prot_E-siliculosus-1a_F_contig118.1163.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig118.1163.1
Unique Nameprot_E-siliculosus-1a_F_contig118.1163.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length87
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig118.1163.1 vs. uniprot
Match: A0A6H5L2K9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2K9_9PHAE)

HSP 1 Score: 88.2 bits (217), Expect = 4.620e-21
Identity = 43/56 (76.79%), Postives = 48/56 (85.71%), Query Frame = 0 
Query:   31 GLEWLACACHKSERTVQKFVGTPGLKKSVSAFSKVATHLHKSALSKVVVQDAQQVS 86
            G+EWL  ACHK+ERTVQ FVG PGLKKS+SAF+KVATHL KSAL K V QDAQQ+S
Sbjct:   34 GMEWLGRACHKAERTVQNFVGPPGLKKSISAFTKVATHLQKSALWKGVFQDAQQLS 89
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BLAST of mRNA_E-siliculosus-1a_F_contig118.1163.1 vs. uniprot
Match: D7G6P8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6P8_ECTSI)

HSP 1 Score: 70.9 bits (172), Expect = 3.180e-14
Identity = 32/53 (60.38%), Postives = 41/53 (77.36%), Query Frame = 0 
Query:   32 LEWLACACHKSERTVQKFVGTPGLKKSVSAFSKVATHLHKSALSKVVVQDAQQ 84
            ++WL C CHK+E TVQKFV TPGLK+++  F+KVA HLHKSALS     +AQ+
Sbjct:   34 IQWLGCGCHKTELTVQKFVNTPGLKETLKRFTKVAGHLHKSALSLGAFFEAQK 86
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig118.1163.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L2K9_9PHAE4.620e-2176.79Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G6P8_ECTSI3.180e-1460.38Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig118contigE-siliculosus-1a_F_contig118:76375..76635 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig118.1163.1mRNA_E-siliculosus-1a_F_contig118.1163.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig118 76375..76635 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig118.1163.1 ID=prot_E-siliculosus-1a_F_contig118.1163.1|Name=mRNA_E-siliculosus-1a_F_contig118.1163.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=87bp
VERAWNCQDRDLHDDGHGCEHEERGRRAHAGLEWLACACHKSERTVQKFV
GTPGLKKSVSAFSKVATHLHKSALSKVVVQDAQQVS*
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