Postives = 47/62 (75.81%), Query Frame = 0
Query:    9 DLWVYHEKQMSSLCGQHCINNLVQAASYSAADLADIAHELDEQERQHMLAAGSDTPDALKYV 70
            + W+YHEKQ S LCGQHC+NNL+Q   + A  LA I  ELD +ER+ ML AG+DTP+AL+++
Sbjct:    9 ETWIYHEKQFSLLCGQHCLNNLLQGPYFDAPGLAQIGQELDAEERRVMLEAGADTPEALRFL 70          
BLAST of mRNA_E-siliculosus-1a_F_contig1188.1200.1 vs. uniprot
Match: A0A7S2SLM5_9STRA (Ubiquitinyl hydrolase 1 n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SLM5_9STRA)

HSP 1 Score: 85.1 bits (209), Expect = 1.190e-17
Identity = 39/66 (59.09%), Postives = 49/66 (74.24%), Query Frame = 0
Query:    5 SSDGDLWVYHEKQMSSLCGQHCINNLVQAASYSAADLADIAHELDEQERQHMLAAGSDTPDALKYV 70
            +S  D WVYHE+Q S+LCGQHC+NNL+Q   +S  DLADIA E+D  ERQ ML  G  TP+ALK++
Sbjct:    9 ASMADGWVYHERQESALCGQHCLNNLLQGTYFSPGDLADIAAEMDRLERQMMLEMGDATPEALKFL 74          
BLAST of mRNA_E-siliculosus-1a_F_contig1188.1200.1 vs. uniprot
Match: D3BL88_POLPP (Ubiquitinyl hydrolase 1 n=1 Tax=Polysphondylium pallidum (strain ATCC 26659 / Pp 5 / PN500) TaxID=670386 RepID=D3BL88_POLPP)

HSP 1 Score: 73.9 bits (180), Expect = 7.470e-14
Identity = 32/60 (53.33%), Postives = 47/60 (78.33%), Query Frame = 0
Query:   10 LWVYHEKQMSSLCGQHCINNLVQAASYSAADLADIAHELDEQERQHMLAAGSDTPDALKY 69
            ++VY E Q++SLCG HC+N L+Q + ++A DLA++AHELDE+ER  ML AG D+ D +K+
Sbjct:    2 VYVYFEHQVASLCGVHCLNTLLQGSYFTAVDLANVAHELDEKERDVMLQAGVDSSDFIKF 61          
BLAST of mRNA_E-siliculosus-1a_F_contig1188.1200.1 vs. uniprot
Match: A0A8J4PS66_9MYCE (Ubiquitinyl hydrolase 1 n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4PS66_9MYCE)

HSP 1 Score: 73.6 bits (179), Expect = 1.150e-13
Identity = 34/66 (51.52%), Postives = 47/66 (71.21%), Query Frame = 0
Query:    5 SSDGDLWVYHEKQMSSLCGQHCINNLVQAASYSAADLADIAHELDEQERQHMLAAGSDTPDALKYV 70
            S+ G   VYHEKQ++SLCG HC+N L+Q + ++  DLA +A ELD+QER+ M   G +T D LK+V
Sbjct:    2 SNPGSTVVYHEKQVASLCGVHCLNTLLQGSYFTEIDLAHVAQELDKQEREMMSENGFETKDFLKFV 67          
BLAST of mRNA_E-siliculosus-1a_F_contig1188.1200.1 vs. uniprot
Match: UPI000644D6F3 (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI000644D6F3)

HSP 1 Score: 72.4 bits (176), Expect = 2.630e-13
Identity = 30/60 (50.00%), Postives = 47/60 (78.33%), Query Frame = 0
Query:   10 LWVYHEKQMSSLCGQHCINNLVQAASYSAADLADIAHELDEQERQHMLAAGSDTPDALKY 69
            ++VY EKQ++SLCG HC+N+L+Q + ++A DLA++AH+LD++E   M  AG DT D +K+
Sbjct:    2 VYVYFEKQLASLCGVHCLNSLLQGSYFTAVDLANVAHQLDQEEMDVMSQAGMDTSDFIKF 61          
BLAST of mRNA_E-siliculosus-1a_F_contig1188.1200.1 vs. uniprot
Match: A0A5N5T5Y4_9CRUS (Ubiquitinyl hydrolase 1 n=1 Tax=Armadillidium nasatum TaxID=96803 RepID=A0A5N5T5Y4_9CRUS)

HSP 1 Score: 67.8 bits (164), Expect = 4.810e-13
Identity = 27/62 (43.55%), Postives = 46/62 (74.19%), Query Frame = 0
Query:   11 WVYHEKQMSSLCGQHCINNLVQAASYSAADLADIAHELDEQERQHMLAAGSDTPDALKYVRL 72
            ++YHEKQ  SLCGQHC+NNL+Q   +SA +LA+IA ++D++E + M   G++T +  +++ +
Sbjct:   24 YIYHEKQEGSLCGQHCLNNLLQDQYFSAVELAEIAQQMDQEETRRMAELGTNTSEFRQFLEV 85          
BLAST of mRNA_E-siliculosus-1a_F_contig1188.1200.1 vs. uniprot
Match: A0A7I8VG35_9ANNE (Ubiquitinyl hydrolase 1 n=1 Tax=Dimorphilus gyrociliatus TaxID=2664684 RepID=A0A7I8VG35_9ANNE)

HSP 1 Score: 71.2 bits (173), Expect = 6.380e-13
Identity = 31/52 (59.62%), Postives = 40/52 (76.92%), Query Frame = 0
Query:   12 VYHEKQMSSLCGQHCINNLVQAASYSAADLADIAHELDEQERQHMLAAGSDT 63
            ++HEKQ  SLCGQHC+NNL+Q A +SA DLAD+A +LDE ER H+ +  S T
Sbjct:    4 IFHEKQEGSLCGQHCLNNLLQGAYFSAVDLADLASQLDETERSHLGSNSSST 55          
BLAST of mRNA_E-siliculosus-1a_F_contig1188.1200.1 vs. uniprot
Match: A0A1E7EJP0_9STRA (Ubiquitinyl hydrolase 1 n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EJP0_9STRA)

HSP 1 Score: 69.3 bits (168), Expect = 7.730e-13
Identity = 29/52 (55.77%), Postives = 41/52 (78.85%), Query Frame = 0
Query:    5 SSDGDLWVYHEKQMSSLCGQHCINNLVQAASYSAADLADIAHELDEQERQHM 56
            SS+ + W+YHEKQ + LCGQH +NNLVQA ++SA  LA+IA++LD+ E  +M
Sbjct:    2 SSETEYWIYHEKQQALLCGQHALNNLVQANAFSAGQLAEIAYQLDQMELDYM 53          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1188.1200.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LDJ5_ECTSI2.720e-2392.45Ubiquitinyl hydrolase 1 n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CJ83_9STRA5.670e-2169.49Ubiquitinyl hydrolase 1 n=1 Tax=Tribonema minus Ta... [more]
A0A7S4DEZ6_HETAK4.640e-1856.45Ubiquitinyl hydrolase 1 (Fragment) n=1 Tax=Heteros... [more]
A0A7S2SLM5_9STRA1.190e-1759.09Ubiquitinyl hydrolase 1 n=2 Tax=Rhizochromulina ma... [more]
D3BL88_POLPP7.470e-1453.33Ubiquitinyl hydrolase 1 n=1 Tax=Polysphondylium pa... [more]
A0A8J4PS66_9MYCE1.150e-1351.52Ubiquitinyl hydrolase 1 n=1 Tax=Polysphondylium vi... [more]
UPI000644D6F32.630e-1350.00hypothetical protein n=1 Tax=Acytostelium subglobo... [more]
A0A5N5T5Y4_9CRUS4.810e-1343.55Ubiquitinyl hydrolase 1 n=1 Tax=Armadillidium nasa... [more]
A0A7I8VG35_9ANNE6.380e-1359.62Ubiquitinyl hydrolase 1 n=1 Tax=Dimorphilus gyroci... [more]
A0A1E7EJP0_9STRA7.730e-1355.77Ubiquitinyl hydrolase 1 n=1 Tax=Fragilariopsis cyl... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR01233JOSEPHINcoord: 52..73
score: 22.73
coord: 13..36
score: 58.33
NoneNo IPR availableGENE3D1.10.287.10coord: 35..71
e-value: 6.4E-9
score: 37.5
NoneNo IPR availablePANTHERPTHR14159:SF0ATAXIN-3coord: 11..67
IPR006155Josephin domainPFAMPF02099Josephincoord: 17..70
e-value: 5.3E-14
score: 52.7
IPR006155Josephin domainPROSITEPS50957JOSEPHINcoord: 9..86
score: 13.809
IPR033865Machado-Joseph disease proteinPANTHERPTHR14159MACHADO-JOSEPH DISEASE PROTEIN 1 ATAXIN-3coord: 11..67

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1188contigE-siliculosus-1a_F_contig1188:31569..33628 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1188.1200.1mRNA_E-siliculosus-1a_F_contig1188.1200.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1188 31535..33765 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1188.1200.1 ID=prot_E-siliculosus-1a_F_contig1188.1200.1|Name=mRNA_E-siliculosus-1a_F_contig1188.1200.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=87bp
MAPPSSDGDLWVYHEKQMSSLCGQHCINNLVQAASYSAADLADIAHELDE
QERQHMLAAGSDTPDALKYVRLLVCFSPANRVMYLW*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR033865Ataxin-3
IPR006155Josephin